RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 SAMD1Q6SPF0 538 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 CATIPQ7Z7H3 387 aa16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 ZCCHC17Q9NP64 241 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 PDRG1Q9NUG6 133 aa16.95■□□□□ 0.3
TNFRSF1A-216ENST00000543995 PDHBP11177 359 aa16.94■□□□□ 0.3
TNFRSF1A-216ENST00000543995 BMP3P12645 472 aa16.94■□□□□ 0.3
TNFRSF1A-216ENST00000543995 RASGRP2Q7LDG7 609 aa16.94■□□□□ 0.3
TNFRSF1A-216ENST00000543995 DCAF4Q8WV16 495 aa16.94■□□□□ 0.3
TNFRSF1A-216ENST00000543995 IL17RAQ96F46 866 aa16.94■□□□□ 0.3
TNFRSF1A-216ENST00000543995 GMCL1Q96IK5 515 aa16.94■□□□□ 0.3
TNFRSF1A-216ENST00000543995 TBC1D32Q96NH3 1257 aa16.94■□□□□ 0.3
TNFRSF1A-216ENST00000543995 PARK7Q99497 189 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1A-216ENST00000543995 FRMPD2Q68DX3 1309 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1A-216ENST00000543995 FLOT1O75955 427 aa16.93■□□□□ 0.3
TNFRSF1A-216ENST00000543995 CYP2C8P10632 490 aa16.93■□□□□ 0.3
TNFRSF1A-216ENST00000543995 IKQ13123 557 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1A-216ENST00000543995 SYNE3Q6ZMZ3 975 aa16.93■□□□□ 0.3
TNFRSF1A-216ENST00000543995 CATSPERGQ6ZRH7 1159 aa16.93■□□□□ 0.3
TNFRSF1A-216ENST00000543995 KCTD1Q719H9 257 aa16.93■□□□□ 0.3
TNFRSF1A-216ENST00000543995 ZNF654Q8IZM8 581 aa16.93■□□□□ 0.3
TNFRSF1A-216ENST00000543995 SMCR8Q8TEV9 937 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1A-216ENST00000543995 NUP133Q8WUM0 1156 aa16.93■□□□□ 0.3
TNFRSF1A-216ENST00000543995 BRF1Q92994 677 aa16.93■□□□□ 0.3
TNFRSF1A-216ENST00000543995 ASCC2Q9H1I8 757 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1A-216ENST00000543995 RNF186Q9NXI6 227 aa16.93■□□□□ 0.3
TNFRSF1A-216ENST00000543995 NAP1L2Q9ULW6 460 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1A-216ENST00000543995 SLC12A7Q9Y666 1083 aa16.93■□□□□ 0.3
TNFRSF1A-216ENST00000543995 TRPA1O75762 1119 aa16.92■□□□□ 0.3
TNFRSF1A-216ENST00000543995 NEK4P51957 841 aa16.92■□□□□ 0.3
TNFRSF1A-216ENST00000543995 SGMS1Q86VZ5 419 aa16.92■□□□□ 0.3
TNFRSF1A-216ENST00000543995 ZFYVE28Q9HCC9 887 aa16.92■□□□□ 0.3
TNFRSF1A-216ENST00000543995 GPCPD1Q9NPB8 672 aa16.92■□□□□ 0.3
TNFRSF1A-216ENST00000543995 TMEM232C9JQI7 657 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 CA12O43570 354 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 PARP1P09874 1014 aaKnown RBP16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 STAT2P52630 851 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 COG2Q14746 738 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 KIF2CQ99661 725 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 MYL10Q9BUA6 226 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 FEM1BQ9UK73 627 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 PARP14Q460N5 1801 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 KLF18A0A0U1RQI7 1052 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 DDAH1O94760 285 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 GOLGA8HP0CJ92 632 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 CALM1P0DP23 149 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 CALM2P0DP24 149 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 CALM3P0DP25 149 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 SNHG28P0DPA3 235 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 APOBRQ0VD83 1088 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 CRHR2Q13324 411 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 ASPRV1Q53RT3 343 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 GPATCH4Q5T3I0 446 aaKnown RBP16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 RAB11FIP4Q86YS3 637 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 FBXL16Q8N461 479 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 JMYQ8N9B5 988 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 P2RX7Q99572 595 aaKnown RBP16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 SLF1Q9BQI6 1058 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 FBXO28Q9NVF7 368 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 HOXC10Q9NYD6 342 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 BRPF3Q9ULD4 1205 aa16.91■□□□□ 0.3
TNFRSF1A-216ENST00000543995 TBC1D8O95759 1140 aa16.9■□□□□ 0.3
TNFRSF1A-216ENST00000543995 RXRAP19793 462 aa16.9■□□□□ 0.3
TNFRSF1A-216ENST00000543995 HERVK_113P62684 666 aa16.9■□□□□ 0.3
TNFRSF1A-216ENST00000543995 ZNF543Q08ER8 600 aa16.9■□□□□ 0.3
TNFRSF1A-216ENST00000543995 TROAPQ12815 778 aa16.9■□□□□ 0.3
TNFRSF1A-216ENST00000543995 TOB2Q14106 344 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1A-216ENST00000543995 APOA5Q6Q788 366 aa16.9■□□□□ 0.3
TNFRSF1A-216ENST00000543995 MICU3Q86XE3 530 aa16.9■□□□□ 0.3
TNFRSF1A-216ENST00000543995 CCDC144CPQ8IYA2 1237 aa16.9■□□□□ 0.3
TNFRSF1A-216ENST00000543995 CTCFLQ8NI51 663 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1A-216ENST00000543995 CHURC1Q8WUH1 139 aa16.9■□□□□ 0.3
TNFRSF1A-216ENST00000543995 KIFC2Q96AC6 838 aa16.9■□□□□ 0.3
TNFRSF1A-216ENST00000543995 WBP1LQ9NX94 342 aa16.9■□□□□ 0.3
TNFRSF1A-216ENST00000543995 SAGE1Q9NXZ1 904 aa16.9■□□□□ 0.3
TNFRSF1A-216ENST00000543995 DSG3P32926 999 aa16.89■□□□□ 0.29
TNFRSF1A-216ENST00000543995 AK2P54819 239 aa16.89■□□□□ 0.29
TNFRSF1A-216ENST00000543995 GRM4Q14833 912 aa16.89■□□□□ 0.29
TNFRSF1A-216ENST00000543995 RABEP1Q15276 862 aa16.89■□□□□ 0.29
TNFRSF1A-216ENST00000543995 ANKRD1Q15327 319 aa16.89■□□□□ 0.29
TNFRSF1A-216ENST00000543995 TTBK2Q6IQ55 1244 aa16.89■□□□□ 0.29
TNFRSF1A-216ENST00000543995 FAM160B2Q86V87 743 aa16.89■□□□□ 0.29
TNFRSF1A-216ENST00000543995 LARP6Q9BRS8 491 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1A-216ENST00000543995 AGXT2Q9BYV1 514 aa16.89■□□□□ 0.29
TNFRSF1A-216ENST00000543995 RLFQ13129 1914 aa16.88■□□□□ 0.29
TNFRSF1A-216ENST00000543995 SPDYE16A6NNV3 312 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-216ENST00000543995 GOLGA8BA8MQT2 603 aa16.88■□□□□ 0.29
TNFRSF1A-216ENST00000543995 ZBTB43O43298 467 aa16.88■□□□□ 0.29
TNFRSF1A-216ENST00000543995 TLR2O60603 784 aa16.88■□□□□ 0.29
TNFRSF1A-216ENST00000543995 KIF5BP33176 963 aa16.88■□□□□ 0.29
TNFRSF1A-216ENST00000543995 SLC16A2P36021 539 aa16.88■□□□□ 0.29
TNFRSF1A-216ENST00000543995 NOL8Q76FK4 1167 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-216ENST00000543995 PRPF38AQ8NAV1 312 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-216ENST00000543995 GTF3C2Q8WUA4 911 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-216ENST00000543995 MAD2L2Q9UI95 211 aa16.88■□□□□ 0.29
TNFRSF1A-216ENST00000543995 PPP1R9AQ9ULJ8 1098 aa16.88■□□□□ 0.29
TNFRSF1A-216ENST00000543995 CTDP1Q9Y5B0 961 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-216ENST00000543995 KLRF2D3W0D1 207 aa16.87■□□□□ 0.29
TNFRSF1A-216ENST00000543995 DHX16O60231 1041 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1A-216ENST00000543995 GCLCP48506 637 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1A-216ENST00000543995 STAG2Q8N3U4 1231 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms