RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 ARHGEF10LQ9HCE6 1279 aa19.87■□□□□ 0.77
SSH1-208ENST00000548522 PDLIM7Q9NR12 457 aa19.87■□□□□ 0.77
SSH1-208ENST00000548522 CDK8P49336 464 aa19.86■□□□□ 0.77
SSH1-208ENST00000548522 C12orf60Q5U649 245 aa19.86■□□□□ 0.77
SSH1-208ENST00000548522 FAM109BQ6ICB4 259 aaPredicted RBP19.86■□□□□ 0.77
SSH1-208ENST00000548522 ABRAQ8N0Z2 381 aa19.86■□□□□ 0.77
SSH1-208ENST00000548522 BADQ92934 168 aa19.86■□□□□ 0.77
SSH1-208ENST00000548522 LENG1Q96BZ8 264 aaPredicted RBP19.86■□□□□ 0.77
SSH1-208ENST00000548522 PARP14Q460N5 1801 aa19.86■□□□□ 0.77
SSH1-208ENST00000548522 BAZ2AQ9UIF9 1905 aaKnown RBP19.85■□□□□ 0.77
SSH1-208ENST00000548522 TRIM43BA6NCK2 446 aa19.85■□□□□ 0.77
SSH1-208ENST00000548522 USP17L12C9JPN9 530 aa19.85■□□□□ 0.77
SSH1-208ENST00000548522 USP17L21D6R901 530 aa19.85■□□□□ 0.77
SSH1-208ENST00000548522 WDR46O15213 610 aaKnown RBP19.85■□□□□ 0.77
SSH1-208ENST00000548522 EEF2P13639 858 aaKnown RBP19.85■□□□□ 0.77
SSH1-208ENST00000548522 TAL1P17542 331 aaPredicted RBP19.85■□□□□ 0.77
SSH1-208ENST00000548522 TRIM43Q96BQ3 446 aaPredicted RBP19.85■□□□□ 0.77
SSH1-208ENST00000548522 COL25A1Q9BXS0 654 aaPredicted RBP19.85■□□□□ 0.77
SSH1-208ENST00000548522 COG6Q9Y2V7 657 aa19.85■□□□□ 0.77
SSH1-208ENST00000548522 FCER1AP12319 257 aa19.84■□□□□ 0.77
SSH1-208ENST00000548522 ITGB8P26012 769 aa19.84■□□□□ 0.77
SSH1-208ENST00000548522 C16orf86Q6ZW13 317 aa19.84■□□□□ 0.77
SSH1-208ENST00000548522 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.84■□□□□ 0.77
SSH1-208ENST00000548522 MMP19Q99542 508 aa19.84■□□□□ 0.77
SSH1-208ENST00000548522 SH2D4AQ9H788 454 aa19.84■□□□□ 0.77
SSH1-208ENST00000548522 ATP8A2Q9NTI2 1148 aa19.84■□□□□ 0.77
SSH1-208ENST00000548522 ZBTB40Q9NUA8 1239 aa19.84■□□□□ 0.77
SSH1-208ENST00000548522 ZBED9Q6R2W3 1325 aa19.83■□□□□ 0.77
SSH1-208ENST00000548522 PGK1P00558 417 aa19.83■□□□□ 0.77
SSH1-208ENST00000548522 ZNF697Q5TEC3 545 aa19.83■□□□□ 0.77
SSH1-208ENST00000548522 HAUS7Q99871 368 aa19.83■□□□□ 0.77
SSH1-208ENST00000548522 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.83■□□□□ 0.77
SSH1-208ENST00000548522 XPNPEP3Q9NQH7 507 aa19.83■□□□□ 0.77
SSH1-208ENST00000548522 SLC5A4Q9NY91 659 aa19.83■□□□□ 0.77
SSH1-208ENST00000548522 ADAMTS5Q9UNA0 930 aa19.83■□□□□ 0.77
SSH1-208ENST00000548522 MYH8P13535 1937 aa19.82■□□□□ 0.76
SSH1-208ENST00000548522 ATP5JP18859 108 aa19.82■□□□□ 0.76
SSH1-208ENST00000548522 TLE2Q04725 743 aa19.82■□□□□ 0.76
SSH1-208ENST00000548522 FAM83BQ5T0W9 1011 aa19.82■□□□□ 0.76
SSH1-208ENST00000548522 RIOX2Q8IUF8 465 aa19.82■□□□□ 0.76
SSH1-208ENST00000548522 RPAP2Q8IXW5 612 aaPredicted RBP19.82■□□□□ 0.76
SSH1-208ENST00000548522 REPS2Q8NFH8 660 aa19.82■□□□□ 0.76
SSH1-208ENST00000548522 CCDC17Q96LX7 622 aa19.82■□□□□ 0.76
SSH1-208ENST00000548522 NUP88Q99567 741 aaPredicted RBP19.82■□□□□ 0.76
SSH1-208ENST00000548522 PUS7LQ9H0K6 701 aaKnown RBP19.82■□□□□ 0.76
SSH1-208ENST00000548522 ZNF214Q9UL59 606 aaPredicted RBP19.82■□□□□ 0.76
SSH1-208ENST00000548522 PHF24Q9UPV7 400 aa19.82■□□□□ 0.76
SSH1-208ENST00000548522 SLC4A4Q9Y6R1 1079 aa19.82■□□□□ 0.76
SSH1-208ENST00000548522 COL11A1P12107 1806 aaPredicted RBP19.81■□□□□ 0.76
SSH1-208ENST00000548522 VWA5AO00534 786 aa19.81■□□□□ 0.76
SSH1-208ENST00000548522 RAD21O60216 631 aa19.81■□□□□ 0.76
SSH1-208ENST00000548522 HMMRO75330 724 aa19.81■□□□□ 0.76
SSH1-208ENST00000548522 EPHB4P54760 987 aa19.81■□□□□ 0.76
SSH1-208ENST00000548522 ZNF792Q3KQV3 632 aa19.81■□□□□ 0.76
SSH1-208ENST00000548522 CTR9Q6PD62 1173 aa19.81■□□□□ 0.76
SSH1-208ENST00000548522 CDX2Q99626 313 aaPredicted RBP19.81■□□□□ 0.76
SSH1-208ENST00000548522 TINF2Q9BSI4 451 aa19.81■□□□□ 0.76
SSH1-208ENST00000548522 TTYH1Q9H313 450 aaPredicted RBP19.81■□□□□ 0.76
SSH1-208ENST00000548522 PPP1R9AQ9ULJ8 1098 aa19.81■□□□□ 0.76
SSH1-208ENST00000548522 RAB11FIP3O75154 756 aa19.8■□□□□ 0.76
SSH1-208ENST00000548522 SLC25A27O95847 323 aa19.8■□□□□ 0.76
SSH1-208ENST00000548522 RARBP10826 455 aa19.8■□□□□ 0.76
SSH1-208ENST00000548522 UBE3CQ15386 1083 aa19.8■□□□□ 0.76
SSH1-208ENST00000548522 C1orf53Q5VUE5 145 aa19.8■□□□□ 0.76
SSH1-208ENST00000548522 STK11IPQ8N1F8 1099 aa19.8■□□□□ 0.76
SSH1-208ENST00000548522 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.8■□□□□ 0.76
SSH1-208ENST00000548522 KANSL2Q9H9L4 492 aa19.8■□□□□ 0.76
SSH1-208ENST00000548522 ROBO3Q96MS0 1386 aa19.8■□□□□ 0.76
SSH1-208ENST00000548522 A0A1W2PQ45 241 aaPredicted RBP19.79■□□□□ 0.76
SSH1-208ENST00000548522 A0A1W2PQY0 241 aa19.79■□□□□ 0.76
SSH1-208ENST00000548522 SMARCA5O60264 1052 aaPredicted RBP19.79■□□□□ 0.76
SSH1-208ENST00000548522 ZNF865P0CJ78 1059 aaPredicted RBP19.79■□□□□ 0.76
SSH1-208ENST00000548522 STAT3P40763 770 aa19.79■□□□□ 0.76
SSH1-208ENST00000548522 KCTD2Q14681 263 aa19.79■□□□□ 0.76
SSH1-208ENST00000548522 DDX19BQ9UMR2 479 aa19.79■□□□□ 0.76
SSH1-208ENST00000548522 MUC3AQ02505 3323 aa19.79■□□□□ 0.76
SSH1-208ENST00000548522 PQBP1O60828 265 aaKnown RBP19.78■□□□□ 0.76
SSH1-208ENST00000548522 AMOTL1Q8IY63 956 aa19.78■□□□□ 0.76
SSH1-208ENST00000548522 MYLIPQ8WY64 445 aa19.78■□□□□ 0.76
SSH1-208ENST00000548522 SEMA6BQ9H3T3 888 aa19.78■□□□□ 0.76
SSH1-208ENST00000548522 GOPCQ9HD26 462 aa19.78■□□□□ 0.76
SSH1-208ENST00000548522 NRBP1Q9UHY1 535 aa19.78■□□□□ 0.76
SSH1-208ENST00000548522 GREB1LQ9C091 1923 aaPredicted RBP19.77■□□□□ 0.76
SSH1-208ENST00000548522 ADAMTS4O75173 837 aa19.77■□□□□ 0.76
SSH1-208ENST00000548522 CLTBP09497 229 aa19.77■□□□□ 0.76
SSH1-208ENST00000548522 IRX5P78411 483 aaPredicted RBP19.77■□□□□ 0.76
SSH1-208ENST00000548522 RIPK3Q9Y572 518 aa19.77■□□□□ 0.76
SSH1-208ENST00000548522 SYNRGQ9UMZ2 1314 aa19.76■□□□□ 0.75
SSH1-208ENST00000548522 MYADML2A6NDP7 307 aa19.76■□□□□ 0.75
SSH1-208ENST00000548522 RASA1P20936 1047 aa19.76■□□□□ 0.75
SSH1-208ENST00000548522 RNF180Q86T96 592 aa19.76■□□□□ 0.75
SSH1-208ENST00000548522 MAFAQ8NHW3 353 aaPredicted RBP19.76■□□□□ 0.75
SSH1-208ENST00000548522 DDRGK1Q96HY6 314 aa19.76■□□□□ 0.75
SSH1-208ENST00000548522 ARPP21Q9UBL0 812 aaPredicted RBP19.76■□□□□ 0.75
SSH1-208ENST00000548522 SMCHD1A6NHR9 2005 aa19.75■□□□□ 0.75
SSH1-208ENST00000548522 NDUFB10O96000 172 aa19.75■□□□□ 0.75
SSH1-208ENST00000548522 AKR1A1P14550 325 aa19.75■□□□□ 0.75
SSH1-208ENST00000548522 SMAD3P84022 425 aaKnown RBP19.75■□□□□ 0.75
SSH1-208ENST00000548522 TSHZ3Q63HK5 1081 aa19.75■□□□□ 0.75
SSH1-208ENST00000548522 SNRNP48Q6IEG0 339 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms