RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 GIMAP6Q6P9H5 292 aa16.93■□□□□ 0.3
DDX11-228ENST00000545115 ARRDC4Q8NCT1 418 aa16.93■□□□□ 0.3
DDX11-228ENST00000545115 ADAMTS5Q9UNA0 930 aa16.93■□□□□ 0.3
DDX11-228ENST00000545115 PARP14Q460N5 1801 aa16.93■□□□□ 0.3
DDX11-228ENST00000545115 ROBO3Q96MS0 1386 aa16.92■□□□□ 0.3
DDX11-228ENST00000545115 KBTBD13C9JR72 458 aa16.92■□□□□ 0.3
DDX11-228ENST00000545115 RAD21O60216 631 aa16.92■□□□□ 0.3
DDX11-228ENST00000545115 ATN1P54259 1190 aaPredicted RBP16.92■□□□□ 0.3
DDX11-228ENST00000545115 MDM2Q00987 491 aaPredicted RBP16.92■□□□□ 0.3
DDX11-228ENST00000545115 RIOX2Q8IUF8 465 aa16.92■□□□□ 0.3
DDX11-228ENST00000545115 APPBP2Q92624 585 aa16.92■□□□□ 0.3
DDX11-228ENST00000545115 MAML3Q96JK9 1138 aa16.92■□□□□ 0.3
DDX11-228ENST00000545115 DCTPP1Q9H773 170 aa16.92■□□□□ 0.3
DDX11-228ENST00000545115 FBXO28Q9NVF7 368 aa16.92■□□□□ 0.3
DDX11-228ENST00000545115 PPP1R9AQ9ULJ8 1098 aa16.92■□□□□ 0.3
DDX11-228ENST00000545115 GSG1L2A8MUP6 293 aa16.91■□□□□ 0.3
DDX11-228ENST00000545115 VWA5AO00534 786 aa16.91■□□□□ 0.3
DDX11-228ENST00000545115 ZFYP08048 801 aaPredicted RBP16.91■□□□□ 0.3
DDX11-228ENST00000545115 COPB2P35606 906 aa16.91■□□□□ 0.3
DDX11-228ENST00000545115 FAM83BQ5T0W9 1011 aa16.91■□□□□ 0.3
DDX11-228ENST00000545115 GJC2Q5T442 439 aaPredicted RBP16.91■□□□□ 0.3
DDX11-228ENST00000545115 OSBP2Q969R2 916 aa16.91■□□□□ 0.3
DDX11-228ENST00000545115 MMP19Q99542 508 aa16.91■□□□□ 0.3
DDX11-228ENST00000545115 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.91■□□□□ 0.3
DDX11-228ENST00000545115 GREB1LQ9C091 1923 aaPredicted RBP16.9■□□□□ 0.3
DDX11-228ENST00000545115 RNF113AO15541 343 aaKnown RBP16.9■□□□□ 0.3
DDX11-228ENST00000545115 RASA1P20936 1047 aa16.9■□□□□ 0.3
DDX11-228ENST00000545115 STAT3P40763 770 aa16.9■□□□□ 0.3
DDX11-228ENST00000545115 RTP1P59025 263 aa16.9■□□□□ 0.3
DDX11-228ENST00000545115 KCTD2Q14681 263 aa16.9■□□□□ 0.3
DDX11-228ENST00000545115 ANO1Q5XXA6 986 aa16.9■□□□□ 0.3
DDX11-228ENST00000545115 TSHZ3Q63HK5 1081 aa16.9■□□□□ 0.3
DDX11-228ENST00000545115 LBHD1Q9BQE6 289 aaPredicted RBP16.9■□□□□ 0.3
DDX11-228ENST00000545115 MKNK2Q9HBH9 465 aa16.9■□□□□ 0.3
DDX11-228ENST00000545115 NYAP2Q9P242 653 aa16.9■□□□□ 0.3
DDX11-228ENST00000545115 PRKAG2Q9UGJ0 569 aa16.9■□□□□ 0.3
DDX11-228ENST00000545115 NRBP1Q9UHY1 535 aa16.9■□□□□ 0.3
DDX11-228ENST00000545115 ZNF214Q9UL59 606 aaPredicted RBP16.9■□□□□ 0.3
DDX11-228ENST00000545115 MINDY4BA8MYZ0 360 aa16.89■□□□□ 0.29
DDX11-228ENST00000545115 GPAA1O43292 621 aa16.89■□□□□ 0.29
DDX11-228ENST00000545115 GNAT2P19087 354 aa16.89■□□□□ 0.29
DDX11-228ENST00000545115 LRRFIP1Q32MZ4 808 aaKnown RBP16.89■□□□□ 0.29
DDX11-228ENST00000545115 PRAMEF19Q5SWL8 479 aa16.89■□□□□ 0.29
DDX11-228ENST00000545115 DEFB123Q8N688 67 aa16.89■□□□□ 0.29
DDX11-228ENST00000545115 REPS2Q8NFH8 660 aa16.89■□□□□ 0.29
DDX11-228ENST00000545115 EPB41L4AQ9HCS5 686 aaPredicted RBP16.89■□□□□ 0.29
DDX11-228ENST00000545115 DIS3Q9Y2L1 958 aaKnown RBP16.89■□□□□ 0.29
DDX11-228ENST00000545115 COL11A1P12107 1806 aaPredicted RBP16.89■□□□□ 0.29
DDX11-228ENST00000545115 MYCNP04198 464 aaPredicted RBP16.88■□□□□ 0.29
DDX11-228ENST00000545115 PGK2P07205 417 aa16.88■□□□□ 0.29
DDX11-228ENST00000545115 TDO2P48775 406 aa16.88■□□□□ 0.29
DDX11-228ENST00000545115 FAM47AQ5JRC9 791 aa16.88■□□□□ 0.29
DDX11-228ENST00000545115 SLC39A5Q6ZMH5 540 aa16.88■□□□□ 0.29
DDX11-228ENST00000545115 STK11IPQ8N1F8 1099 aa16.88■□□□□ 0.29
DDX11-228ENST00000545115 SLF1Q9BQI6 1058 aa16.88■□□□□ 0.29
DDX11-228ENST00000545115 ZNF287Q9HBT7 754 aa16.88■□□□□ 0.29
DDX11-228ENST00000545115 ATP11BQ9Y2G3 1177 aa16.88■□□□□ 0.29
DDX11-228ENST00000545115 F5H6K3 240 aa16.87■□□□□ 0.29
DDX11-228ENST00000545115 KLRC3Q07444 240 aa16.87■□□□□ 0.29
DDX11-228ENST00000545115 SNX17Q15036 470 aa16.87■□□□□ 0.29
DDX11-228ENST00000545115 LRRC41Q15345 812 aa16.87■□□□□ 0.29
DDX11-228ENST00000545115 ZNF792Q3KQV3 632 aa16.87■□□□□ 0.29
DDX11-228ENST00000545115 NUP88Q99567 741 aaPredicted RBP16.87■□□□□ 0.29
DDX11-228ENST00000545115 TINF2Q9BSI4 451 aa16.87■□□□□ 0.29
DDX11-228ENST00000545115 TEX13BQ9BXU2 312 aa16.87■□□□□ 0.29
DDX11-228ENST00000545115 TTC41PQ6P2S7 1318 aa16.87■□□□□ 0.29
DDX11-228ENST00000545115 IGKV6D-41A0A0C4DH26 115 aa16.86■□□□□ 0.29
DDX11-228ENST00000545115 M0R2C6 588 aa16.86■□□□□ 0.29
DDX11-228ENST00000545115 ERC2O15083 957 aa16.86■□□□□ 0.29
DDX11-228ENST00000545115 NDUFB10O96000 172 aa16.86■□□□□ 0.29
DDX11-228ENST00000545115 APPP05067 770 aa16.86■□□□□ 0.29
DDX11-228ENST00000545115 RARBP10826 455 aa16.86■□□□□ 0.29
DDX11-228ENST00000545115 Q7L0L9 218 aa16.86■□□□□ 0.29
DDX11-228ENST00000545115 ZNF444Q8N0Y2 327 aaPredicted RBP16.86■□□□□ 0.29
DDX11-228ENST00000545115 PRPF38AQ8NAV1 312 aaKnown RBP16.86■□□□□ 0.29
DDX11-228ENST00000545115 XPNPEP3Q9NQH7 507 aa16.86■□□□□ 0.29
DDX11-228ENST00000545115 PATL2C9JE40 543 aaKnown RBP16.85■□□□□ 0.29
DDX11-228ENST00000545115 PRDM1O75626 825 aa16.85■□□□□ 0.29
DDX11-228ENST00000545115 ADCYAP1R1P41586 468 aa16.85■□□□□ 0.29
DDX11-228ENST00000545115 TRIM60Q495X7 471 aa16.85■□□□□ 0.29
DDX11-228ENST00000545115 C1orf53Q5VUE5 145 aa16.85■□□□□ 0.29
DDX11-228ENST00000545115 SNRNP48Q6IEG0 339 aaKnown RBP16.85■□□□□ 0.29
DDX11-228ENST00000545115 SLC17A8Q8NDX2 589 aa16.85■□□□□ 0.29
DDX11-228ENST00000545115 NACAP1Q9BZK3 213 aa16.85■□□□□ 0.29
DDX11-228ENST00000545115 CLIP2Q9UDT6 1046 aa16.85■□□□□ 0.29
DDX11-228ENST00000545115 SYNPO2Q9UMS6 1093 aa16.85■□□□□ 0.29
DDX11-228ENST00000545115 CNPY2Q9Y2B0 182 aa16.85■□□□□ 0.29
DDX11-228ENST00000545115 ZNFX1Q9P2E3 1918 aaKnown RBP16.84■□□□□ 0.29
DDX11-228ENST00000545115 ATP2A1O14983 1001 aa16.84■□□□□ 0.29
DDX11-228ENST00000545115 RNF180Q86T96 592 aa16.84■□□□□ 0.29
DDX11-228ENST00000545115 IFNL3Q8IZI9 196 aa16.84■□□□□ 0.29
DDX11-228ENST00000545115 MSL3Q8N5Y2 521 aaKnown RBP16.84■□□□□ 0.29
DDX11-228ENST00000545115 PI4K2BQ8TCG2 481 aa16.84■□□□□ 0.29
DDX11-228ENST00000545115 MKL1Q969V6 931 aa16.84■□□□□ 0.29
DDX11-228ENST00000545115 FERMT2Q96AC1 680 aa16.84■□□□□ 0.29
DDX11-228ENST00000545115 CEP95Q96GE4 821 aa16.84■□□□□ 0.29
DDX11-228ENST00000545115 PRDM5Q9NQX1 630 aaPredicted RBP16.84■□□□□ 0.29
DDX11-228ENST00000545115 MTMR10Q9NXD2 777 aa16.84■□□□□ 0.29
DDX11-228ENST00000545115 MTMR4Q9NYA4 1195 aa16.84■□□□□ 0.29
DDX11-228ENST00000545115 PHF24Q9UPV7 400 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms