RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 POU3F3P20264 500 aaPredicted RBP18.98■□□□□ 0.63
CLSTN3-216ENST00000545663 COG2Q14746 738 aa18.98■□□□□ 0.63
CLSTN3-216ENST00000545663 CCDC184Q52MB2 194 aa18.98■□□□□ 0.63
CLSTN3-216ENST00000545663 KLHDC9Q8NEP7 349 aa18.98■□□□□ 0.63
CLSTN3-216ENST00000545663 TINF2Q9BSI4 451 aa18.98■□□□□ 0.63
CLSTN3-216ENST00000545663 TRIOO75962 3097 aa18.98■□□□□ 0.63
CLSTN3-216ENST00000545663 UMODL1Q5DID0 1318 aa18.98■□□□□ 0.63
CLSTN3-216ENST00000545663 TATDN1Q6P1N9 297 aa18.97■□□□□ 0.63
CLSTN3-216ENST00000545663 WDR63Q8IWG1 891 aa18.97■□□□□ 0.63
CLSTN3-216ENST00000545663 ABRAQ8N0Z2 381 aa18.97■□□□□ 0.63
CLSTN3-216ENST00000545663 ANKS1AQ92625 1134 aa18.97■□□□□ 0.63
CLSTN3-216ENST00000545663 NOL10Q9BSC4 688 aaKnown RBP18.97■□□□□ 0.63
CLSTN3-216ENST00000545663 MROH8Q9H579 483 aa18.97■□□□□ 0.63
CLSTN3-216ENST00000545663 HOXC10Q9NYD6 342 aa18.97■□□□□ 0.63
CLSTN3-216ENST00000545663 LRP2BPQ9P2M1 347 aa18.97■□□□□ 0.63
CLSTN3-216ENST00000545663 NRBP1Q9UHY1 535 aa18.97■□□□□ 0.63
CLSTN3-216ENST00000545663 PCDHA11Q9Y5I1 949 aa18.97■□□□□ 0.63
CLSTN3-216ENST00000545663 GTPBP6O43824 516 aaPredicted RBP18.96■□□□□ 0.63
CLSTN3-216ENST00000545663 FCER1AP12319 257 aa18.96■□□□□ 0.63
CLSTN3-216ENST00000545663 AKR1A1P14550 325 aa18.96■□□□□ 0.63
CLSTN3-216ENST00000545663 TFCP2Q12800 502 aa18.96■□□□□ 0.63
CLSTN3-216ENST00000545663 MVPQ14764 893 aaKnown RBP18.96■□□□□ 0.63
CLSTN3-216ENST00000545663 VTI1AQ96AJ9 217 aa18.96■□□□□ 0.63
CLSTN3-216ENST00000545663 PHOX2BQ99453 314 aa18.96■□□□□ 0.63
CLSTN3-216ENST00000545663 MOXD2PA6NHM9 499 aa18.95■□□□□ 0.62
CLSTN3-216ENST00000545663 BAG3O95817 575 aa18.95■□□□□ 0.62
CLSTN3-216ENST00000545663 GUCY1A2P33402 732 aa18.95■□□□□ 0.62
CLSTN3-216ENST00000545663 PPP4CP60510 307 aa18.95■□□□□ 0.62
CLSTN3-216ENST00000545663 KIAA1755Q5JYT7 1200 aa18.95■□□□□ 0.62
CLSTN3-216ENST00000545663 FAM126BQ8IXS8 530 aa18.95■□□□□ 0.62
CLSTN3-216ENST00000545663 MRPL50Q8N5N7 158 aaKnown RBP18.95■□□□□ 0.62
CLSTN3-216ENST00000545663 NEUROD6Q96NK8 337 aa18.95■□□□□ 0.62
CLSTN3-216ENST00000545663 TANGO6Q9C0B7 1094 aa18.95■□□□□ 0.62
CLSTN3-216ENST00000545663 MTIF3Q9H2K0 278 aaKnown RBP18.95■□□□□ 0.62
CLSTN3-216ENST00000545663 SLC4A7Q9Y6M7 1214 aa18.95■□□□□ 0.62
CLSTN3-216ENST00000545663 A0A1W2PRG0 241 aa18.94■□□□□ 0.62
CLSTN3-216ENST00000545663 ARVCFO00192 962 aa18.94■□□□□ 0.62
CLSTN3-216ENST00000545663 HLA-DOAP06340 250 aa18.94■□□□□ 0.62
CLSTN3-216ENST00000545663 CA3P07451 260 aa18.94■□□□□ 0.62
CLSTN3-216ENST00000545663 CCL23P55773 120 aa18.94■□□□□ 0.62
CLSTN3-216ENST00000545663 DYNLL1P63167 89 aaKnown RBP18.94■□□□□ 0.62
CLSTN3-216ENST00000545663 ABCB5Q2M3G0 1257 aa18.94■□□□□ 0.62
CLSTN3-216ENST00000545663 ZNF792Q3KQV3 632 aa18.94■□□□□ 0.62
CLSTN3-216ENST00000545663 GLT1D1Q96MS3 346 aa18.94■□□□□ 0.62
CLSTN3-216ENST00000545663 ELP1O95163 1332 aa18.94■□□□□ 0.62
CLSTN3-216ENST00000545663 MROH7Q68CQ1 1323 aa18.94■□□□□ 0.62
CLSTN3-216ENST00000545663 ARHGEF15O94989 841 aa18.93■□□□□ 0.62
CLSTN3-216ENST00000545663 ASGR1P07306 291 aa18.93■□□□□ 0.62
CLSTN3-216ENST00000545663 CERKLQ49MI3 558 aaPredicted RBP18.93■□□□□ 0.62
CLSTN3-216ENST00000545663 NAA16Q6N069 864 aaPredicted RBP18.93■□□□□ 0.62
CLSTN3-216ENST00000545663 SAMD1Q6SPF0 538 aaPredicted RBP18.93■□□□□ 0.62
CLSTN3-216ENST00000545663 VWCEQ96DN2 955 aa18.93■□□□□ 0.62
CLSTN3-216ENST00000545663 ATG4CQ96DT6 458 aa18.93■□□□□ 0.62
CLSTN3-216ENST00000545663 ROBO3Q96MS0 1386 aa18.93■□□□□ 0.62
CLSTN3-216ENST00000545663 CD4P01730 458 aa18.92■□□□□ 0.62
CLSTN3-216ENST00000545663 ATP2A2P16615 1042 aaKnown RBP18.92■□□□□ 0.62
CLSTN3-216ENST00000545663 MCAMP43121 646 aa18.92■□□□□ 0.62
CLSTN3-216ENST00000545663 GJD3Q8N144 294 aa18.92■□□□□ 0.62
CLSTN3-216ENST00000545663 ARNTL2Q8WYA1 636 aa18.92■□□□□ 0.62
CLSTN3-216ENST00000545663 MMP19Q99542 508 aa18.92■□□□□ 0.62
CLSTN3-216ENST00000545663 COPRSQ9NQ92 184 aa18.92■□□□□ 0.62
CLSTN3-216ENST00000545663 SNRKQ9NRH2 765 aa18.92■□□□□ 0.62
CLSTN3-216ENST00000545663 CDK5RAP2Q96SN8 1893 aa18.91■□□□□ 0.62
CLSTN3-216ENST00000545663 ZBBXA8MT70 800 aa18.91■□□□□ 0.62
CLSTN3-216ENST00000545663 ADCY6O43306 1168 aa18.91■□□□□ 0.62
CLSTN3-216ENST00000545663 PLCG2P16885 1265 aa18.91■□□□□ 0.62
CLSTN3-216ENST00000545663 DSG3P32926 999 aa18.91■□□□□ 0.62
CLSTN3-216ENST00000545663 SEPT2Q15019 361 aa18.91■□□□□ 0.62
CLSTN3-216ENST00000545663 ATF7IPQ6VMQ6 1270 aa18.91■□□□□ 0.62
CLSTN3-216ENST00000545663 SPRED2Q7Z698 418 aa18.91■□□□□ 0.62
CLSTN3-216ENST00000545663 HIPK3Q9H422 1215 aa18.91■□□□□ 0.62
CLSTN3-216ENST00000545663 CNPY2Q9Y2B0 182 aa18.91■□□□□ 0.62
CLSTN3-216ENST00000545663 BRWD1Q9NSI6 2320 aa18.91■□□□□ 0.62
CLSTN3-216ENST00000545663 ZNFX1Q9P2E3 1918 aaKnown RBP18.9■□□□□ 0.62
CLSTN3-216ENST00000545663 A0A0U1RQG5 324 aaPredicted RBP18.9■□□□□ 0.62
CLSTN3-216ENST00000545663 TLR3O15455 904 aaKnown RBP18.9■□□□□ 0.62
CLSTN3-216ENST00000545663 C6orf222P0C671 652 aaPredicted RBP18.9■□□□□ 0.62
CLSTN3-216ENST00000545663 TMEM132BQ14DG7 1078 aa18.9■□□□□ 0.62
CLSTN3-216ENST00000545663 CSPP1Q1MSJ5 1256 aa18.9■□□□□ 0.62
CLSTN3-216ENST00000545663 TMEM67Q5HYA8 995 aa18.9■□□□□ 0.62
CLSTN3-216ENST00000545663 GORABQ5T7V8 394 aa18.9■□□□□ 0.62
CLSTN3-216ENST00000545663 FAM184BQ9ULE4 1060 aa18.9■□□□□ 0.62
CLSTN3-216ENST00000545663 A0A0G2JMZ2 1700 aa18.89■□□□□ 0.61
CLSTN3-216ENST00000545663 SNAI1O95863 264 aaPredicted RBP18.89■□□□□ 0.61
CLSTN3-216ENST00000545663 ARID4AP29374 1257 aaPredicted RBP18.89■□□□□ 0.61
CLSTN3-216ENST00000545663 TTLL4Q14679 1199 aa18.89■□□□□ 0.61
CLSTN3-216ENST00000545663 FAM178BQ8IXR5 827 aa18.89■□□□□ 0.61
CLSTN3-216ENST00000545663 MB21D1Q8N884 522 aa18.89■□□□□ 0.61
CLSTN3-216ENST00000545663 WNT8AQ9H1J5 351 aa18.89■□□□□ 0.61
CLSTN3-216ENST00000545663 SERPINB13Q9UIV8 391 aa18.89■□□□□ 0.61
CLSTN3-216ENST00000545663 AKAP2Q9Y2D5 859 aa18.89■□□□□ 0.61
CLSTN3-216ENST00000545663 FLOT1O75955 427 aa18.88■□□□□ 0.61
CLSTN3-216ENST00000545663 UBTFL1P0CB47 393 aaPredicted RBP18.88■□□□□ 0.61
CLSTN3-216ENST00000545663 SHMT1P34896 483 aa18.88■□□□□ 0.61
CLSTN3-216ENST00000545663 GRB10Q13322 594 aa18.88■□□□□ 0.61
CLSTN3-216ENST00000545663 CABP5Q9NP86 173 aa18.88■□□□□ 0.61
CLSTN3-216ENST00000545663 ZHX1Q9UKY1 873 aaPredicted RBP18.88■□□□□ 0.61
CLSTN3-216ENST00000545663 DIS3Q9Y2L1 958 aaKnown RBP18.88■□□□□ 0.61
CLSTN3-216ENST00000545663 C5orf42Q9H799 3197 aa18.87■□□□□ 0.61
CLSTN3-216ENST00000545663 LPXNO60711 386 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms