RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 STAG1Q8WVM7 1258 aa13.71□□□□□ -0.21
ATXN2-216ENST00000546483 CAPS2Q9BXY5 557 aa13.71□□□□□ -0.21
ATXN2-216ENST00000546483 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.71□□□□□ -0.21
ATXN2-216ENST00000546483 TOMM22Q9NS69 142 aa13.71□□□□□ -0.21
ATXN2-216ENST00000546483 PCDHB6Q9Y5E3 794 aa13.71□□□□□ -0.21
ATXN2-216ENST00000546483 SHTN1A0MZ66 631 aa13.71□□□□□ -0.21
ATXN2-216ENST00000546483 GOLGA6BA6NDN3 693 aa13.71□□□□□ -0.21
ATXN2-216ENST00000546483 RNF225M0QZC1 329 aaPredicted RBP13.71□□□□□ -0.21
ATXN2-216ENST00000546483 KIF1CO43896 1103 aaKnown RBP13.71□□□□□ -0.21
ATXN2-216ENST00000546483 BMP15O95972 392 aa13.71□□□□□ -0.21
ATXN2-216ENST00000546483 KRT9P35527 623 aa13.71□□□□□ -0.21
ATXN2-216ENST00000546483 ADD2P35612 726 aa13.71□□□□□ -0.21
ATXN2-216ENST00000546483 CCT5P48643 541 aa13.71□□□□□ -0.21
ATXN2-216ENST00000546483 SART3Q15020 963 aaKnown RBP13.71□□□□□ -0.21
ATXN2-216ENST00000546483 MMGT1Q8N4V1 131 aa13.71□□□□□ -0.21
ATXN2-216ENST00000546483 SLF1Q9BQI6 1058 aa13.71□□□□□ -0.21
ATXN2-216ENST00000546483 PLEKHA4Q9H4M7 779 aa13.71□□□□□ -0.21
ATXN2-216ENST00000546483 CXorf56Q9H5V9 222 aa13.71□□□□□ -0.21
ATXN2-216ENST00000546483 N4BP3O15049 544 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 FSBPO95073 299 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 KRT83P78385 493 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 UBE3CQ15386 1083 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 MEA1Q16626 185 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 B4GALNT4Q76KP1 1039 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 HOMEZQ8IX15 550 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 SEPT12Q8IYM1 358 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 MARCH10Q8NA82 808 aaPredicted RBP13.7□□□□□ -0.22
ATXN2-216ENST00000546483 OR8K1Q8NGG5 319 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 NKX2-3Q8TAU0 364 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 FERMT2Q96AC1 680 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 PURBQ96QR8 312 aaKnown RBP13.7□□□□□ -0.22
ATXN2-216ENST00000546483 SLC26A6Q9BXS9 759 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 SENP2Q9HC62 589 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 TOGARAM1Q9Y4F4 1720 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 OPA1O60313 960 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 DEXIO95424 95 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 ATP1A1P05023 1023 aaKnown RBP13.7□□□□□ -0.22
ATXN2-216ENST00000546483 TNFRSF8P28908 595 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 FNTAP49354 379 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 USP49Q70CQ1 688 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 ANKRD20A12PQ8NF67 263 aa13.7□□□□□ -0.22
ATXN2-216ENST00000546483 RIN2Q8WYP3 895 aaPredicted RBP13.7□□□□□ -0.22
ATXN2-216ENST00000546483 NUP88Q99567 741 aaPredicted RBP13.7□□□□□ -0.22
ATXN2-216ENST00000546483 PYM1Q9BRP8 204 aaKnown RBP13.7□□□□□ -0.22
ATXN2-216ENST00000546483 MYH8P13535 1937 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 A0A087X0B3 334 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 SRRM3A6NNA2 597 aaPredicted RBP13.69□□□□□ -0.22
ATXN2-216ENST00000546483 CCDC172P0C7W6 258 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 PRLRP16471 622 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 RXRAP19793 462 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 INPP5BP32019 993 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 ATP6V1AP38606 617 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 ZAP70P43403 619 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 LIG3P49916 1009 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 HERVK_113P62684 666 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 TCP11X2Q5H9J9 407 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 ALS2CLQ60I27 953 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 TRIM22Q8IYM9 498 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 BCAS4Q8TDM0 211 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 DONSONQ9NYP3 566 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 GGA2Q9UJY4 613 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 DENND2AQ9ULE3 1009 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 SLC12A7Q9Y666 1083 aa13.69□□□□□ -0.22
ATXN2-216ENST00000546483 KRT86O43790 486 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 MYBL2P10244 700 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 MAP2K2P36507 400 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 STX17P56962 302 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 SCARF1Q14162 830 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 TTF1Q15361 905 aaPredicted RBP13.68□□□□□ -0.22
ATXN2-216ENST00000546483 E2F4Q16254 413 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 TMEM67Q5HYA8 995 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 JAKMIP2Q96AA8 810 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 CHP1Q99653 195 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 CAPN11Q9UMQ6 739 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 GUCA1BQ9UMX6 200 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 AKAP11Q9UKA4 1901 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 B4E1Z4 1266 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 C21orf2O43822 256 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 KLHL10Q6JEL2 608 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 CCDC70Q6NSX1 233 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 EMBQ6PCB8 327 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 C1orf131Q8NDD1 294 aaKnown RBP13.68□□□□□ -0.22
ATXN2-216ENST00000546483 CNNM2Q9H8M5 875 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 TMOD3Q9NYL9 352 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 ITGB4P16144 1822 aa13.68□□□□□ -0.22
ATXN2-216ENST00000546483 DOT1LQ8TEK3 1739 aa13.67□□□□□ -0.22
ATXN2-216ENST00000546483 RXRBP28702 533 aa13.67□□□□□ -0.22
ATXN2-216ENST00000546483 ADORA1P30542 326 aa13.67□□□□□ -0.22
ATXN2-216ENST00000546483 GUCY1A2P33402 732 aa13.67□□□□□ -0.22
ATXN2-216ENST00000546483 SEMA3FQ13275 785 aa13.67□□□□□ -0.22
ATXN2-216ENST00000546483 NNTQ13423 1086 aa13.67□□□□□ -0.22
ATXN2-216ENST00000546483 WDR59Q6PJI9 974 aa13.67□□□□□ -0.22
ATXN2-216ENST00000546483 NFXL1Q6ZNB6 911 aa13.67□□□□□ -0.22
ATXN2-216ENST00000546483 CCDC170Q8IYT3 715 aa13.67□□□□□ -0.22
ATXN2-216ENST00000546483 TTC5Q8N0Z6 440 aa13.67□□□□□ -0.22
ATXN2-216ENST00000546483 CRACR2BQ8N4Y2 399 aaPredicted RBP13.67□□□□□ -0.22
ATXN2-216ENST00000546483 CAVIN3Q969G5 261 aa13.67□□□□□ -0.22
ATXN2-216ENST00000546483 CABS1Q96KC9 395 aa13.67□□□□□ -0.22
ATXN2-216ENST00000546483 PUS3Q9BZE2 481 aaKnown RBP13.67□□□□□ -0.22
ATXN2-216ENST00000546483 HDAC6Q9UBN7 1215 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms