RNA–Protein interactions for RNA: ENST00000542087.1

USP5-206, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 3

Gene USP5, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-206ENST00000542087 SLC39A5Q6ZMH5 540 aa17.13■□□□□ 0.33
USP5-206ENST00000542087 C16orf86Q6ZW13 317 aa17.13■□□□□ 0.33
USP5-206ENST00000542087 MAML3Q96JK9 1138 aa17.13■□□□□ 0.33
USP5-206ENST00000542087 HAUS7Q99871 368 aa17.13■□□□□ 0.33
USP5-206ENST00000542087 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.13■□□□□ 0.33
USP5-206ENST00000542087 PRKAG2Q9UGJ0 569 aa17.13■□□□□ 0.33
USP5-206ENST00000542087 POTEB2H3BUK9 544 aa17.12■□□□□ 0.33
USP5-206ENST00000542087 PRAMEF19Q5SWL8 479 aa17.12■□□□□ 0.33
USP5-206ENST00000542087 FAM109BQ6ICB4 259 aaPredicted RBP17.12■□□□□ 0.33
USP5-206ENST00000542087 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
USP5-206ENST00000542087 ADAMTS5Q9UNA0 930 aa17.12■□□□□ 0.33
USP5-206ENST00000542087 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
USP5-206ENST00000542087 VCANP13611 3396 aa17.12■□□□□ 0.33
USP5-206ENST00000542087 USP17L12C9JPN9 530 aa17.11■□□□□ 0.33
USP5-206ENST00000542087 USP17L21D6R901 530 aa17.11■□□□□ 0.33
USP5-206ENST00000542087 SLC25A27O95847 323 aa17.11■□□□□ 0.33
USP5-206ENST00000542087 FCER1AP12319 257 aa17.11■□□□□ 0.33
USP5-206ENST00000542087 EEF2P13639 858 aaKnown RBP17.11■□□□□ 0.33
USP5-206ENST00000542087 LRRC41Q15345 812 aa17.11■□□□□ 0.33
USP5-206ENST00000542087 UBE3CQ15386 1083 aa17.11■□□□□ 0.33
USP5-206ENST00000542087 TRIM60Q495X7 471 aa17.11■□□□□ 0.33
USP5-206ENST00000542087 FAM47AQ5JRC9 791 aa17.11■□□□□ 0.33
USP5-206ENST00000542087 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
USP5-206ENST00000542087 GUCD1Q96NT3 240 aa17.11■□□□□ 0.33
USP5-206ENST00000542087 FBXO28Q9NVF7 368 aa17.11■□□□□ 0.33
USP5-206ENST00000542087 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
USP5-206ENST00000542087 DDRGK1Q96HY6 314 aa17.1■□□□□ 0.33
USP5-206ENST00000542087 MMP19Q99542 508 aa17.1■□□□□ 0.33
USP5-206ENST00000542087 PRDM5Q9NQX1 630 aaPredicted RBP17.1■□□□□ 0.33
USP5-206ENST00000542087 SLC4A4Q9Y6R1 1079 aa17.1■□□□□ 0.33
USP5-206ENST00000542087 PRUNE2Q8WUY3 3088 aa17.1■□□□□ 0.33
USP5-206ENST00000542087 ADCYAP1R1P41586 468 aa17.09■□□□□ 0.33
USP5-206ENST00000542087 CTR9Q6PD62 1173 aa17.09■□□□□ 0.33
USP5-206ENST00000542087 RIOX2Q8IUF8 465 aa17.09■□□□□ 0.33
USP5-206ENST00000542087 KANSL2Q9H9L4 492 aa17.09■□□□□ 0.33
USP5-206ENST00000542087 PDLIM7Q9NR12 457 aa17.09■□□□□ 0.33
USP5-206ENST00000542087 NRBP1Q9UHY1 535 aa17.09■□□□□ 0.33
USP5-206ENST00000542087 PPP1R9AQ9ULJ8 1098 aa17.09■□□□□ 0.33
USP5-206ENST00000542087 ROBO3Q96MS0 1386 aa17.09■□□□□ 0.33
USP5-206ENST00000542087 VWA5AO00534 786 aa17.08■□□□□ 0.32
USP5-206ENST00000542087 PGK2P07205 417 aa17.08■□□□□ 0.32
USP5-206ENST00000542087 C1orf53Q5VUE5 145 aa17.08■□□□□ 0.32
USP5-206ENST00000542087 REPS2Q8NFH8 660 aa17.08■□□□□ 0.32
USP5-206ENST00000542087 FERMT2Q96AC1 680 aa17.08■□□□□ 0.32
USP5-206ENST00000542087 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.08■□□□□ 0.32
USP5-206ENST00000542087 PUS7LQ9H0K6 701 aaKnown RBP17.08■□□□□ 0.32
USP5-206ENST00000542087 GOPCQ9HD26 462 aa17.08■□□□□ 0.32
USP5-206ENST00000542087 ZNF214Q9UL59 606 aaPredicted RBP17.08■□□□□ 0.32
USP5-206ENST00000542087 PHF24Q9UPV7 400 aa17.08■□□□□ 0.32
USP5-206ENST00000542087 RARBP10826 455 aa17.07■□□□□ 0.32
USP5-206ENST00000542087 STAT3P40763 770 aa17.07■□□□□ 0.32
USP5-206ENST00000542087 SHHQ15465 462 aa17.07■□□□□ 0.32
USP5-206ENST00000542087 ZNF792Q3KQV3 632 aa17.07■□□□□ 0.32
USP5-206ENST00000542087 C9orf50Q5SZB4 431 aa17.07■□□□□ 0.32
USP5-206ENST00000542087 FAM83BQ5T0W9 1011 aa17.07■□□□□ 0.32
USP5-206ENST00000542087 ZNF697Q5TEC3 545 aa17.07■□□□□ 0.32
USP5-206ENST00000542087 ZSCAN25Q6NSZ9 544 aa17.07■□□□□ 0.32
USP5-206ENST00000542087 SH3RF1Q7Z6J0 888 aa17.07■□□□□ 0.32
USP5-206ENST00000542087 BADQ92934 168 aa17.07■□□□□ 0.32
USP5-206ENST00000542087 FAM161BQ96MY7 647 aa17.07■□□□□ 0.32
USP5-206ENST00000542087 TINF2Q9BSI4 451 aa17.07■□□□□ 0.32
USP5-206ENST00000542087 XPNPEP3Q9NQH7 507 aa17.07■□□□□ 0.32
USP5-206ENST00000542087 ARPP21Q9UBL0 812 aaPredicted RBP17.07■□□□□ 0.32
USP5-206ENST00000542087 DIS3Q9Y2L1 958 aaKnown RBP17.07■□□□□ 0.32
USP5-206ENST00000542087 MYH4Q9Y623 1939 aa17.06■□□□□ 0.32
USP5-206ENST00000542087 TRIM43BA6NCK2 446 aa17.06■□□□□ 0.32
USP5-206ENST00000542087 TAL1P17542 331 aaPredicted RBP17.06■□□□□ 0.32
USP5-206ENST00000542087 COPB2P35606 906 aa17.06■□□□□ 0.32
USP5-206ENST00000542087 KCTD2Q14681 263 aa17.06■□□□□ 0.32
USP5-206ENST00000542087 TRIM43Q96BQ3 446 aaPredicted RBP17.06■□□□□ 0.32
USP5-206ENST00000542087 LRRCC1Q9C099 1032 aa17.06■□□□□ 0.32
USP5-206ENST00000542087 CHMP4BQ9H444 224 aaKnown RBP17.06■□□□□ 0.32
USP5-206ENST00000542087 SPTBN5Q9NRC6 3674 aaKnown RBP17.06■□□□□ 0.32
USP5-206ENST00000542087 RAD21O60216 631 aa17.05■□□□□ 0.32
USP5-206ENST00000542087 SMARCA5O60264 1052 aaPredicted RBP17.05■□□□□ 0.32
USP5-206ENST00000542087 PGK1P00558 417 aa17.05■□□□□ 0.32
USP5-206ENST00000542087 ZNF865P0CJ78 1059 aaPredicted RBP17.05■□□□□ 0.32
USP5-206ENST00000542087 TLE2Q04725 743 aa17.05■□□□□ 0.32
USP5-206ENST00000542087 RNF180Q86T96 592 aa17.05■□□□□ 0.32
USP5-206ENST00000542087 AKR1A1P14550 325 aa17.04■□□□□ 0.32
USP5-206ENST00000542087 RASA1P20936 1047 aa17.04■□□□□ 0.32
USP5-206ENST00000542087 SBK1Q52WX2 424 aa17.04■□□□□ 0.32
USP5-206ENST00000542087 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.04■□□□□ 0.32
USP5-206ENST00000542087 LENG1Q96BZ8 264 aaPredicted RBP17.04■□□□□ 0.32
USP5-206ENST00000542087 STRBPQ96SI9 672 aaKnown RBP17.04■□□□□ 0.32
USP5-206ENST00000542087 NUP88Q99567 741 aaPredicted RBP17.04■□□□□ 0.32
USP5-206ENST00000542087 SLF1Q9BQI6 1058 aa17.04■□□□□ 0.32
USP5-206ENST00000542087 MCM3APO60318 1980 aa17.03■□□□□ 0.32
USP5-206ENST00000542087 A0A1W2PQ45 241 aaPredicted RBP17.03■□□□□ 0.32
USP5-206ENST00000542087 A0A1W2PQY0 241 aa17.03■□□□□ 0.32
USP5-206ENST00000542087 DIEXFQ68CQ4 756 aaKnown RBP17.03■□□□□ 0.32
USP5-206ENST00000542087 TEX13BQ9BXU2 312 aa17.03■□□□□ 0.32
USP5-206ENST00000542087 ECHDC1Q9NTX5 307 aa17.03■□□□□ 0.32
USP5-206ENST00000542087 TACC3Q9Y6A5 838 aa17.03■□□□□ 0.32
USP5-206ENST00000542087 GSG1L2A8MUP6 293 aa17.02■□□□□ 0.32
USP5-206ENST00000542087 ADAMTS4O75173 837 aa17.02■□□□□ 0.32
USP5-206ENST00000542087 NDUFB10O96000 172 aa17.02■□□□□ 0.32
USP5-206ENST00000542087 CLTBP09497 229 aa17.02■□□□□ 0.32
USP5-206ENST00000542087 ITGB8P26012 769 aa17.02■□□□□ 0.32
USP5-206ENST00000542087 SMAD3P84022 425 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms