RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 SOGA3Q5TF21 947 aa11.47□□□□□ -0.57
SOD2-216ENST00000546260 KLHDC4Q8TBB5 520 aa11.47□□□□□ -0.57
SOD2-216ENST00000546260 PHKBQ93100 1093 aa11.47□□□□□ -0.57
SOD2-216ENST00000546260 IFIH1Q9BYX4 1025 aaKnown RBP11.47□□□□□ -0.57
SOD2-216ENST00000546260 MMRN2Q9H8L6 949 aa11.47□□□□□ -0.57
SOD2-216ENST00000546260 TPD52L2O43399 206 aaKnown RBP11.47□□□□□ -0.57
SOD2-216ENST00000546260 TAF5LO75529 589 aa11.47□□□□□ -0.57
SOD2-216ENST00000546260 TRIM37O94972 964 aa11.47□□□□□ -0.57
SOD2-216ENST00000546260 KRT40Q6A162 431 aa11.47□□□□□ -0.57
SOD2-216ENST00000546260 TMEM154Q6P9G4 183 aa11.47□□□□□ -0.57
SOD2-216ENST00000546260 MFN1Q8IWA4 741 aa11.47□□□□□ -0.57
SOD2-216ENST00000546260 CDK5RAP3Q96JB5 506 aa11.47□□□□□ -0.57
SOD2-216ENST00000546260 ANAPC4Q9UJX5 808 aa11.47□□□□□ -0.57
SOD2-216ENST00000546260 ERICH2A1L162 156 aa11.47□□□□□ -0.57
SOD2-216ENST00000546260 SHOX2O60902 331 aaPredicted RBP11.47□□□□□ -0.57
SOD2-216ENST00000546260 DLGAP2Q9P1A6 1054 aa11.47□□□□□ -0.57
SOD2-216ENST00000546260 XBP1P17861 261 aa11.46□□□□□ -0.57
SOD2-216ENST00000546260 TCP1P17987 556 aaKnown RBP11.46□□□□□ -0.57
SOD2-216ENST00000546260 FNTAP49354 379 aa11.46□□□□□ -0.57
SOD2-216ENST00000546260 TTMPQ5BVD1 217 aa11.46□□□□□ -0.57
SOD2-216ENST00000546260 WLSQ5T9L3 541 aa11.46□□□□□ -0.57
SOD2-216ENST00000546260 TYW1BQ6NUM6 668 aa11.46□□□□□ -0.57
SOD2-216ENST00000546260 KSR1Q8IVT5 923 aa11.46□□□□□ -0.57
SOD2-216ENST00000546260 OR2W6PQ8NHA6 318 aa11.46□□□□□ -0.57
SOD2-216ENST00000546260 ARID5AQ03989 594 aa11.46□□□□□ -0.57
SOD2-216ENST00000546260 TMED1Q13445 227 aa11.46□□□□□ -0.57
SOD2-216ENST00000546260 COL9A3Q14050 684 aaPredicted RBP11.46□□□□□ -0.57
SOD2-216ENST00000546260 CCDC155Q8N6L0 562 aa11.46□□□□□ -0.57
SOD2-216ENST00000546260 WHAMMQ8TF30 809 aa11.46□□□□□ -0.57
SOD2-216ENST00000546260 BLZF1Q9H2G9 400 aa11.46□□□□□ -0.57
SOD2-216ENST00000546260 AATKQ6ZMQ8 1374 aa11.46□□□□□ -0.58
SOD2-216ENST00000546260 AHCYL1O43865 530 aa11.46□□□□□ -0.58
SOD2-216ENST00000546260 ABL1P00519 1130 aa11.46□□□□□ -0.58
SOD2-216ENST00000546260 MAGEA1P43355 309 aa11.46□□□□□ -0.58
SOD2-216ENST00000546260 SSRP1Q08945 709 aaKnown RBP11.46□□□□□ -0.58
SOD2-216ENST00000546260 KDM7AQ6ZMT4 941 aa11.46□□□□□ -0.58
SOD2-216ENST00000546260 SPATA21Q7Z572 469 aa11.46□□□□□ -0.58
SOD2-216ENST00000546260 DDX23Q9BUQ8 820 aaKnown RBP11.46□□□□□ -0.58
SOD2-216ENST00000546260 ITSN2Q9NZM3 1697 aa11.46□□□□□ -0.58
SOD2-216ENST00000546260 MOCS3O95396 460 aa11.46□□□□□ -0.58
SOD2-216ENST00000546260 EPS15P42566 896 aa11.46□□□□□ -0.58
SOD2-216ENST00000546260 RAB27AP51159 221 aa11.46□□□□□ -0.58
SOD2-216ENST00000546260 COPB1P53618 953 aaKnown RBP11.46□□□□□ -0.58
SOD2-216ENST00000546260 RAD23BP54727 409 aa11.46□□□□□ -0.58
SOD2-216ENST00000546260 MAGOHP61326 146 aaKnown RBP11.46□□□□□ -0.58
SOD2-216ENST00000546260 HDAC7Q8WUI4 952 aa11.46□□□□□ -0.58
SOD2-216ENST00000546260 ARHGEF2Q92974 986 aaKnown RBP11.46□□□□□ -0.58
SOD2-216ENST00000546260 MAGOHBQ96A72 148 aaKnown RBP11.46□□□□□ -0.58
SOD2-216ENST00000546260 EAF2Q96CJ1 260 aaPredicted RBP11.46□□□□□ -0.58
SOD2-216ENST00000546260 URB2Q14146 1524 aaKnown RBP11.45□□□□□ -0.58
SOD2-216ENST00000546260 KCNJ18B7U540 433 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 RASSF9O75901 435 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 ELF3P78545 371 aaPredicted RBP11.45□□□□□ -0.58
SOD2-216ENST00000546260 KCNJ12Q14500 433 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 NFRKBQ6P4R8 1299 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.45□□□□□ -0.58
SOD2-216ENST00000546260 TSEN2Q8NCE0 465 aaKnown RBP11.45□□□□□ -0.58
SOD2-216ENST00000546260 SPATA4Q8NEY3 305 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 FAM81AQ8TBF8 368 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 SMCR8Q8TEV9 937 aaPredicted RBP11.45□□□□□ -0.58
SOD2-216ENST00000546260 AIFM3Q96NN9 605 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 GPHNQ9NQX3 736 aaPredicted RBP11.45□□□□□ -0.58
SOD2-216ENST00000546260 LRWD1Q9UFC0 647 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 ZNF213O14771 459 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 CASP1P29466 404 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 DEUP1Q05D60 604 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 SETDB1Q15047 1291 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 C11orf91Q3C1V1 193 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 METTL16Q86W50 562 aaKnown RBP11.45□□□□□ -0.58
SOD2-216ENST00000546260 LBHD1Q9BQE6 289 aaPredicted RBP11.45□□□□□ -0.58
SOD2-216ENST00000546260 PPFIA2O75334 1257 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 HNRNPCP07910 306 aaKnown RBP eCLIP11.45□□□□□ -0.584e-7■■■■□ 20.8
SOD2-216ENST00000546260 ATP4AP20648 1035 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 ROR2Q01974 943 aaKnown RBP11.45□□□□□ -0.58
SOD2-216ENST00000546260 MAP3K12Q12852 859 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 TMEM139Q8IV31 216 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 SNRKQ9NRH2 765 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 INTS9Q9NV88 658 aaKnown RBP11.45□□□□□ -0.58
SOD2-216ENST00000546260 TLR7Q9NYK1 1049 aaKnown RBP11.45□□□□□ -0.58
SOD2-216ENST00000546260 EHD2Q9NZN4 543 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 SHANK2Q9UPX8 1470 aa11.45□□□□□ -0.58
SOD2-216ENST00000546260 YTHDF3Q7Z739 585 aaKnown RBP11.44□□□□□ -0.58
SOD2-216ENST00000546260 ECT2Q9H8V3 914 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 DNMBPQ6XZF7 1577 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 ADCY9O60503 1353 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 E7EWF7 191 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 CARSP49589 748 aaKnown RBP11.44□□□□□ -0.58
SOD2-216ENST00000546260 PPP2R2AP63151 447 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 PAK1Q13153 545 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 TRIM42Q8IWZ5 723 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 ANKRD42Q8N9B4 389 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 DPH5Q9H2P9 285 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 CHPF2Q9P2E5 772 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 MAP3K2Q9Y2U5 619 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 NUTM2BA6NNL0 878 aaPredicted RBP11.44□□□□□ -0.58
SOD2-216ENST00000546260 NUTM2EB1AL46 878 aaPredicted RBP11.44□□□□□ -0.58
SOD2-216ENST00000546260 AGPSO00116 658 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 NCK2O43639 380 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 ADD1P35611 737 aaKnown RBP11.44□□□□□ -0.58
SOD2-216ENST00000546260 SCNN1BP51168 640 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms