RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 TCEAL9Q9UHQ7 104 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 USP17L3A6NCW0 530 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 USP17L4A6NCW7 530 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 PLA2G6O60733 806 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 IBSPP21815 317 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-206ENST00000548283 CCDC96Q2M329 555 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 USP17L1Q7RTZ2 530 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 PHF20Q9BVI0 1012 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 MAF1Q9H063 256 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 DEFB129Q9H1M3 183 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 GINM1Q9NU53 330 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 PUF60Q9UHX1 559 aaKnown RBP8.33□□□□□ -1.08
TMEM116-206ENST00000548283 SMC3Q9UQE7 1217 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 CDKL5O76039 1030 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 S100BP04271 92 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-206ENST00000548283 RPS12P25398 132 aaKnown RBP8.33□□□□□ -1.08
TMEM116-206ENST00000548283 GHRHRQ02643 423 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 CDC37L1Q7L3B6 337 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 CCDC24Q8N4L8 307 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 SDR42E1Q8WUS8 393 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 DHX36Q9H2U1 1008 aaKnown RBP8.33□□□□□ -1.08
TMEM116-206ENST00000548283 RAI14Q9P0K7 980 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 FAM198AQ9UFP1 575 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 MAD2L2Q9UI95 211 aa8.33□□□□□ -1.08
TMEM116-206ENST00000548283 LCTP09848 1927 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 B4E1Z4 1266 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 hCG_1984214I3L0E3 225 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 IRX3P78415 501 aaPredicted RBP8.32□□□□□ -1.08
TMEM116-206ENST00000548283 MFSD14BQ5SR56 506 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 C10orf62Q5T681 223 aaPredicted RBP8.32□□□□□ -1.08
TMEM116-206ENST00000548283 CDC42EP5Q6NZY7 148 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 DNAJC14Q6Y2X3 702 aaPredicted RBP8.32□□□□□ -1.08
TMEM116-206ENST00000548283 TMTC3Q6ZXV5 915 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 ZNF713Q8N859 430 aaPredicted RBP8.32□□□□□ -1.08
TMEM116-206ENST00000548283 C1orf131Q8NDD1 294 aaKnown RBP8.32□□□□□ -1.08
TMEM116-206ENST00000548283 LZTS2Q9BRK4 669 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 LARP6Q9BRS8 491 aaKnown RBP8.32□□□□□ -1.08
TMEM116-206ENST00000548283 SPZ1Q9BXG8 430 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 FOXP1Q9H334 677 aaPredicted RBP8.32□□□□□ -1.08
TMEM116-206ENST00000548283 GYS2P54840 703 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 SLC35G1Q2M3R5 365 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 SDE2Q6IQ49 451 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 RSBN1LQ6PCB5 846 aaPredicted RBP8.32□□□□□ -1.08
TMEM116-206ENST00000548283 SH3BP5LQ7L8J4 393 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 FAM83AQ86UY5 434 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 ADAMTS19Q8TE59 1207 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 PIBF1Q8WXW3 757 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 DNAJC18Q9H819 358 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 DDX4Q9NQI0 724 aaKnown RBP8.32□□□□□ -1.08
TMEM116-206ENST00000548283 AATFQ9NY61 560 aaKnown RBP eCLIP8.32□□□□□ -1.08
TMEM116-206ENST00000548283 PRKAG2Q9UGJ0 569 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 TNKSO95271 1327 aa8.32□□□□□ -1.08
TMEM116-206ENST00000548283 A0A1W2PQ27 194 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 A0A1W2PQ64 194 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 A0A1W2PQD8 194 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 SYCE3A1L190 88 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 GADD45BO75293 160 aaPredicted RBP8.31□□□□□ -1.08
TMEM116-206ENST00000548283 MBD3O95983 291 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 SHMT1P34896 483 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 PRELPP51888 382 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 PTPAQ15257 358 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 MCTP1Q6DN14 999 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 JAZF1Q86VZ6 243 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 VPS37DQ86XT2 251 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 FANCBQ8NB91 859 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 ZNF830Q96NB3 372 aaPredicted RBP8.31□□□□□ -1.08
TMEM116-206ENST00000548283 GPHNQ9NQX3 736 aaPredicted RBP8.31□□□□□ -1.08
TMEM116-206ENST00000548283 LOXHD1Q8IVV2 1947 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 USP17L12C9JPN9 530 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 USP17L21D6R901 530 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 JAK2O60674 1132 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 DPEP1P16444 411 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 UBE2HP62256 183 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 KIF23Q02241 960 aaPredicted RBP8.31□□□□□ -1.08
TMEM116-206ENST00000548283 CSPP1Q1MSJ5 1256 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 NECAB1Q8N987 351 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 MIGA1Q8NAN2 632 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 GMCL1P1Q8NEA9 526 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 ENGASEQ8NFI3 743 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 NOL10Q9BSC4 688 aaKnown RBP8.31□□□□□ -1.08
TMEM116-206ENST00000548283 RIOX1Q9H6W3 641 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 SSC5DA1L4H1 1573 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 KLF18A0A0U1RQI7 1052 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 ESYT2A0FGR8 921 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 SMIM22K7EJ46 135 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 SCP2P22307 547 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 PLCD1P51178 756 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 EVX2Q03828 476 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 ORC2Q13416 577 aaPredicted RBP8.31□□□□□ -1.08
TMEM116-206ENST00000548283 SPDYE2Q495Y8 402 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 DZIP1Q86YF9 867 aaKnown RBP8.31□□□□□ -1.08
TMEM116-206ENST00000548283 ZNF654Q8IZM8 581 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 NRBP1Q9UHY1 535 aa8.31□□□□□ -1.08
TMEM116-206ENST00000548283 CCDC196A0A1B0GTZ2 297 aa8.3□□□□□ -1.08
TMEM116-206ENST00000548283 NFKBIEO00221 500 aa8.3□□□□□ -1.08
TMEM116-206ENST00000548283 PPP6R2O75170 966 aa8.3□□□□□ -1.08
TMEM116-206ENST00000548283 YEATS4O95619 227 aa8.3□□□□□ -1.08
TMEM116-206ENST00000548283 MMP1P03956 469 aa8.3□□□□□ -1.08
TMEM116-206ENST00000548283 SLC3A2P08195 630 aaKnown RBP8.3□□□□□ -1.08
TMEM116-206ENST00000548283 SLFN14P0C7P3 912 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms