RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 ZNF384Q8TF68 577 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 KCNB2Q92953 911 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 TTC14Q96N46 770 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 P2RX7Q99572 595 aaKnown RBP11.46□□□□□ -0.57
CDK4-205ENST00000547853 WDR18Q9BV38 432 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.46□□□□□ -0.57
CDK4-205ENST00000547853 RBPJLQ9UBG7 517 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 MYH1P12882 1939 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 PDS5AQ29RF7 1337 aaKnown RBP11.45□□□□□ -0.58
CDK4-205ENST00000547853 GOLGA6L6A8MZA4 724 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 MSCO60682 206 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 IGHA2P01877 340 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 CYBAP13498 195 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 DNAJB2P25686 324 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 EPHB4P54760 987 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 BACE1P56817 501 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 VPS53Q5VIR6 699 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 SH3RF1Q7Z6J0 888 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 TRPV1Q8NER1 839 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 PI4K2BQ8TCG2 481 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 FAM163AQ96GL9 167 aaPredicted RBP11.45□□□□□ -0.58
CDK4-205ENST00000547853 RNPC3Q96LT9 517 aaKnown RBP11.45□□□□□ -0.58
CDK4-205ENST00000547853 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.45□□□□□ -0.58
CDK4-205ENST00000547853 THEGQ9P2T0 379 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 DENND2AQ9ULE3 1009 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 PALD1Q9ULE6 856 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 SMC3Q9UQE7 1217 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 LRRC37A2A6NM11 1700 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 SMCHD1A6NHR9 2005 aa11.45□□□□□ -0.58
CDK4-205ENST00000547853 TRIM43BA6NCK2 446 aa11.44□□□□□ -0.58
CDK4-205ENST00000547853 STX6O43752 255 aa11.44□□□□□ -0.58
CDK4-205ENST00000547853 SURF6O75683 361 aaKnown RBP11.44□□□□□ -0.58
CDK4-205ENST00000547853 PDCP20941 246 aa11.44□□□□□ -0.58
CDK4-205ENST00000547853 ITGB8P26012 769 aa11.44□□□□□ -0.58
CDK4-205ENST00000547853 JAG1P78504 1218 aa11.44□□□□□ -0.58
CDK4-205ENST00000547853 RASGRF1Q13972 1273 aa11.44□□□□□ -0.58
CDK4-205ENST00000547853 ANKRD1Q15327 319 aa11.44□□□□□ -0.58
CDK4-205ENST00000547853 ATP2B3Q16720 1220 aa11.44□□□□□ -0.58
CDK4-205ENST00000547853 SHROOM1Q2M3G4 852 aaPredicted RBP11.44□□□□□ -0.58
CDK4-205ENST00000547853 Q3C1V9 767 aa11.44□□□□□ -0.58
CDK4-205ENST00000547853 ATXN2LQ8WWM7 1075 aaKnown RBP11.44□□□□□ -0.58
CDK4-205ENST00000547853 TRIM43Q96BQ3 446 aaPredicted RBP11.44□□□□□ -0.58
CDK4-205ENST00000547853 ASB2Q96Q27 587 aa11.44□□□□□ -0.58
CDK4-205ENST00000547853 UHRF1Q96T88 793 aaPredicted RBP11.44□□□□□ -0.58
CDK4-205ENST00000547853 PAGR1Q9BTK6 254 aa11.44□□□□□ -0.58
CDK4-205ENST00000547853 LSG1Q9H089 658 aaKnown RBP11.44□□□□□ -0.58
CDK4-205ENST00000547853 AS3MTQ9HBK9 375 aa11.44□□□□□ -0.58
CDK4-205ENST00000547853 USP25Q9UHP3 1055 aa11.44□□□□□ -0.58
CDK4-205ENST00000547853 R3HCC1Q9Y3T6 440 aaKnown RBP11.44□□□□□ -0.58
CDK4-205ENST00000547853 SNX14Q9Y5W7 946 aa11.44□□□□□ -0.58
CDK4-205ENST00000547853 ZNFX1Q9P2E3 1918 aaKnown RBP11.43□□□□□ -0.58
CDK4-205ENST00000547853 UQCRHLA0A096LP55 91 aa11.43□□□□□ -0.58
CDK4-205ENST00000547853 GPR75-ASB3A0A0A6YYF3 556 aa11.43□□□□□ -0.58
CDK4-205ENST00000547853 CNMDO75829 334 aa11.43□□□□□ -0.58
CDK4-205ENST00000547853 F13A1P00488 732 aa11.43□□□□□ -0.58
CDK4-205ENST00000547853 UQCRHP07919 91 aa11.43□□□□□ -0.58
CDK4-205ENST00000547853 HOXC6P09630 235 aa11.43□□□□□ -0.58
CDK4-205ENST00000547853 PSMA5P28066 241 aa11.43□□□□□ -0.58
CDK4-205ENST00000547853 GRB14Q14449 540 aa11.43□□□□□ -0.58
CDK4-205ENST00000547853 GJC2Q5T442 439 aaPredicted RBP11.43□□□□□ -0.58
CDK4-205ENST00000547853 MFSD14CQ5VZR4 134 aa11.43□□□□□ -0.58
CDK4-205ENST00000547853 SLC39A5Q6ZMH5 540 aa11.43□□□□□ -0.58
CDK4-205ENST00000547853 CLASRPQ8N2M8 674 aaKnown RBP11.43□□□□□ -0.58
CDK4-205ENST00000547853 GTF3C2Q8WUA4 911 aaPredicted RBP11.43□□□□□ -0.58
CDK4-205ENST00000547853 PIBF1Q8WXW3 757 aa11.43□□□□□ -0.58
CDK4-205ENST00000547853 ALDH8A1Q9H2A2 487 aaPredicted RBP11.43□□□□□ -0.58
CDK4-205ENST00000547853 DNAJC18Q9H819 358 aa11.43□□□□□ -0.58
CDK4-205ENST00000547853 DIAPH3Q9NSV4 1193 aa11.43□□□□□ -0.58
CDK4-205ENST00000547853 GNL3LQ9NVN8 582 aaKnown RBP11.43□□□□□ -0.58
CDK4-205ENST00000547853 TMOD4Q9NZQ9 345 aa11.43□□□□□ -0.58
CDK4-205ENST00000547853 COL11A1P12107 1806 aaPredicted RBP11.42□□□□□ -0.58
CDK4-205ENST00000547853 ELP1O95163 1332 aa11.42□□□□□ -0.58
CDK4-205ENST00000547853 SRGAP3O43295 1099 aa11.42□□□□□ -0.58
CDK4-205ENST00000547853 ADORA1P30542 326 aa11.42□□□□□ -0.58
CDK4-205ENST00000547853 CYP2C19P33261 490 aa11.42□□□□□ -0.58
CDK4-205ENST00000547853 C1orf53Q5VUE5 145 aa11.42□□□□□ -0.58
CDK4-205ENST00000547853 TICAM2Q86XR7 235 aa11.42□□□□□ -0.58
CDK4-205ENST00000547853 EVI5LQ96CN4 794 aa11.42□□□□□ -0.58
CDK4-205ENST00000547853 ZNF576Q9H609 170 aa11.42□□□□□ -0.58
CDK4-205ENST00000547853 SNRKQ9NRH2 765 aa11.42□□□□□ -0.58
CDK4-205ENST00000547853 HERC5Q9UII4 1024 aaKnown RBP11.42□□□□□ -0.58
CDK4-205ENST00000547853 CYP46A1Q9Y6A2 500 aa11.42□□□□□ -0.58
CDK4-205ENST00000547853 KBTBD13C9JR72 458 aa11.41□□□□□ -0.58
CDK4-205ENST00000547853 CAVIN2O95810 425 aa11.41□□□□□ -0.58
CDK4-205ENST00000547853 ASNSP08243 561 aa11.41□□□□□ -0.58
CDK4-205ENST00000547853 CNGA1P29973 690 aa11.41□□□□□ -0.58
CDK4-205ENST00000547853 GTF2F1P35269 517 aaKnown RBP eCLIP11.41□□□□□ -0.58
CDK4-205ENST00000547853 AK2P54819 239 aa11.41□□□□□ -0.58
CDK4-205ENST00000547853 MECOMQ03112 1051 aa11.41□□□□□ -0.58
CDK4-205ENST00000547853 AKNAD1Q5T1N1 836 aa11.41□□□□□ -0.58
CDK4-205ENST00000547853 RNF20Q5VTR2 975 aa11.41□□□□□ -0.58
CDK4-205ENST00000547853 CCDC102BQ68D86 513 aa11.41□□□□□ -0.58
CDK4-205ENST00000547853 CCAR1Q8IX12 1150 aaKnown RBP11.41□□□□□ -0.58
CDK4-205ENST00000547853 SLF2Q8IX21 1173 aa11.41□□□□□ -0.58
CDK4-205ENST00000547853 MYRIPQ8NFW9 859 aa11.41□□□□□ -0.58
CDK4-205ENST00000547853 NPLOC4Q8TAT6 608 aa11.41□□□□□ -0.58
CDK4-205ENST00000547853 TIFAQ96CG3 184 aa11.41□□□□□ -0.58
CDK4-205ENST00000547853 EDC3Q96F86 508 aaKnown RBP11.41□□□□□ -0.58
CDK4-205ENST00000547853 UPF3BQ9BZI7 483 aaKnown RBP11.41□□□□□ -0.58
CDK4-205ENST00000547853 ZSWIM6Q9HCJ5 1215 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms