RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 EXOC6BQ9Y2D4 811 aa18.76■□□□□ 0.59
CD4-212ENST00000544344 ROBO3Q96MS0 1386 aa18.76■□□□□ 0.59
CD4-212ENST00000544344 ZNF532Q9HCE3 1301 aa18.75■□□□□ 0.59
CD4-212ENST00000544344 BAZ2AQ9UIF9 1905 aaKnown RBP18.75■□□□□ 0.59
CD4-212ENST00000544344 PGK1P00558 417 aa18.75■□□□□ 0.59
CD4-212ENST00000544344 CEP85Q6P2H3 762 aa18.75■□□□□ 0.59
CD4-212ENST00000544344 RNPC3Q96LT9 517 aaKnown RBP18.75■□□□□ 0.59
CD4-212ENST00000544344 A0A1W2PQ45 241 aaPredicted RBP18.74■□□□□ 0.59
CD4-212ENST00000544344 A0A1W2PQY0 241 aa18.74■□□□□ 0.59
CD4-212ENST00000544344 PGK2P07205 417 aa18.74■□□□□ 0.59
CD4-212ENST00000544344 ZNF865P0CJ78 1059 aaPredicted RBP18.74■□□□□ 0.59
CD4-212ENST00000544344 RARBP10826 455 aa18.74■□□□□ 0.59
CD4-212ENST00000544344 ICA1Q05084 483 aa18.74■□□□□ 0.59
CD4-212ENST00000544344 GRIN2CQ14957 1233 aa18.74■□□□□ 0.59
CD4-212ENST00000544344 TTF1Q15361 905 aaPredicted RBP18.74■□□□□ 0.59
CD4-212ENST00000544344 ZNF792Q3KQV3 632 aa18.74■□□□□ 0.59
CD4-212ENST00000544344 USP38Q8NB14 1042 aa18.74■□□□□ 0.59
CD4-212ENST00000544344 LENG1Q96BZ8 264 aaPredicted RBP18.74■□□□□ 0.59
CD4-212ENST00000544344 TINF2Q9BSI4 451 aa18.74■□□□□ 0.59
CD4-212ENST00000544344 FBXO28Q9NVF7 368 aa18.74■□□□□ 0.59
CD4-212ENST00000544344 SWAP70Q9UH65 585 aa18.74■□□□□ 0.59
CD4-212ENST00000544344 WDR46O15213 610 aaKnown RBP18.73■□□□□ 0.59
CD4-212ENST00000544344 ADAMTS4O75173 837 aa18.73■□□□□ 0.59
CD4-212ENST00000544344 SLC25A27O95847 323 aa18.73■□□□□ 0.59
CD4-212ENST00000544344 FAAP100Q0VG06 881 aa18.73■□□□□ 0.59
CD4-212ENST00000544344 RNF180Q86T96 592 aa18.73■□□□□ 0.59
CD4-212ENST00000544344 RIOX2Q8IUF8 465 aa18.73■□□□□ 0.59
CD4-212ENST00000544344 MMP19Q99542 508 aa18.73■□□□□ 0.59
CD4-212ENST00000544344 ARHGEF10LQ9HCE6 1279 aa18.73■□□□□ 0.59
CD4-212ENST00000544344 IL1RAPL2Q9NP60 686 aa18.73■□□□□ 0.59
CD4-212ENST00000544344 DIS3Q9Y2L1 958 aaKnown RBP18.73■□□□□ 0.59
CD4-212ENST00000544344 PRKAB2O43741 272 aa18.72■□□□□ 0.59
CD4-212ENST00000544344 PQBP1O60828 265 aaKnown RBP18.72■□□□□ 0.59
CD4-212ENST00000544344 RAG1P15918 1043 aa18.72■□□□□ 0.59
CD4-212ENST00000544344 SLFNL1Q499Z3 407 aa18.72■□□□□ 0.59
CD4-212ENST00000544344 ANKRD33Q7Z3H0 272 aa18.72■□□□□ 0.59
CD4-212ENST00000544344 ITPRIPQ8IWB1 547 aa18.72■□□□□ 0.59
CD4-212ENST00000544344 REPS2Q8NFH8 660 aa18.72■□□□□ 0.59
CD4-212ENST00000544344 ARMT1Q9H993 441 aa18.72■□□□□ 0.59
CD4-212ENST00000544344 ZNF214Q9UL59 606 aaPredicted RBP18.72■□□□□ 0.59
CD4-212ENST00000544344 CHD9Q3L8U1 2897 aa18.71■□□□□ 0.59
CD4-212ENST00000544344 CYP2D7A0A087X1C5 515 aa18.71■□□□□ 0.59
CD4-212ENST00000544344 DNAJB2P25686 324 aa18.71■□□□□ 0.59
CD4-212ENST00000544344 FPGSQ05932 587 aa18.71■□□□□ 0.59
CD4-212ENST00000544344 SAMD1Q6SPF0 538 aaPredicted RBP18.71■□□□□ 0.59
CD4-212ENST00000544344 ERC1Q8IUD2 1116 aa18.71■□□□□ 0.59
CD4-212ENST00000544344 TOX2Q96NM4 488 aa18.71■□□□□ 0.59
CD4-212ENST00000544344 SH2D4AQ9H788 454 aa18.71■□□□□ 0.59
CD4-212ENST00000544344 TMEM39AQ9NV64 488 aa18.71■□□□□ 0.59
CD4-212ENST00000544344 GOLIM4O00461 696 aa18.7■□□□□ 0.58
CD4-212ENST00000544344 VWA5AO00534 786 aa18.7■□□□□ 0.58
CD4-212ENST00000544344 AKR1A1P14550 325 aa18.7■□□□□ 0.58
CD4-212ENST00000544344 C12orf60Q5U649 245 aa18.7■□□□□ 0.58
CD4-212ENST00000544344 CCSAPQ6IQ19 270 aaPredicted RBP18.7■□□□□ 0.58
CD4-212ENST00000544344 RHPN1Q8TCX5 695 aa18.7■□□□□ 0.58
CD4-212ENST00000544344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.7■□□□□ 0.58
CD4-212ENST00000544344 SYMPKQ92797 1274 aaKnown RBP18.7■□□□□ 0.58
CD4-212ENST00000544344 TSEN34Q9BSV6 310 aaKnown RBP18.7■□□□□ 0.58
CD4-212ENST00000544344 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.69■□□□□ 0.58
CD4-212ENST00000544344 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.69■□□□□ 0.58
CD4-212ENST00000544344 CCER2I3L3R5 266 aa18.69■□□□□ 0.58
CD4-212ENST00000544344 EEF2P13639 858 aaKnown RBP18.69■□□□□ 0.58
CD4-212ENST00000544344 STAT3P40763 770 aa18.69■□□□□ 0.58
CD4-212ENST00000544344 CDK8P49336 464 aa18.69■□□□□ 0.58
CD4-212ENST00000544344 ACLYP53396 1101 aa18.69■□□□□ 0.58
CD4-212ENST00000544344 KCTD2Q14681 263 aa18.69■□□□□ 0.58
CD4-212ENST00000544344 FTSJ3Q8IY81 847 aaKnown RBP18.69■□□□□ 0.58
CD4-212ENST00000544344 KLHDC9Q8NEP7 349 aa18.69■□□□□ 0.58
CD4-212ENST00000544344 CCDC17Q96LX7 622 aa18.69■□□□□ 0.58
CD4-212ENST00000544344 DNAJC2Q99543 621 aaKnown RBP18.69■□□□□ 0.58
CD4-212ENST00000544344 TBX21Q9UL17 535 aa18.69■□□□□ 0.58
CD4-212ENST00000544344 PPP1R9AQ9ULJ8 1098 aa18.69■□□□□ 0.58
CD4-212ENST00000544344 SYNRGQ9UMZ2 1314 aa18.69■□□□□ 0.58
CD4-212ENST00000544344 GREB1LQ9C091 1923 aaPredicted RBP18.68■□□□□ 0.58
CD4-212ENST00000544344 CHGBP05060 677 aa18.68■□□□□ 0.58
CD4-212ENST00000544344 C16orf86Q6ZW13 317 aa18.68■□□□□ 0.58
CD4-212ENST00000544344 C16orf59Q7L2K0 433 aa18.68■□□□□ 0.58
CD4-212ENST00000544344 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.68■□□□□ 0.58
CD4-212ENST00000544344 ZNF576Q9H609 170 aa18.68■□□□□ 0.58
CD4-212ENST00000544344 ATP8A2Q9NTI2 1148 aa18.68■□□□□ 0.58
CD4-212ENST00000544344 MYADML2A6NDP7 307 aa18.67■□□□□ 0.58
CD4-212ENST00000544344 MBD4O95243 580 aa18.67■□□□□ 0.58
CD4-212ENST00000544344 SNAI1O95863 264 aaPredicted RBP18.67■□□□□ 0.58
CD4-212ENST00000544344 TIMP1P01033 207 aa18.67■□□□□ 0.58
CD4-212ENST00000544344 ADD2P35612 726 aa18.67■□□□□ 0.58
CD4-212ENST00000544344 IRX5P78411 483 aaPredicted RBP18.67■□□□□ 0.58
CD4-212ENST00000544344 TJAP1Q5JTD0 557 aa18.67■□□□□ 0.58
CD4-212ENST00000544344 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.67■□□□□ 0.58
CD4-212ENST00000544344 STARD7Q9NQZ5 370 aa18.67■□□□□ 0.58
CD4-212ENST00000544344 DNAJC25-GNG10A0A024R161 153 aa18.66■□□□□ 0.58
CD4-212ENST00000544344 USP17L12C9JPN9 530 aa18.66■□□□□ 0.58
CD4-212ENST00000544344 USP17L21D6R901 530 aa18.66■□□□□ 0.58
CD4-212ENST00000544344 ADCY6O43306 1168 aa18.66■□□□□ 0.58
CD4-212ENST00000544344 CDK7P50613 346 aa18.66■□□□□ 0.58
CD4-212ENST00000544344 KCNA10Q16322 511 aa18.66■□□□□ 0.58
CD4-212ENST00000544344 FAM83BQ5T0W9 1011 aa18.66■□□□□ 0.58
CD4-212ENST00000544344 RASIP1Q5U651 963 aa18.66■□□□□ 0.58
CD4-212ENST00000544344 MAMDC4Q6UXC1 1216 aa18.66■□□□□ 0.58
CD4-212ENST00000544344 TIFAQ96CG3 184 aa18.66■□□□□ 0.58
CD4-212ENST00000544344 KANSL2Q9H9L4 492 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms