RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 MEIS3P2A8K0S8 358 aa7.23□□□□□ -1.25
CCDC38-206ENST00000548771 NFIBO00712 420 aa7.23□□□□□ -1.25
CCDC38-206ENST00000548771 TRHRP34981 398 aaPredicted RBP7.23□□□□□ -1.25
CCDC38-206ENST00000548771 CCNFP41002 786 aa7.23□□□□□ -1.25
CCDC38-206ENST00000548771 SEZ6Q53EL9 994 aa7.23□□□□□ -1.25
CCDC38-206ENST00000548771 DAGLBQ8NCG7 672 aa7.23□□□□□ -1.25
CCDC38-206ENST00000548771 SHISA4Q96DD7 197 aa7.23□□□□□ -1.25
CCDC38-206ENST00000548771 FITM1A5D6W6 292 aa7.22□□□□□ -1.25
CCDC38-206ENST00000548771 NOTOA8MTQ0 251 aa7.22□□□□□ -1.25
CCDC38-206ENST00000548771 TNFRSF10CO14798 259 aa7.22□□□□□ -1.25
CCDC38-206ENST00000548771 NME1P15531 152 aaKnown RBP7.22□□□□□ -1.25
CCDC38-206ENST00000548771 RAG1P15918 1043 aa7.22□□□□□ -1.25
CCDC38-206ENST00000548771 LTKP29376 864 aa7.22□□□□□ -1.25
CCDC38-206ENST00000548771 POLR2BP30876 1174 aaKnown RBP7.22□□□□□ -1.25
CCDC38-206ENST00000548771 NMIQ13287 307 aaPredicted RBP7.22□□□□□ -1.25
CCDC38-206ENST00000548771 NLRC3Q7RTR2 1065 aa7.22□□□□□ -1.25
CCDC38-206ENST00000548771 DHX38Q92620 1227 aaKnown RBP7.22□□□□□ -1.25
CCDC38-206ENST00000548771 RNF32Q9H0A6 362 aa7.22□□□□□ -1.25
CCDC38-206ENST00000548771 ANTXR1Q9H6X2 564 aa7.22□□□□□ -1.25
CCDC38-206ENST00000548771 C19orf44Q9H6X5 657 aa7.22□□□□□ -1.25
CCDC38-206ENST00000548771 MED14OSP0DP75 135 aa7.21□□□□□ -1.26
CCDC38-206ENST00000548771 RNF4P78317 190 aa7.21□□□□□ -1.26
CCDC38-206ENST00000548771 SNW1Q13573 536 aaKnown RBP7.21□□□□□ -1.26
CCDC38-206ENST00000548771 GK5Q6ZS86 529 aa7.21□□□□□ -1.26
CCDC38-206ENST00000548771 OXR1Q8N573 874 aa7.21□□□□□ -1.26
CCDC38-206ENST00000548771 TMEM87AQ8NBN3 555 aa7.21□□□□□ -1.26
CCDC38-206ENST00000548771 NKD1Q969G9 470 aa7.21□□□□□ -1.26
CCDC38-206ENST00000548771 TCTN2Q96GX1 697 aa7.21□□□□□ -1.26
CCDC38-206ENST00000548771 BACH2Q9BYV9 841 aa7.21□□□□□ -1.26
CCDC38-206ENST00000548771 ADAMTS20P59510 1910 aa7.21□□□□□ -1.26
CCDC38-206ENST00000548771 EFEMP2O95967 443 aa7.2□□□□□ -1.26
CCDC38-206ENST00000548771 ZNF165P49910 485 aa7.2□□□□□ -1.26
CCDC38-206ENST00000548771 RAD51AP2Q09MP3 1159 aa7.2□□□□□ -1.26
CCDC38-206ENST00000548771 APOBRQ0VD83 1088 aa7.2□□□□□ -1.26
CCDC38-206ENST00000548771 SNX17Q15036 470 aa7.2□□□□□ -1.26
CCDC38-206ENST00000548771 RNF111Q6ZNA4 994 aa7.2□□□□□ -1.26
CCDC38-206ENST00000548771 ATG14Q6ZNE5 492 aa7.2□□□□□ -1.26
CCDC38-206ENST00000548771 TMC3Q7Z5M5 1100 aa7.2□□□□□ -1.26
CCDC38-206ENST00000548771 TMEM192Q8IY95 271 aa7.2□□□□□ -1.26
CCDC38-206ENST00000548771 C20orf173Q96LM9 149 aa7.2□□□□□ -1.26
CCDC38-206ENST00000548771 TMEM82A0PJX8 343 aa7.19□□□□□ -1.26
CCDC38-206ENST00000548771 CTSWP56202 376 aa7.19□□□□□ -1.26
CCDC38-206ENST00000548771 FANCCQ00597 558 aa7.19□□□□□ -1.26
CCDC38-206ENST00000548771 CHRNEQ04844 493 aa7.19□□□□□ -1.26
CCDC38-206ENST00000548771 KCNA10Q16322 511 aa7.19□□□□□ -1.26
CCDC38-206ENST00000548771 LRRFIP1Q32MZ4 808 aaKnown RBP7.19□□□□□ -1.26
CCDC38-206ENST00000548771 INTS3Q68E01 1043 aaKnown RBP7.19□□□□□ -1.26
CCDC38-206ENST00000548771 AMIGO3Q86WK7 504 aa7.19□□□□□ -1.26
CCDC38-206ENST00000548771 SPPL2CQ8IUH8 684 aa7.19□□□□□ -1.26
CCDC38-206ENST00000548771 ZNF655Q8N720 491 aaPredicted RBP7.19□□□□□ -1.26
CCDC38-206ENST00000548771 ANKS4BQ8N8V4 417 aa7.19□□□□□ -1.26
CCDC38-206ENST00000548771 LINC00116Q8NCU8 138 aa7.19□□□□□ -1.26
CCDC38-206ENST00000548771 CWC22Q9HCG8 908 aaKnown RBP7.19□□□□□ -1.26
CCDC38-206ENST00000548771 CD320Q9NPF0 282 aa7.19□□□□□ -1.26
CCDC38-206ENST00000548771 DCP1AQ9NPI6 582 aaPredicted RBP7.19□□□□□ -1.26
CCDC38-206ENST00000548771 YBX2Q9Y2T7 364 aaKnown RBP7.19□□□□□ -1.26
CCDC38-206ENST00000548771 PSPNO60542 156 aa7.18□□□□□ -1.26
CCDC38-206ENST00000548771 DUSP4Q13115 394 aa7.18□□□□□ -1.26
CCDC38-206ENST00000548771 CLEC16AQ2KHT3 1053 aa7.18□□□□□ -1.26
CCDC38-206ENST00000548771 TMCO4Q5TGY1 634 aa7.18□□□□□ -1.26
CCDC38-206ENST00000548771 IRF2BP1Q8IU81 584 aa7.18□□□□□ -1.26
CCDC38-206ENST00000548771 KIAA0825Q8IV33 1275 aa7.18□□□□□ -1.26
CCDC38-206ENST00000548771 SLC9A7Q96T83 725 aa7.18□□□□□ -1.26
CCDC38-206ENST00000548771 SPON2Q9BUD6 331 aa7.18□□□□□ -1.26
CCDC38-206ENST00000548771 PRDM14Q9GZV8 571 aa7.18□□□□□ -1.26
CCDC38-206ENST00000548771 EPB41L4BQ9H329 900 aa7.18□□□□□ -1.26
CCDC38-206ENST00000548771 METTL5Q9NRN9 209 aaKnown RBP7.18□□□□□ -1.26
CCDC38-206ENST00000548771 SIGLEC6O43699 453 aa7.17□□□□□ -1.26
CCDC38-206ENST00000548771 TMEM253P0C7T8 217 aa7.17□□□□□ -1.26
CCDC38-206ENST00000548771 ACRP10323 421 aa7.17□□□□□ -1.26
CCDC38-206ENST00000548771 HOXA5P20719 270 aa7.17□□□□□ -1.26
CCDC38-206ENST00000548771 GLDCP23378 1020 aa7.17□□□□□ -1.26
CCDC38-206ENST00000548771 BBS9Q3SYG4 887 aa7.17□□□□□ -1.26
CCDC38-206ENST00000548771 FOXP3Q9BZS1 431 aa7.17□□□□□ -1.26
CCDC38-206ENST00000548771 ASCC2Q9H1I8 757 aaPredicted RBP7.17□□□□□ -1.26
CCDC38-206ENST00000548771 RAPGEFL1Q9UHV5 662 aa7.17□□□□□ -1.26
CCDC38-206ENST00000548771 ZNRF3Q9ULT6 936 aa7.17□□□□□ -1.26
CCDC38-206ENST00000548771 JAG2Q9Y219 1238 aa7.17□□□□□ -1.26
CCDC38-206ENST00000548771 ETV2O00321 342 aaPredicted RBP7.16□□□□□ -1.26
CCDC38-206ENST00000548771 CLEC3AO75596 197 aa7.16□□□□□ -1.26
CCDC38-206ENST00000548771 PRAMEF1O95521 474 aa7.16□□□□□ -1.26
CCDC38-206ENST00000548771 MCM4P33991 863 aa7.16□□□□□ -1.26
CCDC38-206ENST00000548771 ZNF76P36508 570 aa7.16□□□□□ -1.26
CCDC38-206ENST00000548771 CEBPAP49715 358 aaPredicted RBP7.16□□□□□ -1.26
CCDC38-206ENST00000548771 NLRX1Q86UT6 975 aa7.16□□□□□ -1.26
CCDC38-206ENST00000548771 SLC26A8Q96RN1 970 aa7.16□□□□□ -1.26
CCDC38-206ENST00000548771 SLC6A17Q9H1V8 727 aa7.16□□□□□ -1.26
CCDC38-206ENST00000548771 ZNF552Q9H707 407 aaPredicted RBP7.16□□□□□ -1.26
CCDC38-206ENST00000548771 TCFL5Q9UL49 500 aa7.16□□□□□ -1.26
CCDC38-206ENST00000548771 MYOCOSA0A1B0GUC4 107 aa7.15□□□□□ -1.26
CCDC38-206ENST00000548771 PEX10O60683 326 aa7.15□□□□□ -1.26
CCDC38-206ENST00000548771 KIR2DL1P43626 348 aaPredicted RBP7.15□□□□□ -1.26
CCDC38-206ENST00000548771 KIR2DL2P43627 348 aaPredicted RBP7.15□□□□□ -1.26
CCDC38-206ENST00000548771 RACK1P63244 317 aaKnown RBP7.15□□□□□ -1.26
CCDC38-206ENST00000548771 TAB3Q8N5C8 712 aaPredicted RBP7.15□□□□□ -1.26
CCDC38-206ENST00000548771 INTS4Q96HW7 963 aaKnown RBP7.15□□□□□ -1.26
CCDC38-206ENST00000548771 MAP6Q96JE9 813 aa7.15□□□□□ -1.26
CCDC38-206ENST00000548771 ZNF512BQ96KM6 892 aaPredicted RBP7.15□□□□□ -1.26
CCDC38-206ENST00000548771 MCOLN1Q9GZU1 580 aa7.15□□□□□ -1.26
CCDC38-206ENST00000548771 BCL11AQ9H165 835 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms