RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 KLRF2D3W0D1 207 aa16.21■□□□□ 0.19
LDB3-207ENST00000542786 AKR1B1P15121 316 aa16.21■□□□□ 0.19
LDB3-207ENST00000542786 BMP6P22004 513 aa16.21■□□□□ 0.19
LDB3-207ENST00000542786 CRKP46108 304 aa16.21■□□□□ 0.19
LDB3-207ENST00000542786 ZNF174Q15697 407 aa16.21■□□□□ 0.19
LDB3-207ENST00000542786 C4orf32Q8N8J7 132 aa16.21■□□□□ 0.19
LDB3-207ENST00000542786 SPC24Q8NBT2 197 aa16.21■□□□□ 0.19
LDB3-207ENST00000542786 CNNM3Q8NE01 707 aa16.21■□□□□ 0.19
LDB3-207ENST00000542786 CNKSR1Q969H4 720 aa16.21■□□□□ 0.19
LDB3-207ENST00000542786 HSD3B7Q9H2F3 369 aa16.21■□□□□ 0.19
LDB3-207ENST00000542786 ECE2O60344 883 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 TPM3P06753 285 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 GOLGA8HP0CJ92 632 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 SNHG28P0DPA3 235 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 SARSP49591 514 aaKnown RBP16.2■□□□□ 0.18
LDB3-207ENST00000542786 HDLBPQ00341 1268 aaKnown RBP16.2■□□□□ 0.18
LDB3-207ENST00000542786 NFIAQ12857 509 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 IL17AQ16552 155 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 PIK3AP1Q6ZUJ8 805 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 TMX4Q9H1E5 349 aaPredicted RBP16.2■□□□□ 0.18
LDB3-207ENST00000542786 SERTAD1Q9UHV2 236 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 PCDHA5Q9Y5H7 936 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 POLR2DO15514 142 aaKnown RBP16.2■□□□□ 0.18
LDB3-207ENST00000542786 PRR29P0C7W0 189 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 GALNT17Q6IS24 598 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 USP17L2Q6R6M4 530 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 SH3RF1Q7Z6J0 888 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 SPATA20Q8TB22 786 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 EHD4Q9H223 541 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 CPVLQ9H3G5 476 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 STK32BQ9NY57 414 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 SWAP70Q9UH65 585 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 PCDHAC2Q9Y5I4 1007 aa16.2■□□□□ 0.18
LDB3-207ENST00000542786 BECN2A8MW95 431 aa16.19■□□□□ 0.18
LDB3-207ENST00000542786 IKBKBO14920 756 aa16.19■□□□□ 0.18
LDB3-207ENST00000542786 PARP1P09874 1014 aaKnown RBP16.19■□□□□ 0.18
LDB3-207ENST00000542786 PDHBP11177 359 aa16.19■□□□□ 0.18
LDB3-207ENST00000542786 PTGS1P23219 599 aa16.19■□□□□ 0.18
LDB3-207ENST00000542786 PTGDRQ13258 359 aa16.19■□□□□ 0.18
LDB3-207ENST00000542786 ZFPM1Q8IX07 1006 aa16.19■□□□□ 0.18
LDB3-207ENST00000542786 EPSTI1Q96J88 318 aa16.19■□□□□ 0.18
LDB3-207ENST00000542786 NRBP1Q9UHY1 535 aa16.19■□□□□ 0.18
LDB3-207ENST00000542786 SERPINB13Q9UIV8 391 aa16.19■□□□□ 0.18
LDB3-207ENST00000542786 MYH8P13535 1937 aa16.19■□□□□ 0.18
LDB3-207ENST00000542786 USP17L5A8MUK1 530 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 KIAA2012Q0VF49 1180 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 POSTNQ15063 836 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 CCDC144BQ3MJ40 725 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 CCDC148Q8NFR7 591 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 SYMPKQ92797 1274 aaKnown RBP16.18■□□□□ 0.18
LDB3-207ENST00000542786 RIOX1Q9H6W3 641 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 DNAJC18Q9H819 358 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 SPTLC3Q9NUV7 552 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 MAN1B1Q9UKM7 699 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 PYCARDQ9ULZ3 195 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 PCDHA6Q9UN73 950 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 PCDHA8Q9Y5H6 950 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 GOLGA6L6A8MZA4 724 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 NPM3O75607 178 aaKnown RBP16.18■□□□□ 0.18
LDB3-207ENST00000542786 RASGRP4Q8TDF6 673 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 IDI2Q9BXS1 227 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 PDGFDQ9GZP0 370 aaPredicted RBP16.18■□□□□ 0.18
LDB3-207ENST00000542786 ZMYND12Q9H0C1 365 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 FAM198AQ9UFP1 575 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 PSME4Q14997 1843 aa16.18■□□□□ 0.18
LDB3-207ENST00000542786 G3V3G9 751 aa16.17■□□□□ 0.18
LDB3-207ENST00000542786 E2F4Q16254 413 aa16.17■□□□□ 0.18
LDB3-207ENST00000542786 DCAF8Q5TAQ9 597 aa16.17■□□□□ 0.18
LDB3-207ENST00000542786 CC2D2BQ6DHV5 1058 aa16.17■□□□□ 0.18
LDB3-207ENST00000542786 CCDC186Q7Z3E2 898 aa16.17■□□□□ 0.18
LDB3-207ENST00000542786 HEATR3Q7Z4Q2 680 aa16.17■□□□□ 0.18
LDB3-207ENST00000542786 CLEC10AQ8IUN9 316 aa16.17■□□□□ 0.18
LDB3-207ENST00000542786 KIAA1524Q8TCG1 905 aa16.17■□□□□ 0.18
LDB3-207ENST00000542786 MTMR7Q9Y216 660 aa16.17■□□□□ 0.18
LDB3-207ENST00000542786 MORC3Q14149 939 aa16.16■□□□□ 0.18
LDB3-207ENST00000542786 ZRSR1Q15695 479 aaKnown RBP16.16■□□□□ 0.18
LDB3-207ENST00000542786 AOC3Q16853 763 aa16.16■□□□□ 0.18
LDB3-207ENST00000542786 ARL6IP4Q66PJ3 421 aaKnown RBP16.16■□□□□ 0.18
LDB3-207ENST00000542786 ISM2Q6H9L7 571 aa16.16■□□□□ 0.18
LDB3-207ENST00000542786 SH3BP5LQ7L8J4 393 aa16.16■□□□□ 0.18
LDB3-207ENST00000542786 KIAA0825Q8IV33 1275 aa16.16■□□□□ 0.18
LDB3-207ENST00000542786 GRAMD1CQ8IYS0 662 aa16.16■□□□□ 0.18
LDB3-207ENST00000542786 CLIP2Q9UDT6 1046 aa16.16■□□□□ 0.18
LDB3-207ENST00000542786 SLFN14P0C7P3 912 aa16.16■□□□□ 0.18
LDB3-207ENST00000542786 SLURP2P0DP57 97 aa16.16■□□□□ 0.18
LDB3-207ENST00000542786 MCM7P33993 719 aa16.16■□□□□ 0.18
LDB3-207ENST00000542786 KANK3Q6NY19 840 aa16.16■□□□□ 0.18
LDB3-207ENST00000542786 LRRC47Q8N1G4 583 aaKnown RBP16.16■□□□□ 0.18
LDB3-207ENST00000542786 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
LDB3-207ENST00000542786 SERPINA10Q9UK55 444 aa16.16■□□□□ 0.18
LDB3-207ENST00000542786 ESYT2A0FGR8 921 aa16.15■□□□□ 0.18
LDB3-207ENST00000542786 YDJCA8MPS7 323 aa16.15■□□□□ 0.18
LDB3-207ENST00000542786 ASPRV1Q53RT3 343 aa16.15■□□□□ 0.18
LDB3-207ENST00000542786 C17orf53Q8N3J3 647 aaPredicted RBP16.15■□□□□ 0.18
LDB3-207ENST00000542786 PDILTQ8N807 584 aa16.15■□□□□ 0.18
LDB3-207ENST00000542786 RRP36Q96EU6 259 aaKnown RBP16.15■□□□□ 0.18
LDB3-207ENST00000542786 PIGSQ96S52 555 aa16.15■□□□□ 0.18
LDB3-207ENST00000542786 HOOK1Q9UJC3 728 aaKnown RBP16.15■□□□□ 0.18
LDB3-207ENST00000542786 COL4A5P29400 1685 aa16.14■□□□□ 0.17
LDB3-207ENST00000542786 VWA3AA6NCI4 1184 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms