RNA–Protein interactions for RNA: ENST00000548173.5

PRIM1-203, Transcript of DNA primase subunit 1, humanhuman

TSL 4

Gene PRIM1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-203ENST00000548173 TACC3Q9Y6A5 838 aa9.41□□□□□ -0.9
PRIM1-203ENST00000548173 ZMYM6O95789 1325 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 F5H6K3 240 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 TTLL1O95922 423 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 HMGCRP04035 888 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 GJB1P08034 283 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 TSPY3P0CV98 308 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 TSPY8P0CW00 308 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 XRCC5P13010 732 aaKnown RBP9.4□□□□□ -0.9
PRIM1-203ENST00000548173 CYP2B6P20813 491 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 TFAP4Q01664 338 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 KLRC3Q07444 240 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 FAM47AQ5JRC9 791 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 FAM83BQ5T0W9 1011 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 TTC22Q5TAA0 569 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 SHISA4Q96DD7 197 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 MOV10L1Q9BXT6 1211 aaKnown RBP9.4□□□□□ -0.9
PRIM1-203ENST00000548173 SPATC1LQ9H0A9 340 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 RNF208Q9H0X6 261 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 UNC93B1Q9H1C4 597 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 DIAPH3Q9NSV4 1193 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 FBXO28Q9NVF7 368 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 CLIP2Q9UDT6 1046 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 SYNPO2Q9UMS6 1093 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 ADAMTS5Q9UNA0 930 aa9.4□□□□□ -0.9
PRIM1-203ENST00000548173 A0A0G2JMZ2 1700 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 SLC15A5A6NIM6 579 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 HIP1O00291 1037 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 ORC4O43929 436 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 RAD21O60216 631 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 NDUFB10O96000 172 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 GSPT1P15170 499 aaKnown RBP9.39□□□□□ -0.91
PRIM1-203ENST00000548173 PTPREP23469 700 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 RGS2P41220 211 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 GJA8P48165 433 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 MFAP1P55081 439 aaKnown RBP9.39□□□□□ -0.91
PRIM1-203ENST00000548173 CWC27Q6UX04 472 aaKnown RBP9.39□□□□□ -0.91
PRIM1-203ENST00000548173 SHCBP1Q8NEM2 672 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 NKX2-3Q8TAU0 364 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 TRIB2Q92519 343 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 NUP88Q99567 741 aaPredicted RBP9.39□□□□□ -0.91
PRIM1-203ENST00000548173 IL17RBQ9NRM6 502 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 PPP1R9AQ9ULJ8 1098 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 PARP14Q460N5 1801 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 MYH4Q9Y623 1939 aa9.39□□□□□ -0.91
PRIM1-203ENST00000548173 TSPY2A6NKD2 308 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 VWA5AO00534 786 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 SGPL1O95470 568 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 HOXC6P09630 235 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 CD44P16070 742 aaKnown RBP9.38□□□□□ -0.91
PRIM1-203ENST00000548173 ERCC3P19447 782 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 NOVP48745 357 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 TRIM32Q13049 653 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 MAP2K5Q13163 448 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 GRB14Q14449 540 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 PLS1Q14651 629 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 TMEM132BQ14DG7 1078 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 MAP3K21Q5TCX8 1036 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 WDR78Q5VTH9 848 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 TRMT44Q8IYL2 757 aaKnown RBP9.38□□□□□ -0.91
PRIM1-203ENST00000548173 LRRC47Q8N1G4 583 aaKnown RBP9.38□□□□□ -0.91
PRIM1-203ENST00000548173 GMCL1P1Q8NEA9 526 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 REPS2Q8NFH8 660 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 U2AF1L4Q8WU68 220 aaKnown RBP9.38□□□□□ -0.91
PRIM1-203ENST00000548173 APBA2Q99767 749 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 NBPF3Q9H094 633 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 CWC22Q9HCG8 908 aaKnown RBP9.38□□□□□ -0.91
PRIM1-203ENST00000548173 PAK6Q9NQU5 681 aaPredicted RBP9.38□□□□□ -0.91
PRIM1-203ENST00000548173 FARP1Q9Y4F1 1045 aaPredicted RBP9.38□□□□□ -0.91
PRIM1-203ENST00000548173 IVNS1ABPQ9Y6Y0 642 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 PDE4DIPQ5VU43 2346 aa9.38□□□□□ -0.91
PRIM1-203ENST00000548173 RPTORQ8N122 1335 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 STRNO43815 780 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 RANBP6O60518 1105 aaKnown RBP9.37□□□□□ -0.91
PRIM1-203ENST00000548173 NMT2O60551 498 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 PCP11498 1178 aaKnown RBP9.37□□□□□ -0.91
PRIM1-203ENST00000548173 ZKSCAN1P17029 563 aaPredicted RBP9.37□□□□□ -0.91
PRIM1-203ENST00000548173 HAND2P61296 217 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 CCL14Q16627 93 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 PPP4R3BQ5MIZ7 849 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 SLFN13Q68D06 897 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 RIOX2Q8IUF8 465 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 PRPF38AQ8NAV1 312 aaKnown RBP9.37□□□□□ -0.91
PRIM1-203ENST00000548173 STAG1Q8WVM7 1258 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 DEFB118Q96PH6 123 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 SLF1Q9BQI6 1058 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 DSCC1Q9BVC3 393 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.37□□□□□ -0.91
PRIM1-203ENST00000548173 IL25Q9H293 177 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 MROH8Q9H579 483 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 ZNF214Q9UL59 606 aaPredicted RBP9.37□□□□□ -0.91
PRIM1-203ENST00000548173 STX8Q9UNK0 236 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 BRCA2P51587 3418 aa9.37□□□□□ -0.91
PRIM1-203ENST00000548173 COL11A1P12107 1806 aaPredicted RBP9.36□□□□□ -0.91
PRIM1-203ENST00000548173 SLC25A27O95847 323 aa9.36□□□□□ -0.91
PRIM1-203ENST00000548173 IGHA2P01877 340 aa9.36□□□□□ -0.91
PRIM1-203ENST00000548173 CAPN2P17655 700 aa9.36□□□□□ -0.91
PRIM1-203ENST00000548173 ADORA2AP29274 412 aa9.36□□□□□ -0.91
PRIM1-203ENST00000548173 STAT3P40763 770 aa9.36□□□□□ -0.91
PRIM1-203ENST00000548173 CACNB2Q08289 660 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms