RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 TNFRSF10AO00220 468 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 PQBP1O60828 265 aaKnown RBP11.54□□□□□ -0.56
C2CD3-220ENST00000544293 AKR1B1P15121 316 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 DNAJB2P25686 324 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 CDK7P50613 346 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 ADGRE1Q14246 886 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 NCAPG2Q86XI2 1143 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 SPICE1Q8N0Z3 855 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 MB21D1Q8N884 522 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 SDR42E1Q8WUS8 393 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 TOX2Q96NM4 488 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.54□□□□□ -0.56
C2CD3-220ENST00000544293 TINF2Q9BSI4 451 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 DCP1AQ9NPI6 582 aaPredicted RBP11.54□□□□□ -0.56
C2CD3-220ENST00000544293 XPNPEP3Q9NQH7 507 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 FBXO28Q9NVF7 368 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 NRBP1Q9UHY1 535 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 TBX21Q9UL17 535 aa11.54□□□□□ -0.56
C2CD3-220ENST00000544293 RLFQ13129 1914 aa11.53□□□□□ -0.56
C2CD3-220ENST00000544293 MYADML2A6NDP7 307 aa11.53□□□□□ -0.56
C2CD3-220ENST00000544293 ADCY6O43306 1168 aa11.53□□□□□ -0.56
C2CD3-220ENST00000544293 PRKAB2O43741 272 aa11.53□□□□□ -0.56
C2CD3-220ENST00000544293 SNAI1O95863 264 aaPredicted RBP11.53□□□□□ -0.56
C2CD3-220ENST00000544293 POLR3DP05423 398 aaPredicted RBP11.53□□□□□ -0.56
C2CD3-220ENST00000544293 RAG1P15918 1043 aa11.53□□□□□ -0.56
C2CD3-220ENST00000544293 TMEM240Q5SV17 173 aa11.53□□□□□ -0.56
C2CD3-220ENST00000544293 PBX4Q9BYU1 374 aa11.53□□□□□ -0.56
C2CD3-220ENST00000544293 TANGO6Q9C0B7 1094 aa11.53□□□□□ -0.56
C2CD3-220ENST00000544293 VCPKMTQ9H867 229 aa11.53□□□□□ -0.56
C2CD3-220ENST00000544293 TMEM39AQ9NV64 488 aa11.53□□□□□ -0.56
C2CD3-220ENST00000544293 MCM9Q9NXL9 1143 aa11.53□□□□□ -0.56
C2CD3-220ENST00000544293 DIS3Q9Y2L1 958 aaKnown RBP11.53□□□□□ -0.56
C2CD3-220ENST00000544293 MAGEB6P1A0A0J9YX57 407 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 IPO8O15397 1037 aaKnown RBP11.52□□□□□ -0.57
C2CD3-220ENST00000544293 FLOT1O75955 427 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 TIMP1P01033 207 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 CHGBP05060 677 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 RARBP10826 455 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 RLBP1P12271 317 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 FCER1AP12319 257 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 PDE6AP16499 860 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 ACLYP53396 1101 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 FPGSQ05932 587 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 MAP3K12Q12852 859 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 PLS1Q14651 629 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 CERS3Q8IU89 383 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 RIOX2Q8IUF8 465 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 LCORLQ8N3X6 602 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 FRAT1Q92837 279 aaPredicted RBP11.52□□□□□ -0.57
C2CD3-220ENST00000544293 TIFAQ96CG3 184 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 VWCEQ96DN2 955 aa11.52□□□□□ -0.57
C2CD3-220ENST00000544293 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.52□□□□□ -0.57
C2CD3-220ENST00000544293 ZNF214Q9UL59 606 aaPredicted RBP11.52□□□□□ -0.57
C2CD3-220ENST00000544293 CYP2D7A0A087X1C5 515 aa11.51□□□□□ -0.57
C2CD3-220ENST00000544293 VWA5AO00534 786 aa11.51□□□□□ -0.57
C2CD3-220ENST00000544293 MPHOSPH10O00566 681 aaKnown RBP11.51□□□□□ -0.57
C2CD3-220ENST00000544293 CTAGE5O15320 804 aa11.51□□□□□ -0.57
C2CD3-220ENST00000544293 OS9Q13438 667 aaPredicted RBP11.51□□□□□ -0.57
C2CD3-220ENST00000544293 KCNA10Q16322 511 aa11.51□□□□□ -0.57
C2CD3-220ENST00000544293 TMEM179Q6ZVK1 233 aa11.51□□□□□ -0.57
C2CD3-220ENST00000544293 RNF180Q86T96 592 aa11.51□□□□□ -0.57
C2CD3-220ENST00000544293 MMP19Q99542 508 aa11.51□□□□□ -0.57
C2CD3-220ENST00000544293 TSEN34Q9BSV6 310 aaKnown RBP11.51□□□□□ -0.57
C2CD3-220ENST00000544293 SLC5A4Q9NY91 659 aa11.51□□□□□ -0.57
C2CD3-220ENST00000544293 RIPK3Q9Y572 518 aa11.51□□□□□ -0.57
C2CD3-220ENST00000544293 ROBO3Q96MS0 1386 aa11.51□□□□□ -0.57
C2CD3-220ENST00000544293 DNAJC25-GNG10A0A024R161 153 aa11.5□□□□□ -0.57
C2CD3-220ENST00000544293 SLC25A27O95847 323 aa11.5□□□□□ -0.57
C2CD3-220ENST00000544293 ACRP10323 421 aa11.5□□□□□ -0.57
C2CD3-220ENST00000544293 STAT3P40763 770 aa11.5□□□□□ -0.57
C2CD3-220ENST00000544293 SLC9C2Q5TAH2 1124 aa11.5□□□□□ -0.57
C2CD3-220ENST00000544293 MFSD5Q6N075 450 aa11.5□□□□□ -0.57
C2CD3-220ENST00000544293 TMED8Q6PL24 325 aaPredicted RBP11.5□□□□□ -0.57
C2CD3-220ENST00000544293 PPM1EQ8WY54 764 aa11.5□□□□□ -0.57
C2CD3-220ENST00000544293 FGD4Q96M96 766 aa11.5□□□□□ -0.57
C2CD3-220ENST00000544293 ASB2Q96Q27 587 aa11.5□□□□□ -0.57
C2CD3-220ENST00000544293 PRDM12Q9H4Q4 367 aa11.5□□□□□ -0.57
C2CD3-220ENST00000544293 ZNF532Q9HCE3 1301 aa11.5□□□□□ -0.57
C2CD3-220ENST00000544293 SYNRGQ9UMZ2 1314 aa11.5□□□□□ -0.57
C2CD3-220ENST00000544293 FRMPD3Q5JV73 1810 aa11.49□□□□□ -0.57
C2CD3-220ENST00000544293 WDR46O15213 610 aaKnown RBP11.49□□□□□ -0.57
C2CD3-220ENST00000544293 EEF2P13639 858 aaKnown RBP11.49□□□□□ -0.57
C2CD3-220ENST00000544293 AKR1A1P14550 325 aa11.49□□□□□ -0.57
C2CD3-220ENST00000544293 CSF2RAP15509 400 aa11.49□□□□□ -0.57
C2CD3-220ENST00000544293 CDK8P49336 464 aa11.49□□□□□ -0.57
C2CD3-220ENST00000544293 ICA1Q05084 483 aa11.49□□□□□ -0.57
C2CD3-220ENST00000544293 AKNAD1Q5T1N1 836 aa11.49□□□□□ -0.57
C2CD3-220ENST00000544293 C12orf60Q5U649 245 aa11.49□□□□□ -0.57
C2CD3-220ENST00000544293 CEP85Q6P2H3 762 aa11.49□□□□□ -0.57
C2CD3-220ENST00000544293 MAMDC4Q6UXC1 1216 aa11.49□□□□□ -0.57
C2CD3-220ENST00000544293 ZNF365Q70YC5 407 aa11.49□□□□□ -0.57
C2CD3-220ENST00000544293 ATXN2LQ8WWM7 1075 aaKnown RBP11.49□□□□□ -0.57
C2CD3-220ENST00000544293 ARMT1Q9H993 441 aa11.49□□□□□ -0.57
C2CD3-220ENST00000544293 STARD7Q9NQZ5 370 aa11.49□□□□□ -0.57
C2CD3-220ENST00000544293 CXXC1Q9P0U4 656 aaPredicted RBP11.49□□□□□ -0.57
C2CD3-220ENST00000544293 PPP1R9AQ9ULJ8 1098 aa11.49□□□□□ -0.57
C2CD3-220ENST00000544293 AACSQ86V21 672 aa11.48□□□□□ -0.57
C2CD3-220ENST00000544293 CRNKL1Q9BZJ0 848 aaKnown RBP11.48□□□□□ -0.57
C2CD3-220ENST00000544293 KATNBL1Q9H079 304 aa11.48□□□□□ -0.57
C2CD3-220ENST00000544293 IL1RAPL2Q9NP60 686 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms