RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 ADAMTS5Q9UNA0 930 aa27.13■■□□□ 1.93
CHD4-214ENST00000545942 FAM83BQ5T0W9 1011 aa27.12■■□□□ 1.93
CHD4-214ENST00000545942 ABRAQ8N0Z2 381 aa27.12■■□□□ 1.93
CHD4-214ENST00000545942 PRDM1O75626 825 aa27.11■■□□□ 1.93
CHD4-214ENST00000545942 SLC25A27O95847 323 aa27.11■■□□□ 1.93
CHD4-214ENST00000545942 TMEM132BQ14DG7 1078 aa27.11■■□□□ 1.93
CHD4-214ENST00000545942 NAPBQ9H115 298 aa27.11■■□□□ 1.93
CHD4-214ENST00000545942 SLC5A4Q9NY91 659 aa27.11■■□□□ 1.93
CHD4-214ENST00000545942 STAP2Q9UGK3 403 aa27.11■■□□□ 1.93
CHD4-214ENST00000545942 PPP1R9AQ9ULJ8 1098 aa27.11■■□□□ 1.93
CHD4-214ENST00000545942 CEP290O15078 2479 aa27.1■■□□□ 1.93
CHD4-214ENST00000545942 GREB1LQ9C091 1923 aaPredicted RBP27.1■■□□□ 1.93
CHD4-214ENST00000545942 CYP2C19P33261 490 aa27.1■■□□□ 1.93
CHD4-214ENST00000545942 FXR1P51114 621 aaKnown RBP eCLIP27.1■■□□□ 1.936e-7■■■■□ 26.2
CHD4-214ENST00000545942 OLFML2BQ68BL8 750 aa27.1■■□□□ 1.93
CHD4-214ENST00000545942 ZNF236Q9UL36 1845 aa27.09■■□□□ 1.93
CHD4-214ENST00000545942 IGKV6D-41A0A0C4DH26 115 aa27.09■■□□□ 1.93
CHD4-214ENST00000545942 VWA5AO00534 786 aa27.09■■□□□ 1.93
CHD4-214ENST00000545942 IGHA2P01877 340 aa27.09■■□□□ 1.93
CHD4-214ENST00000545942 SLC3A2P08195 630 aaKnown RBP27.09■■□□□ 1.93
CHD4-214ENST00000545942 PDE1AP54750 535 aa27.09■■□□□ 1.93
CHD4-214ENST00000545942 EVI5LQ96CN4 794 aa27.09■■□□□ 1.93
CHD4-214ENST00000545942 RBM27Q9P2N5 1060 aaKnown RBP27.09■■□□□ 1.93
CHD4-214ENST00000545942 CLIP2Q9UDT6 1046 aa27.09■■□□□ 1.93
CHD4-214ENST00000545942 F5H6K3 240 aa27.08■■□□□ 1.93
CHD4-214ENST00000545942 MSCO60682 206 aa27.08■■□□□ 1.93
CHD4-214ENST00000545942 COBLO75128 1261 aa27.08■■□□□ 1.93
CHD4-214ENST00000545942 FCER1AP12319 257 aa27.08■■□□□ 1.93
CHD4-214ENST00000545942 CNGA1P29973 690 aa27.08■■□□□ 1.93
CHD4-214ENST00000545942 PDE4BQ07343 736 aa27.08■■□□□ 1.93
CHD4-214ENST00000545942 KLRC3Q07444 240 aa27.08■■□□□ 1.93
CHD4-214ENST00000545942 RIOX2Q8IUF8 465 aa27.08■■□□□ 1.93
CHD4-214ENST00000545942 DDX20Q9UHI6 824 aaKnown RBP27.08■■□□□ 1.93
CHD4-214ENST00000545942 NDUFB10O96000 172 aa27.07■■□□□ 1.92
CHD4-214ENST00000545942 PPARAQ07869 468 aa27.07■■□□□ 1.92
CHD4-214ENST00000545942 NUP88Q99567 741 aaPredicted RBP27.07■■□□□ 1.92
CHD4-214ENST00000545942 MTMR4Q9NYA4 1195 aa27.07■■□□□ 1.92
CHD4-214ENST00000545942 PFASO15067 1338 aa27.07■■□□□ 1.92
CHD4-214ENST00000545942 CYBAP13498 195 aa27.06■■□□□ 1.92
CHD4-214ENST00000545942 STAT3P40763 770 aa27.06■■□□□ 1.92
CHD4-214ENST00000545942 C7orf61Q8IZ16 206 aa27.06■■□□□ 1.92
CHD4-214ENST00000545942 MKL1Q969V6 931 aa27.06■■□□□ 1.92
CHD4-214ENST00000545942 CEP95Q96GE4 821 aa27.06■■□□□ 1.92
CHD4-214ENST00000545942 SLF1Q9BQI6 1058 aa27.06■■□□□ 1.92
CHD4-214ENST00000545942 PRO3102Q9H379 93 aa27.06■■□□□ 1.92
CHD4-214ENST00000545942 PCDH10Q9P2E7 1040 aa27.06■■□□□ 1.92
CHD4-214ENST00000545942 ZNF214Q9UL59 606 aaPredicted RBP27.06■■□□□ 1.92
CHD4-214ENST00000545942 SYNPO2Q9UMS6 1093 aa27.06■■□□□ 1.92
CHD4-214ENST00000545942 PLIN4Q96Q06 1357 aa27.05■■□□□ 1.92
CHD4-214ENST00000545942 TTLL1O95922 423 aa27.05■■□□□ 1.92
CHD4-214ENST00000545942 TSPY3P0CV98 308 aa27.05■■□□□ 1.92
CHD4-214ENST00000545942 TSPY8P0CW00 308 aa27.05■■□□□ 1.92
CHD4-214ENST00000545942 COL6A1P12109 1028 aa27.05■■□□□ 1.92
CHD4-214ENST00000545942 COPB2P35606 906 aa27.05■■□□□ 1.92
CHD4-214ENST00000545942 CCDC129Q6ZRS4 1044 aa27.05■■□□□ 1.92
CHD4-214ENST00000545942 TRPV1Q8NER1 839 aa27.05■■□□□ 1.92
CHD4-214ENST00000545942 REPS2Q8NFH8 660 aa27.05■■□□□ 1.92
CHD4-214ENST00000545942 PARP14Q460N5 1801 aa27.05■■□□□ 1.92
CHD4-214ENST00000545942 NEDD1Q8NHV4 660 aa27.04■■□□□ 1.92
CHD4-214ENST00000545942 MMP19Q99542 508 aa27.04■■□□□ 1.92
CHD4-214ENST00000545942 FOXP2O15409 715 aa27.03■■□□□ 1.92
CHD4-214ENST00000545942 KCTD2Q14681 263 aa27.03■■□□□ 1.92
CHD4-214ENST00000545942 FAM47AQ5JRC9 791 aa27.03■■□□□ 1.92
CHD4-214ENST00000545942 PRPF38AQ8NAV1 312 aaKnown RBP27.03■■□□□ 1.92
CHD4-214ENST00000545942 MAML3Q96JK9 1138 aa27.03■■□□□ 1.92
CHD4-214ENST00000545942 RWDD1Q9H446 243 aaPredicted RBP27.03■■□□□ 1.92
CHD4-214ENST00000545942 HELLSQ9NRZ9 838 aa27.03■■□□□ 1.92
CHD4-214ENST00000545942 TFAP4Q01664 338 aa27.02■■□□□ 1.92
CHD4-214ENST00000545942 TICAM2Q86XR7 235 aa27.02■■□□□ 1.92
CHD4-214ENST00000545942 LNPKQ9C0E8 428 aa27.02■■□□□ 1.92
CHD4-214ENST00000545942 SMC5Q8IY18 1101 aa27.01■■□□□ 1.91
CHD4-214ENST00000545942 LRRC47Q8N1G4 583 aaKnown RBP27.01■■□□□ 1.91
CHD4-214ENST00000545942 GMCL1P1Q8NEA9 526 aa27.01■■□□□ 1.91
CHD4-214ENST00000545942 TEX13BQ9BXU2 312 aa27.01■■□□□ 1.91
CHD4-214ENST00000545942 ALPK3Q96L96 1907 aa27■■□□□ 1.91
CHD4-214ENST00000545942 FEM1BQ9UK73 627 aa27■■□□□ 1.91
CHD4-214ENST00000545942 RANBP2P49792 3224 aaKnown RBP27■■□□□ 1.91
CHD4-214ENST00000545942 SEPT4O43236 478 aa26.99■■□□□ 1.91
CHD4-214ENST00000545942 PGK2P07205 417 aa26.99■■□□□ 1.91
CHD4-214ENST00000545942 PPP4R3BQ5MIZ7 849 aa26.99■■□□□ 1.91
CHD4-214ENST00000545942 VPS53Q5VIR6 699 aa26.99■■□□□ 1.91
CHD4-214ENST00000545942 SNRNP48Q6IEG0 339 aaKnown RBP26.99■■□□□ 1.91
CHD4-214ENST00000545942 ZMYND8Q9ULU4 1186 aaPredicted RBP26.99■■□□□ 1.91
CHD4-214ENST00000545942 DIS3Q9Y2L1 958 aaKnown RBP26.99■■□□□ 1.91
CHD4-214ENST00000545942 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.99■■□□□ 1.91
CHD4-214ENST00000545942 CTDP1Q9Y5B0 961 aaPredicted RBP26.99■■□□□ 1.91
CHD4-214ENST00000545942 COL11A1P12107 1806 aaPredicted RBP26.98■■□□□ 1.91
CHD4-214ENST00000545942 A0A1W2PPC1 479 aa26.98■■□□□ 1.91
CHD4-214ENST00000545942 DNM1LO00429 736 aa26.98■■□□□ 1.91
CHD4-214ENST00000545942 ATP2A1O14983 1001 aa26.98■■□□□ 1.91
CHD4-214ENST00000545942 ZBED4O75132 1171 aa26.98■■□□□ 1.91
CHD4-214ENST00000545942 CTDSPL2Q05D32 466 aa26.98■■□□□ 1.91
CHD4-214ENST00000545942 KIFC2Q96AC6 838 aa26.98■■□□□ 1.91
CHD4-214ENST00000545942 ANAPC4Q9UJX5 808 aa26.98■■□□□ 1.91
CHD4-214ENST00000545942 TRIOBPQ9H2D6 2365 aa26.98■■□□□ 1.91
CHD4-214ENST00000545942 TSPY2A6NKD2 308 aa26.97■■□□□ 1.91
CHD4-214ENST00000545942 ALX1Q15699 326 aa26.97■■□□□ 1.91
CHD4-214ENST00000545942 LRRC26Q2I0M4 334 aa26.97■■□□□ 1.91
CHD4-214ENST00000545942 ZNF792Q3KQV3 632 aa26.97■■□□□ 1.91
CHD4-214ENST00000545942 MCMDC2Q4G0Z9 681 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms