RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 ZSWIM6Q9HCJ5 1215 aa24.46■■□□□ 1.51
GPN3-205ENST00000547323 PARP14Q460N5 1801 aa24.45■■□□□ 1.5
GPN3-205ENST00000547323 ADGRA2Q96PE1 1338 aa24.45■■□□□ 1.5
GPN3-205ENST00000547323 PEX10O60683 326 aa24.45■■□□□ 1.5
GPN3-205ENST00000547323 HMGB1P09429 215 aaKnown RBP24.45■■□□□ 1.5
GPN3-205ENST00000547323 BMP3P12645 472 aa24.45■■□□□ 1.5
GPN3-205ENST00000547323 RPS6KB1P23443 525 aa24.45■■□□□ 1.5
GPN3-205ENST00000547323 PSMA5P28066 241 aa24.45■■□□□ 1.5
GPN3-205ENST00000547323 SAMD1Q6SPF0 538 aaPredicted RBP24.45■■□□□ 1.5
GPN3-205ENST00000547323 KCTD1Q719H9 257 aa24.45■■□□□ 1.5
GPN3-205ENST00000547323 GMCL1Q96IK5 515 aa24.45■■□□□ 1.5
GPN3-205ENST00000547323 TMEM87BQ96K49 555 aa24.45■■□□□ 1.5
GPN3-205ENST00000547323 PARK7Q99497 189 aaKnown RBP24.45■■□□□ 1.5
GPN3-205ENST00000547323 CFHR5Q9BXR6 569 aa24.45■■□□□ 1.5
GPN3-205ENST00000547323 CPA4Q9UI42 421 aa24.45■■□□□ 1.5
GPN3-205ENST00000547323 SLC1A4P43007 532 aa24.44■■□□□ 1.5
GPN3-205ENST00000547323 ANAPC15P60006 121 aa24.44■■□□□ 1.5
GPN3-205ENST00000547323 MTA3Q9BTC8 594 aa24.44■■□□□ 1.5
GPN3-205ENST00000547323 UPF3BQ9BZI7 483 aaKnown RBP24.44■■□□□ 1.5
GPN3-205ENST00000547323 PNMA3Q9UL41 463 aa24.44■■□□□ 1.5
GPN3-205ENST00000547323 ISY1Q9ULR0 285 aaKnown RBP24.44■■□□□ 1.5
GPN3-205ENST00000547323 FRMPD2Q68DX3 1309 aaPredicted RBP24.43■■□□□ 1.5
GPN3-205ENST00000547323 WDR19Q8NEZ3 1342 aa24.43■■□□□ 1.5
GPN3-205ENST00000547323 TLR2O60603 784 aa24.43■■□□□ 1.5
GPN3-205ENST00000547323 FLOT1O75955 427 aa24.43■■□□□ 1.5
GPN3-205ENST00000547323 PDHBP11177 359 aa24.43■■□□□ 1.5
GPN3-205ENST00000547323 HERVK_113P62684 666 aa24.43■■□□□ 1.5
GPN3-205ENST00000547323 COG2Q14746 738 aa24.43■■□□□ 1.5
GPN3-205ENST00000547323 TTBK2Q6IQ55 1244 aa24.43■■□□□ 1.5
GPN3-205ENST00000547323 RUFY3Q7L099 469 aa24.43■■□□□ 1.5
GPN3-205ENST00000547323 SMCR8Q8TEV9 937 aaPredicted RBP24.43■■□□□ 1.5
GPN3-205ENST00000547323 DCAF4Q8WV16 495 aa24.43■■□□□ 1.5
GPN3-205ENST00000547323 C22orf23Q9BZE7 217 aa24.43■■□□□ 1.5
GPN3-205ENST00000547323 TM6SF1Q9BZW5 370 aa24.43■■□□□ 1.5
GPN3-205ENST00000547323 TMEM232C9JQI7 657 aa24.42■■□□□ 1.5
GPN3-205ENST00000547323 CCDC96Q2M329 555 aa24.42■■□□□ 1.5
GPN3-205ENST00000547323 C17orf99Q6UX52 265 aa24.42■■□□□ 1.5
GPN3-205ENST00000547323 Q6ZUG5 572 aa24.42■■□□□ 1.5
GPN3-205ENST00000547323 IL17RAQ96F46 866 aa24.42■■□□□ 1.5
GPN3-205ENST00000547323 GPCPD1Q9NPB8 672 aa24.42■■□□□ 1.5
GPN3-205ENST00000547323 CYP46A1Q9Y6A2 500 aa24.42■■□□□ 1.5
GPN3-205ENST00000547323 SPDYE16A6NNV3 312 aaPredicted RBP24.41■■□□□ 1.5
GPN3-205ENST00000547323 GOLGA8HP0CJ92 632 aa24.41■■□□□ 1.5
GPN3-205ENST00000547323 SNHG28P0DPA3 235 aa24.41■■□□□ 1.5
GPN3-205ENST00000547323 HSPA8P11142 646 aaKnown RBP24.41■■□□□ 1.5
GPN3-205ENST00000547323 DSG3P32926 999 aa24.41■■□□□ 1.5
GPN3-205ENST00000547323 LIFRP42702 1097 aa24.41■■□□□ 1.5
GPN3-205ENST00000547323 NFXL1Q6ZNB6 911 aa24.41■■□□□ 1.5
GPN3-205ENST00000547323 ATG4CQ96DT6 458 aa24.41■■□□□ 1.5
GPN3-205ENST00000547323 MYL10Q9BUA6 226 aa24.41■■□□□ 1.5
GPN3-205ENST00000547323 HOXC10Q9NYD6 342 aa24.41■■□□□ 1.5
GPN3-205ENST00000547323 RBPJLQ9UBG7 517 aa24.41■■□□□ 1.5
GPN3-205ENST00000547323 GPR25O00155 361 aa24.4■■□□□ 1.5
GPN3-205ENST00000547323 ZNF543Q08ER8 600 aa24.4■■□□□ 1.5
GPN3-205ENST00000547323 RAB11FIP4Q86YS3 637 aa24.4■■□□□ 1.5
GPN3-205ENST00000547323 ZNF654Q8IZM8 581 aa24.4■■□□□ 1.5
GPN3-205ENST00000547323 ANKRD13CQ8N6S4 541 aa24.4■■□□□ 1.5
GPN3-205ENST00000547323 TXNRD2Q9NNW7 524 aa24.4■■□□□ 1.5
GPN3-205ENST00000547323 BRPF3Q9ULD4 1205 aa24.4■■□□□ 1.5
GPN3-205ENST00000547323 CCDC69A6NI79 296 aa24.39■■□□□ 1.49
GPN3-205ENST00000547323 BCRP11274 1271 aa24.39■■□□□ 1.49
GPN3-205ENST00000547323 SLC16A2P36021 539 aa24.39■■□□□ 1.49
GPN3-205ENST00000547323 TROAPQ12815 778 aa24.39■■□□□ 1.49
GPN3-205ENST00000547323 TMTC2Q8N394 836 aa24.39■■□□□ 1.49
GPN3-205ENST00000547323 KIF2CQ99661 725 aa24.39■■□□□ 1.49
GPN3-205ENST00000547323 SLF1Q9BQI6 1058 aa24.39■■□□□ 1.49
GPN3-205ENST00000547323 PAGR1Q9BTK6 254 aa24.39■■□□□ 1.49
GPN3-205ENST00000547323 CPVLQ9H3G5 476 aa24.39■■□□□ 1.49
GPN3-205ENST00000547323 FEM1BQ9UK73 627 aa24.39■■□□□ 1.49
GPN3-205ENST00000547323 PPP1R9AQ9ULJ8 1098 aa24.39■■□□□ 1.49
GPN3-205ENST00000547323 CASP8AP2Q9UKL3 1982 aa24.39■■□□□ 1.49
GPN3-205ENST00000547323 COL11A1P12107 1806 aaPredicted RBP24.39■■□□□ 1.49
GPN3-205ENST00000547323 CNMDO75829 334 aa24.38■■□□□ 1.49
GPN3-205ENST00000547323 GCLCP48506 637 aaPredicted RBP24.38■■□□□ 1.49
GPN3-205ENST00000547323 RBM25P49756 843 aaKnown RBP24.38■■□□□ 1.49
GPN3-205ENST00000547323 LBX1P52954 281 aa24.38■■□□□ 1.49
GPN3-205ENST00000547323 FGD1P98174 961 aa24.38■■□□□ 1.49
GPN3-205ENST00000547323 CATIPQ7Z7H3 387 aa24.38■■□□□ 1.49
GPN3-205ENST00000547323 SGMS1Q86VZ5 419 aa24.38■■□□□ 1.49
GPN3-205ENST00000547323 STAG2Q8N3U4 1231 aa24.38■■□□□ 1.49
GPN3-205ENST00000547323 KIFC2Q96AC6 838 aa24.38■■□□□ 1.49
GPN3-205ENST00000547323 BTBD7Q9P203 1132 aa24.38■■□□□ 1.49
GPN3-205ENST00000547323 ADAMTS5Q9UNA0 930 aa24.38■■□□□ 1.49
GPN3-205ENST00000547323 ECM2O94769 699 aaPredicted RBP24.37■■□□□ 1.49
GPN3-205ENST00000547323 PARP1P09874 1014 aaKnown RBP24.37■■□□□ 1.49
GPN3-205ENST00000547323 RXRAP19793 462 aa24.37■■□□□ 1.49
GPN3-205ENST00000547323 CTCFP49711 727 aaPredicted RBP24.37■■□□□ 1.49
GPN3-205ENST00000547323 APOBRQ0VD83 1088 aa24.37■■□□□ 1.49
GPN3-205ENST00000547323 IKQ13123 557 aaPredicted RBP24.37■■□□□ 1.49
GPN3-205ENST00000547323 Q3C1V9 767 aa24.37■■□□□ 1.49
GPN3-205ENST00000547323 LBX2Q6XYB7 198 aa24.37■■□□□ 1.49
GPN3-205ENST00000547323 PRPF38AQ8NAV1 312 aaKnown RBP24.37■■□□□ 1.49
GPN3-205ENST00000547323 CHURC1Q8WUH1 139 aa24.37■■□□□ 1.49
GPN3-205ENST00000547323 NUP133Q8WUM0 1156 aa24.37■■□□□ 1.49
GPN3-205ENST00000547323 BRF1Q92994 677 aa24.37■■□□□ 1.49
GPN3-205ENST00000547323 LARP6Q9BRS8 491 aaKnown RBP24.37■■□□□ 1.49
GPN3-205ENST00000547323 UPF2Q9HAU5 1272 aaKnown RBP24.37■■□□□ 1.49
GPN3-205ENST00000547323 PDRG1Q9NUG6 133 aa24.37■■□□□ 1.49
GPN3-205ENST00000547323 PLA2G6O60733 806 aa24.36■■□□□ 1.49
GPN3-205ENST00000547323 STAT2P52630 851 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms