RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 RAD21O60216 631 aa13.58□□□□□ -0.24
VTN-203ENST00000542029 IGHA2P01877 340 aa13.58□□□□□ -0.24
VTN-203ENST00000542029 COL6A1P12109 1028 aa13.58□□□□□ -0.24
VTN-203ENST00000542029 CNGA1P29973 690 aa13.58□□□□□ -0.24
VTN-203ENST00000542029 STAT3P40763 770 aa13.58□□□□□ -0.24
VTN-203ENST00000542029 ANKRD45Q5TZF3 282 aa13.58□□□□□ -0.24
VTN-203ENST00000542029 NAPBQ9H115 298 aa13.58□□□□□ -0.24
VTN-203ENST00000542029 PRO3102Q9H379 93 aa13.58□□□□□ -0.24
VTN-203ENST00000542029 EPB41L4AQ9HCS5 686 aaPredicted RBP13.58□□□□□ -0.24
VTN-203ENST00000542029 FLRT1Q9NZU1 646 aa13.58□□□□□ -0.24
VTN-203ENST00000542029 RBM27Q9P2N5 1060 aaKnown RBP13.58□□□□□ -0.24
VTN-203ENST00000542029 NRBP1Q9UHY1 535 aa13.58□□□□□ -0.24
VTN-203ENST00000542029 TRIOBPQ9H2D6 2365 aa13.58□□□□□ -0.24
VTN-203ENST00000542029 F5H6K3 240 aa13.57□□□□□ -0.24
VTN-203ENST00000542029 M0R2C6 588 aa13.57□□□□□ -0.24
VTN-203ENST00000542029 VWA5AO00534 786 aa13.57□□□□□ -0.24
VTN-203ENST00000542029 CYP2C19P33261 490 aa13.57□□□□□ -0.24
VTN-203ENST00000542029 KLRC3Q07444 240 aa13.57□□□□□ -0.24
VTN-203ENST00000542029 TMEM132BQ14DG7 1078 aa13.57□□□□□ -0.24
VTN-203ENST00000542029 FAM83BQ5T0W9 1011 aa13.57□□□□□ -0.24
VTN-203ENST00000542029 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
VTN-203ENST00000542029 ARRDC4Q8NCT1 418 aa13.57□□□□□ -0.24
VTN-203ENST00000542029 MKL1Q969V6 931 aa13.57□□□□□ -0.24
VTN-203ENST00000542029 EVI5LQ96CN4 794 aa13.57□□□□□ -0.24
VTN-203ENST00000542029 CRBNQ96SW2 442 aa13.57□□□□□ -0.24
VTN-203ENST00000542029 SLF1Q9BQI6 1058 aa13.57□□□□□ -0.24
VTN-203ENST00000542029 STAP2Q9UGK3 403 aa13.57□□□□□ -0.24
VTN-203ENST00000542029 DIS3Q9Y2L1 958 aaKnown RBP13.57□□□□□ -0.24
VTN-203ENST00000542029 NAV1Q8NEY1 1877 aa13.57□□□□□ -0.24
VTN-203ENST00000542029 IGKV6D-41A0A0C4DH26 115 aa13.56□□□□□ -0.24
VTN-203ENST00000542029 SEPT4O43236 478 aa13.56□□□□□ -0.24
VTN-203ENST00000542029 COBLO75128 1261 aa13.56□□□□□ -0.24
VTN-203ENST00000542029 TTLL1O95922 423 aa13.56□□□□□ -0.24
VTN-203ENST00000542029 CYBAP13498 195 aa13.56□□□□□ -0.24
VTN-203ENST00000542029 KCTD2Q14681 263 aa13.56□□□□□ -0.24
VTN-203ENST00000542029 C7orf61Q8IZ16 206 aa13.56□□□□□ -0.24
VTN-203ENST00000542029 PRPF38AQ8NAV1 312 aaKnown RBP13.56□□□□□ -0.24
VTN-203ENST00000542029 NEDD1Q8NHV4 660 aa13.56□□□□□ -0.24
VTN-203ENST00000542029 OTUD7AQ8TE49 926 aaPredicted RBP13.56□□□□□ -0.24
VTN-203ENST00000542029 TEX13BQ9BXU2 312 aa13.56□□□□□ -0.24
VTN-203ENST00000542029 FBXO28Q9NVF7 368 aa13.56□□□□□ -0.24
VTN-203ENST00000542029 MTMR4Q9NYA4 1195 aa13.56□□□□□ -0.24
VTN-203ENST00000542029 CLIP2Q9UDT6 1046 aa13.56□□□□□ -0.24
VTN-203ENST00000542029 CTDP1Q9Y5B0 961 aaPredicted RBP13.56□□□□□ -0.24
VTN-203ENST00000542029 DNM1LO00429 736 aa13.55□□□□□ -0.24
VTN-203ENST00000542029 ZBED4O75132 1171 aa13.55□□□□□ -0.24
VTN-203ENST00000542029 NDUFB10O96000 172 aa13.55□□□□□ -0.24
VTN-203ENST00000542029 TSPY3P0CV98 308 aa13.55□□□□□ -0.24
VTN-203ENST00000542029 TSPY8P0CW00 308 aa13.55□□□□□ -0.24
VTN-203ENST00000542029 FDX1P10109 184 aa13.55□□□□□ -0.24
VTN-203ENST00000542029 BMP8BP34820 402 aa13.55□□□□□ -0.24
VTN-203ENST00000542029 PPARAQ07869 468 aa13.55□□□□□ -0.24
VTN-203ENST00000542029 STK11IPQ8N1F8 1099 aa13.55□□□□□ -0.24
VTN-203ENST00000542029 CEP95Q96GE4 821 aa13.55□□□□□ -0.24
VTN-203ENST00000542029 SEC62Q99442 399 aaKnown RBP13.55□□□□□ -0.24
VTN-203ENST00000542029 MMP19Q99542 508 aa13.55□□□□□ -0.24
VTN-203ENST00000542029 ZNF214Q9UL59 606 aaPredicted RBP13.55□□□□□ -0.24
VTN-203ENST00000542029 PFASO15067 1338 aa13.55□□□□□ -0.24
VTN-203ENST00000542029 SALL3Q9BXA9 1300 aa13.55□□□□□ -0.24
VTN-203ENST00000542029 ATP2A1O14983 1001 aa13.54□□□□□ -0.24
VTN-203ENST00000542029 PRDM1O75626 825 aa13.54□□□□□ -0.24
VTN-203ENST00000542029 PDE1AP54750 535 aa13.54□□□□□ -0.24
VTN-203ENST00000542029 MSL3Q8N5Y2 521 aaKnown RBP13.54□□□□□ -0.24
VTN-203ENST00000542029 GMCL1P1Q8NEA9 526 aa13.54□□□□□ -0.24
VTN-203ENST00000542029 REPS2Q8NFH8 660 aa13.54□□□□□ -0.24
VTN-203ENST00000542029 MAML3Q96JK9 1138 aa13.54□□□□□ -0.24
VTN-203ENST00000542029 GDF15Q99988 308 aa13.54□□□□□ -0.24
VTN-203ENST00000542029 RWDD1Q9H446 243 aaPredicted RBP13.54□□□□□ -0.24
VTN-203ENST00000542029 HELLSQ9NRZ9 838 aa13.54□□□□□ -0.24
VTN-203ENST00000542029 FEM1BQ9UK73 627 aa13.54□□□□□ -0.24
VTN-203ENST00000542029 ZMYND8Q9ULU4 1186 aaPredicted RBP13.54□□□□□ -0.24
VTN-203ENST00000542029 PLIN4Q96Q06 1357 aa13.54□□□□□ -0.24
VTN-203ENST00000542029 OAZ1P54368 228 aa13.53□□□□□ -0.24
VTN-203ENST00000542029 TFAP4Q01664 338 aa13.53□□□□□ -0.24
VTN-203ENST00000542029 TRPV1Q8NER1 839 aa13.53□□□□□ -0.24
VTN-203ENST00000542029 TINF2Q9BSI4 451 aa13.53□□□□□ -0.24
VTN-203ENST00000542029 SENP6Q9GZR1 1112 aaPredicted RBP13.53□□□□□ -0.24
VTN-203ENST00000542029 FBXO40Q9UH90 709 aa13.53□□□□□ -0.24
VTN-203ENST00000542029 KBTBD13C9JR72 458 aa13.52□□□□□ -0.25
VTN-203ENST00000542029 ALX1Q15699 326 aa13.52□□□□□ -0.25
VTN-203ENST00000542029 ZNF792Q3KQV3 632 aa13.52□□□□□ -0.25
VTN-203ENST00000542029 SLFN13Q68D06 897 aa13.52□□□□□ -0.25
VTN-203ENST00000542029 SNRNP48Q6IEG0 339 aaKnown RBP13.52□□□□□ -0.25
VTN-203ENST00000542029 CHURC1Q8WUH1 139 aa13.52□□□□□ -0.25
VTN-203ENST00000542029 DDX11Q96FC9 970 aa13.52□□□□□ -0.25
VTN-203ENST00000542029 NUP88Q99567 741 aaPredicted RBP13.52□□□□□ -0.25
VTN-203ENST00000542029 CNPY2Q9Y2B0 182 aa13.52□□□□□ -0.25
VTN-203ENST00000542029 TSPY2A6NKD2 308 aa13.51□□□□□ -0.25
VTN-203ENST00000542029 RARBP10826 455 aa13.51□□□□□ -0.25
VTN-203ENST00000542029 BMP3P12645 472 aa13.51□□□□□ -0.25
VTN-203ENST00000542029 LRRC26Q2I0M4 334 aa13.51□□□□□ -0.25
VTN-203ENST00000542029 MCMDC2Q4G0Z9 681 aa13.51□□□□□ -0.25
VTN-203ENST00000542029 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.51□□□□□ -0.25
VTN-203ENST00000542029 FAM160B2Q86V87 743 aa13.51□□□□□ -0.25
VTN-203ENST00000542029 SMC5Q8IY18 1101 aa13.51□□□□□ -0.25
VTN-203ENST00000542029 CHST13Q8NET6 341 aa13.51□□□□□ -0.25
VTN-203ENST00000542029 KIFC2Q96AC6 838 aa13.51□□□□□ -0.25
VTN-203ENST00000542029 GMCL1Q96IK5 515 aa13.51□□□□□ -0.25
VTN-203ENST00000542029 SLC38A10Q9HBR0 1119 aa13.51□□□□□ -0.25
VTN-203ENST00000542029 PRKAG2Q9UGJ0 569 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms