RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 N4BP3O15049 544 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 MFAP3LO75121 409 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 LDHBP07195 334 aaKnown RBP14.73□□□□□ -0.05
CPSF7-223ENST00000544669 HMGB2P26583 209 aaKnown RBP14.73□□□□□ -0.05
CPSF7-223ENST00000544669 USP5P45974 858 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 ADKP55263 362 aaKnown RBP14.73□□□□□ -0.05
CPSF7-223ENST00000544669 GRM4Q14833 912 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 NPY5RQ15761 445 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 C12orf60Q5U649 245 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 CYP26C1Q6V0L0 522 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 C15orf52Q6ZUT6 534 aaKnown RBP14.73□□□□□ -0.05
CPSF7-223ENST00000544669 USP49Q70CQ1 688 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 TRMT44Q8IYL2 757 aaKnown RBP14.73□□□□□ -0.05
CPSF7-223ENST00000544669 GOLGA1Q92805 767 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 CCSER1Q9C0I3 900 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 MKNK2Q9HBH9 465 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 MCM9Q9NXL9 1143 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 MRFAP1Q9Y605 127 aa14.73□□□□□ -0.05
CPSF7-223ENST00000544669 NRAPQ86VF7 1730 aa14.72□□□□□ -0.05
CPSF7-223ENST00000544669 KDM4FA0A1W2PPD8 638 aa14.72□□□□□ -0.05
CPSF7-223ENST00000544669 hCG_1984214I3L0E3 225 aa14.72□□□□□ -0.05
CPSF7-223ENST00000544669 PRDM1O75626 825 aa14.72□□□□□ -0.05
CPSF7-223ENST00000544669 RPN1P04843 607 aaKnown RBP14.72□□□□□ -0.05
CPSF7-223ENST00000544669 EEF1GP26641 437 aaKnown RBP14.72□□□□□ -0.05
CPSF7-223ENST00000544669 STAT6P42226 847 aa14.72□□□□□ -0.05
CPSF7-223ENST00000544669 NAA30Q147X3 362 aaPredicted RBP14.72□□□□□ -0.05
CPSF7-223ENST00000544669 TEX35Q5T0J7 233 aa14.72□□□□□ -0.05
CPSF7-223ENST00000544669 PDXDC2PQ6P474 469 aa14.72□□□□□ -0.05
CPSF7-223ENST00000544669 APTXQ7Z2E3 356 aaKnown RBP14.72□□□□□ -0.05
CPSF7-223ENST00000544669 ZNF713Q8N859 430 aaPredicted RBP14.72□□□□□ -0.05
CPSF7-223ENST00000544669 COL1A1P02452 1464 aaPredicted RBP14.72□□□□□ -0.05
CPSF7-223ENST00000544669 GNA11P29992 359 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 UBA7P41226 1012 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 AMPD3Q01432 767 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 TFAP4Q01664 338 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 PPP2R3AQ06190 1150 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 ZNF827Q17R98 1081 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 KLHL10Q6JEL2 608 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 ZNF804AQ7Z570 1209 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 FAM114A1Q8IWE2 563 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 GRAMD1CQ8IYS0 662 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 LINC00116Q8NCU8 138 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 PNMA1Q8ND90 353 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 NUP58Q9BVL2 599 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 ADGRG1Q9Y653 693 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 COL5A3P25940 1745 aaPredicted RBP14.71□□□□□ -0.05
CPSF7-223ENST00000544669 SCN7AQ01118 1682 aa14.71□□□□□ -0.05
CPSF7-223ENST00000544669 A0A1W2PQC6 194 aa14.71□□□□□ -0.06
CPSF7-223ENST00000544669 PSMA7O14818 248 aa14.71□□□□□ -0.06
CPSF7-223ENST00000544669 MCM7P33993 719 aa14.71□□□□□ -0.06
CPSF7-223ENST00000544669 PIP4K2BP78356 416 aa14.71□□□□□ -0.06
CPSF7-223ENST00000544669 RBL2Q08999 1139 aa14.71□□□□□ -0.06
CPSF7-223ENST00000544669 BRD3Q15059 726 aa14.71□□□□□ -0.06
CPSF7-223ENST00000544669 TBC1D9BQ66K14 1250 aa14.71□□□□□ -0.06
CPSF7-223ENST00000544669 KRT25Q7Z3Z0 450 aa14.71□□□□□ -0.06
CPSF7-223ENST00000544669 RETREG2Q8NC44 543 aa14.71□□□□□ -0.06
CPSF7-223ENST00000544669 PKNOX2Q96KN3 472 aa14.71□□□□□ -0.06
CPSF7-223ENST00000544669 CARD6Q9BX69 1037 aa14.71□□□□□ -0.06
CPSF7-223ENST00000544669 THAP9Q9H5L6 903 aa14.71□□□□□ -0.06
CPSF7-223ENST00000544669 MAGEC2Q9UBF1 373 aaPredicted RBP14.71□□□□□ -0.06
CPSF7-223ENST00000544669 PRDM4Q9UKN5 801 aa14.71□□□□□ -0.06
CPSF7-223ENST00000544669 RTCBQ9Y3I0 505 aaKnown RBP14.71□□□□□ -0.06
CPSF7-223ENST00000544669 A0A087X0B3 334 aa14.7□□□□□ -0.06
CPSF7-223ENST00000544669 BICDL2A1A5D9 508 aa14.7□□□□□ -0.06
CPSF7-223ENST00000544669 TSPY3P0CV98 308 aa14.7□□□□□ -0.06
CPSF7-223ENST00000544669 TSPY8P0CW00 308 aa14.7□□□□□ -0.06
CPSF7-223ENST00000544669 CLCN6P51797 869 aa14.7□□□□□ -0.06
CPSF7-223ENST00000544669 GPS2Q13227 327 aa14.7□□□□□ -0.06
CPSF7-223ENST00000544669 TCP11X2Q5H9J9 407 aa14.7□□□□□ -0.06
CPSF7-223ENST00000544669 EARS2Q5JPH6 523 aaKnown RBP14.7□□□□□ -0.06
CPSF7-223ENST00000544669 ZNF384Q8TF68 577 aa14.7□□□□□ -0.06
CPSF7-223ENST00000544669 DHTKD1Q96HY7 919 aaPredicted RBP14.7□□□□□ -0.06
CPSF7-223ENST00000544669 MED15Q96RN5 788 aa14.7□□□□□ -0.06
CPSF7-223ENST00000544669 DISC1Q9NRI5 854 aa14.7□□□□□ -0.06
CPSF7-223ENST00000544669 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.7□□□□□ -0.06
CPSF7-223ENST00000544669 V9GYY5 206 aaPredicted RBP14.7□□□□□ -0.06
CPSF7-223ENST00000544669 MAST2Q6P0Q8 1798 aa14.7□□□□□ -0.06
CPSF7-223ENST00000544669 CYP2D7A0A087X1C5 515 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 CTAGE9A4FU28 777 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 ERLIN1O75477 346 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 CD44P16070 742 aaKnown RBP14.69□□□□□ -0.06
CPSF7-223ENST00000544669 COPB1P53618 953 aaKnown RBP14.69□□□□□ -0.06
CPSF7-223ENST00000544669 FAM47AQ5JRC9 791 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 RCSD1Q6JBY9 416 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 TOGARAM2Q6ZUX3 1019 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 EHBP1Q8NDI1 1231 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 RASSF8Q8NHQ8 419 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 NELFBQ8WX92 580 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 SPZ1Q9BXG8 430 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 GBP3Q9H0R5 595 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 C6orf50Q9HD87 102 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 ARFGAP3Q9NP61 516 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 BARHL2Q9NY43 387 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 CTNND2Q9UQB3 1225 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 KAT6BQ8WYB5 2073 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 XDHP47989 1333 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 CCDC66A2RUB6 948 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 FAM205CA6NFA0 338 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 KCNJ18B7U540 433 aa14.69□□□□□ -0.06
CPSF7-223ENST00000544669 NPHP1O15259 732 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms