RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 MTMR7Q9Y216 660 aa12.35□□□□□ -0.43
NECAP1-206ENST00000542095 ADAMTSL1Q8N6G6 1762 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 PARP1P09874 1014 aaKnown RBP12.34□□□□□ -0.43
NECAP1-206ENST00000542095 LMOD1P29536 600 aaPredicted RBP12.34□□□□□ -0.43
NECAP1-206ENST00000542095 FILIP1Q7Z7B0 1213 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 MLKLQ8NB16 471 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 DAGLBQ8NCG7 672 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 DHX58Q96C10 678 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 EPSTI1Q96J88 318 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 PYM1Q9BRP8 204 aaKnown RBP12.34□□□□□ -0.43
NECAP1-206ENST00000542095 TTF2Q9UNY4 1162 aaKnown RBP12.34□□□□□ -0.43
NECAP1-206ENST00000542095 PLIN4Q96Q06 1357 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 VWA3AA6NCI4 1184 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 KLRF2D3W0D1 207 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 F8W031 263 aaPredicted RBP12.34□□□□□ -0.43
NECAP1-206ENST00000542095 CYTH3O43739 400 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 SLFN14P0C7P3 912 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 KCNA4P22459 653 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 MCM7P33993 719 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 FANCCQ00597 558 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 PICALMQ13492 652 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 DHX8Q14562 1220 aaKnown RBP12.34□□□□□ -0.43
NECAP1-206ENST00000542095 WWC2Q6AWC2 1192 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 HEATR3Q7Z4Q2 680 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 CERS5Q8N5B7 392 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 CEP95Q96GE4 821 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 OSBPL5Q9H0X9 879 aaPredicted RBP12.34□□□□□ -0.43
NECAP1-206ENST00000542095 BARHL2Q9NY43 387 aa12.34□□□□□ -0.43
NECAP1-206ENST00000542095 CCDC194A0A1B0GVG4 234 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 STXBP3O00186 592 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 CBFA2T2O43439 604 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 SMARCA1P28370 1054 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 NOVP48745 357 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 MORC3Q14149 939 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 DOK7Q18PE1 504 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 ARL6IP4Q66PJ3 421 aaKnown RBP12.33□□□□□ -0.44
NECAP1-206ENST00000542095 CCDC12Q8WUD4 166 aaPredicted RBP12.33□□□□□ -0.44
NECAP1-206ENST00000542095 M0R2N6 131 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 GOLGA8HP0CJ92 632 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 BMP6P22004 513 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 SLC35G1Q2M3R5 365 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 GRAMD1CQ8IYS0 662 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 SPATA20Q8TB22 786 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 ZNF622Q969S3 477 aaKnown RBP eCLIP12.33□□□□□ -0.44
NECAP1-206ENST00000542095 PRIMPOLQ96LW4 560 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 HSD3B7Q9H2F3 369 aa12.33□□□□□ -0.44
NECAP1-206ENST00000542095 MYH4Q9Y623 1939 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 A0A087X0B3 334 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 ADAMTS3O15072 1205 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 GABPAQ06546 454 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 TYW1BQ6NUM6 668 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 HHIPL2Q6UWX4 724 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 SH3RF1Q7Z6J0 888 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 USP40Q9NVE5 1235 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 SWAP70Q9UH65 585 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 PCDHA6Q9UN73 950 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 PCDHA8Q9Y5H6 950 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 UQCRHLA0A096LP55 91 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 SERPINC1P01008 464 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 UQCRHP07919 91 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 CT47A1Q5JQC4 288 aaPredicted RBP12.32□□□□□ -0.44
NECAP1-206ENST00000542095 TMC6Q7Z403 805 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 TEKT1Q969V4 418 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 RRP36Q96EU6 259 aaKnown RBP12.32□□□□□ -0.44
NECAP1-206ENST00000542095 PAGE5Q96GU1 130 aa12.32□□□□□ -0.44
NECAP1-206ENST00000542095 SEC63Q9UGP8 760 aaKnown RBP12.32□□□□□ -0.44
NECAP1-206ENST00000542095 SLX4Q8IY92 1834 aa12.31□□□□□ -0.44
NECAP1-206ENST00000542095 MYO3BQ8WXR4 1341 aa12.31□□□□□ -0.44
NECAP1-206ENST00000542095 ATP1A3P13637 1013 aa12.31□□□□□ -0.44
NECAP1-206ENST00000542095 LONP1P36776 959 aaKnown RBP12.31□□□□□ -0.44
NECAP1-206ENST00000542095 UBASH3AP57075 661 aa12.31□□□□□ -0.44
NECAP1-206ENST00000542095 MSL1Q68DK7 614 aa12.31□□□□□ -0.44
NECAP1-206ENST00000542095 USP17L2Q6R6M4 530 aa12.31□□□□□ -0.44
NECAP1-206ENST00000542095 PODNQ7Z5L7 613 aa12.31□□□□□ -0.44
NECAP1-206ENST00000542095 C2CD5Q86YS7 1000 aa12.31□□□□□ -0.44
NECAP1-206ENST00000542095 IQUBQ8NA54 791 aa12.31□□□□□ -0.44
NECAP1-206ENST00000542095 CCDC150Q8NCX0 1101 aa12.31□□□□□ -0.44
NECAP1-206ENST00000542095 RASGRP4Q8TDF6 673 aa12.31□□□□□ -0.44
NECAP1-206ENST00000542095 GREB1LQ9C091 1923 aaPredicted RBP12.31□□□□□ -0.44
NECAP1-206ENST00000542095 SKILP12757 684 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 TXLNAP40222 546 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 AFMP43652 599 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 SCNN1DP51172 638 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 NAPAP54920 295 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 ARID5BQ14865 1188 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 STYK1Q6J9G0 422 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 ENOX1Q8TC92 643 aaKnown RBP12.3□□□□□ -0.44
NECAP1-206ENST00000542095 MXD3Q9BW11 206 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 ZMYND12Q9H0C1 365 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 DDX4Q9NQI0 724 aaKnown RBP12.3□□□□□ -0.44
NECAP1-206ENST00000542095 FANCLQ9NW38 375 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 MTMR4Q9NYA4 1195 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 SERPINB13Q9UIV8 391 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 ZNF646O15015 1829 aaPredicted RBP12.3□□□□□ -0.44
NECAP1-206ENST00000542095 C10orf71Q711Q0 1435 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 H0YIN7 160 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 HLA-DOAP06340 250 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 GNA11P29992 359 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 CCZ1BP86790 482 aa12.3□□□□□ -0.44
NECAP1-206ENST00000542095 CCZ1P86791 482 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms