RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 PATL2C9JE40 543 aaKnown RBP18.67■□□□□ 0.58
VPS33A-206ENST00000542310 SLC25A27O95847 323 aa18.67■□□□□ 0.58
VPS33A-206ENST00000542310 ADORA2AP29274 412 aa18.67■□□□□ 0.58
VPS33A-206ENST00000542310 COPB2P35606 906 aa18.67■□□□□ 0.58
VPS33A-206ENST00000542310 ATP2B2Q01814 1243 aa18.67■□□□□ 0.58
VPS33A-206ENST00000542310 ZMYM1Q5SVZ6 1142 aa18.67■□□□□ 0.58
VPS33A-206ENST00000542310 LHX8Q68G74 356 aa18.67■□□□□ 0.58
VPS33A-206ENST00000542310 NPLOC4Q8TAT6 608 aa18.67■□□□□ 0.58
VPS33A-206ENST00000542310 OTUD7AQ8TE49 926 aaPredicted RBP18.67■□□□□ 0.58
VPS33A-206ENST00000542310 CRBNQ96SW2 442 aa18.67■□□□□ 0.58
VPS33A-206ENST00000542310 SLC5A4Q9NY91 659 aa18.67■□□□□ 0.58
VPS33A-206ENST00000542310 PPP1R9AQ9ULJ8 1098 aa18.67■□□□□ 0.58
VPS33A-206ENST00000542310 IGKV6D-41A0A0C4DH26 115 aa18.66■□□□□ 0.58
VPS33A-206ENST00000542310 A0A1W2PPC1 479 aa18.66■□□□□ 0.58
VPS33A-206ENST00000542310 MINDY4BA8MYZ0 360 aa18.66■□□□□ 0.58
VPS33A-206ENST00000542310 COL6A1P12109 1028 aa18.65■□□□□ 0.58
VPS33A-206ENST00000542310 CYBAP13498 195 aa18.65■□□□□ 0.58
VPS33A-206ENST00000542310 PLS1Q14651 629 aa18.65■□□□□ 0.58
VPS33A-206ENST00000542310 TMEM132BQ14DG7 1078 aa18.65■□□□□ 0.58
VPS33A-206ENST00000542310 DPP9Q86TI2 863 aa18.65■□□□□ 0.58
VPS33A-206ENST00000542310 TICAM2Q86XR7 235 aa18.65■□□□□ 0.58
VPS33A-206ENST00000542310 IFNL3Q8IZI9 196 aa18.65■□□□□ 0.58
VPS33A-206ENST00000542310 RBM27Q9P2N5 1060 aaKnown RBP18.65■□□□□ 0.58
VPS33A-206ENST00000542310 DDX20Q9UHI6 824 aaKnown RBP18.65■□□□□ 0.58
VPS33A-206ENST00000542310 PFASO15067 1338 aa18.65■□□□□ 0.58
VPS33A-206ENST00000542310 VWA5AO00534 786 aa18.64■□□□□ 0.57
VPS33A-206ENST00000542310 APPP05067 770 aa18.64■□□□□ 0.57
VPS33A-206ENST00000542310 FAM83BQ5T0W9 1011 aa18.64■□□□□ 0.57
VPS33A-206ENST00000542310 NCAPG2Q86XI2 1143 aa18.64■□□□□ 0.57
VPS33A-206ENST00000542310 RIOX2Q8IUF8 465 aa18.64■□□□□ 0.57
VPS33A-206ENST00000542310 STAP2Q9UGK3 403 aa18.64■□□□□ 0.57
VPS33A-206ENST00000542310 SLC3A2P08195 630 aaKnown RBP18.63■□□□□ 0.57
VPS33A-206ENST00000542310 FCER1AP12319 257 aa18.63■□□□□ 0.57
VPS33A-206ENST00000542310 PDE4BQ07343 736 aa18.63■□□□□ 0.57
VPS33A-206ENST00000542310 ANKRD45Q5TZF3 282 aa18.63■□□□□ 0.57
VPS33A-206ENST00000542310 ZNF444Q8N0Y2 327 aaPredicted RBP18.63■□□□□ 0.57
VPS33A-206ENST00000542310 REPS2Q8NFH8 660 aa18.63■□□□□ 0.57
VPS33A-206ENST00000542310 SLF1Q9BQI6 1058 aa18.63■□□□□ 0.57
VPS33A-206ENST00000542310 NAPBQ9H115 298 aa18.63■□□□□ 0.57
VPS33A-206ENST00000542310 FBXO28Q9NVF7 368 aa18.63■□□□□ 0.57
VPS33A-206ENST00000542310 ZNF214Q9UL59 606 aaPredicted RBP18.63■□□□□ 0.57
VPS33A-206ENST00000542310 NDUFB10O96000 172 aa18.62■□□□□ 0.57
VPS33A-206ENST00000542310 CYP2C19P33261 490 aa18.62■□□□□ 0.57
VPS33A-206ENST00000542310 PPP4R3BQ5MIZ7 849 aa18.62■□□□□ 0.57
VPS33A-206ENST00000542310 C7orf61Q8IZ16 206 aa18.62■□□□□ 0.57
VPS33A-206ENST00000542310 MKL1Q969V6 931 aa18.62■□□□□ 0.57
VPS33A-206ENST00000542310 EVI5LQ96CN4 794 aa18.62■□□□□ 0.57
VPS33A-206ENST00000542310 SEC62Q99442 399 aaKnown RBP18.62■□□□□ 0.57
VPS33A-206ENST00000542310 F5H6K3 240 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 RAD21O60216 631 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 COBLO75128 1261 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 TTLL1O95922 423 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 STAT3P40763 770 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 KLRC3Q07444 240 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 PPARAQ07869 468 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 GMCL1P1Q8NEA9 526 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 TRPV1Q8NER1 839 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 NEDD1Q8NHV4 660 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 CEP95Q96GE4 821 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 MAML3Q96JK9 1138 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 MMP19Q99542 508 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 MTMR4Q9NYA4 1195 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 NRBP1Q9UHY1 535 aa18.61■□□□□ 0.57
VPS33A-206ENST00000542310 DIS3Q9Y2L1 958 aaKnown RBP18.61■□□□□ 0.57
VPS33A-206ENST00000542310 DNM1LO00429 736 aa18.6■□□□□ 0.57
VPS33A-206ENST00000542310 ATP2A1O14983 1001 aa18.6■□□□□ 0.57
VPS33A-206ENST00000542310 SEPT4O43236 478 aa18.6■□□□□ 0.57
VPS33A-206ENST00000542310 PDE1AP54750 535 aa18.6■□□□□ 0.57
VPS33A-206ENST00000542310 SAMD1Q6SPF0 538 aaPredicted RBP18.6■□□□□ 0.57
VPS33A-206ENST00000542310 STK11IPQ8N1F8 1099 aa18.6■□□□□ 0.57
VPS33A-206ENST00000542310 TEX13BQ9BXU2 312 aa18.6■□□□□ 0.57
VPS33A-206ENST00000542310 FOXP2O15409 715 aa18.59■□□□□ 0.57
VPS33A-206ENST00000542310 PRDM1O75626 825 aa18.59■□□□□ 0.57
VPS33A-206ENST00000542310 TSPY3P0CV98 308 aa18.59■□□□□ 0.57
VPS33A-206ENST00000542310 TSPY8P0CW00 308 aa18.59■□□□□ 0.57
VPS33A-206ENST00000542310 CNGA1P29973 690 aa18.59■□□□□ 0.57
VPS33A-206ENST00000542310 BMP8BP34820 402 aa18.59■□□□□ 0.57
VPS33A-206ENST00000542310 KCTD2Q14681 263 aa18.59■□□□□ 0.57
VPS33A-206ENST00000542310 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.59■□□□□ 0.57
VPS33A-206ENST00000542310 PRPF38AQ8NAV1 312 aaKnown RBP18.59■□□□□ 0.57
VPS33A-206ENST00000542310 HELLSQ9NRZ9 838 aa18.59■□□□□ 0.57
VPS33A-206ENST00000542310 CLIP2Q9UDT6 1046 aa18.59■□□□□ 0.57
VPS33A-206ENST00000542310 LAMA4Q16363 1823 aa18.58■□□□□ 0.57
VPS33A-206ENST00000542310 ZMYM6O95789 1325 aa18.58■□□□□ 0.57
VPS33A-206ENST00000542310 NUP88Q99567 741 aaPredicted RBP18.58■□□□□ 0.56
VPS33A-206ENST00000542310 GDF15Q99988 308 aa18.58■□□□□ 0.56
VPS33A-206ENST00000542310 FEM1BQ9UK73 627 aa18.58■□□□□ 0.56
VPS33A-206ENST00000542310 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.58■□□□□ 0.56
VPS33A-206ENST00000542310 FDX1P10109 184 aa18.57■□□□□ 0.56
VPS33A-206ENST00000542310 OAZ1P54368 228 aa18.57■□□□□ 0.56
VPS33A-206ENST00000542310 ZNF792Q3KQV3 632 aa18.57■□□□□ 0.56
VPS33A-206ENST00000542310 SMC5Q8IY18 1101 aa18.57■□□□□ 0.56
VPS33A-206ENST00000542310 MSL3Q8N5Y2 521 aaKnown RBP18.57■□□□□ 0.56
VPS33A-206ENST00000542310 ANAPC4Q9UJX5 808 aa18.57■□□□□ 0.56
VPS33A-206ENST00000542310 SZT2Q5T011 3432 aa18.57■□□□□ 0.56
VPS33A-206ENST00000542310 LAMA3Q16787 3333 aa18.57■□□□□ 0.56
VPS33A-206ENST00000542310 LTBP2Q14767 1821 aa18.56■□□□□ 0.56
VPS33A-206ENST00000542310 SMCHD1A6NHR9 2005 aa18.56■□□□□ 0.56
VPS33A-206ENST00000542310 ALX1Q15699 326 aa18.56■□□□□ 0.56
VPS33A-206ENST00000542310 LRRC26Q2I0M4 334 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms