RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 POTEBQ6S5H4 581 aa11.69□□□□□ -0.54
YBX3-211ENST00000541351 NCAPG2Q86XI2 1143 aa11.69□□□□□ -0.54
YBX3-211ENST00000541351 FAM126BQ8IXS8 530 aa11.69□□□□□ -0.54
YBX3-211ENST00000541351 MSL3Q8N5Y2 521 aaKnown RBP11.69□□□□□ -0.54
YBX3-211ENST00000541351 SYNRGQ9UMZ2 1314 aa11.68□□□□□ -0.54
YBX3-211ENST00000541351 DUSP11O75319 330 aaKnown RBP11.68□□□□□ -0.54
YBX3-211ENST00000541351 CABYRO75952 493 aa11.68□□□□□ -0.54
YBX3-211ENST00000541351 PLS1Q14651 629 aa11.68□□□□□ -0.54
YBX3-211ENST00000541351 KCTD2Q14681 263 aa11.68□□□□□ -0.54
YBX3-211ENST00000541351 HFE2Q6ZVN8 426 aa11.68□□□□□ -0.54
YBX3-211ENST00000541351 METTL16Q86W50 562 aaKnown RBP11.68□□□□□ -0.54
YBX3-211ENST00000541351 SUGP1Q8IWZ8 645 aaKnown RBP11.68□□□□□ -0.54
YBX3-211ENST00000541351 KLHDC9Q8NEP7 349 aa11.68□□□□□ -0.54
YBX3-211ENST00000541351 RPAP3Q9H6T3 665 aaPredicted RBP11.68□□□□□ -0.54
YBX3-211ENST00000541351 CABP5Q9NP86 173 aa11.68□□□□□ -0.54
YBX3-211ENST00000541351 A0A0G2JMZ2 1700 aa11.67□□□□□ -0.54
YBX3-211ENST00000541351 RFXAPO00287 272 aa11.67□□□□□ -0.54
YBX3-211ENST00000541351 C6orf222P0C671 652 aaPredicted RBP11.67□□□□□ -0.54
YBX3-211ENST00000541351 MYOGP15173 224 aa11.67□□□□□ -0.54
YBX3-211ENST00000541351 KCNA5P22460 613 aa11.67□□□□□ -0.54
YBX3-211ENST00000541351 COPB2P35606 906 aa11.67□□□□□ -0.54
YBX3-211ENST00000541351 PHKA1P46020 1223 aa11.67□□□□□ -0.54
YBX3-211ENST00000541351 GRB10Q13322 594 aa11.67□□□□□ -0.54
YBX3-211ENST00000541351 KAZALD1Q96I82 304 aa11.67□□□□□ -0.54
YBX3-211ENST00000541351 POP1Q99575 1024 aaKnown RBP11.67□□□□□ -0.54
YBX3-211ENST00000541351 SIL1Q9H173 461 aa11.67□□□□□ -0.54
YBX3-211ENST00000541351 CERS4Q9HA82 394 aa11.67□□□□□ -0.54
YBX3-211ENST00000541351 CHD7Q9P2D1 2997 aa11.67□□□□□ -0.54
YBX3-211ENST00000541351 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.66□□□□□ -0.54
YBX3-211ENST00000541351 GH2P01242 217 aa11.66□□□□□ -0.54
YBX3-211ENST00000541351 ASGR1P07306 291 aa11.66□□□□□ -0.54
YBX3-211ENST00000541351 NBPF7P0C2Y1 421 aaPredicted RBP11.66□□□□□ -0.54
YBX3-211ENST00000541351 RAB3GAP1Q15042 981 aa11.66□□□□□ -0.54
YBX3-211ENST00000541351 CCDC102BQ68D86 513 aa11.66□□□□□ -0.54
YBX3-211ENST00000541351 MMP19Q99542 508 aa11.66□□□□□ -0.54
YBX3-211ENST00000541351 TANGO6Q9C0B7 1094 aa11.66□□□□□ -0.54
YBX3-211ENST00000541351 ZNF318Q5VUA4 2279 aa11.66□□□□□ -0.54
YBX3-211ENST00000541351 GRXCR2A6NFK2 248 aa11.65□□□□□ -0.54
YBX3-211ENST00000541351 CIAO1O76071 339 aa11.65□□□□□ -0.54
YBX3-211ENST00000541351 CD4P01730 458 aa11.65□□□□□ -0.54
YBX3-211ENST00000541351 ZNF865P0CJ78 1059 aaPredicted RBP11.65□□□□□ -0.54
YBX3-211ENST00000541351 TAP1Q03518 808 aa11.65□□□□□ -0.54
YBX3-211ENST00000541351 RASGRF1Q13972 1273 aa11.65□□□□□ -0.54
YBX3-211ENST00000541351 MVPQ14764 893 aaKnown RBP11.65□□□□□ -0.54
YBX3-211ENST00000541351 GNASQ5JWF2 1037 aa11.65□□□□□ -0.54
YBX3-211ENST00000541351 KRT40Q6A162 431 aa11.65□□□□□ -0.54
YBX3-211ENST00000541351 BMP8AQ7Z5Y6 402 aa11.65□□□□□ -0.54
YBX3-211ENST00000541351 KLHDC4Q8TBB5 520 aa11.65□□□□□ -0.54
YBX3-211ENST00000541351 PHOX2BQ99453 314 aa11.65□□□□□ -0.54
YBX3-211ENST00000541351 RAI14Q9P0K7 980 aa11.65□□□□□ -0.54
YBX3-211ENST00000541351 CTNNA3Q9UI47 895 aa11.65□□□□□ -0.54
YBX3-211ENST00000541351 GBF1Q92538 1859 aa11.65□□□□□ -0.54
YBX3-211ENST00000541351 PTPRZ1P23471 2315 aaPredicted RBP11.65□□□□□ -0.54
YBX3-211ENST00000541351 IL16Q14005 1332 aa11.64□□□□□ -0.55
YBX3-211ENST00000541351 ZEB2O60315 1214 aa11.64□□□□□ -0.55
YBX3-211ENST00000541351 IL9P15248 144 aa11.64□□□□□ -0.55
YBX3-211ENST00000541351 CCL23P55773 120 aa11.64□□□□□ -0.55
YBX3-211ENST00000541351 NBPF20Q3BBV1 942 aa11.64□□□□□ -0.55
YBX3-211ENST00000541351 CCSAPQ6IQ19 270 aaPredicted RBP11.64□□□□□ -0.55
YBX3-211ENST00000541351 CERS3Q8IU89 383 aa11.64□□□□□ -0.55
YBX3-211ENST00000541351 ANKRD44Q8N8A2 993 aa11.64□□□□□ -0.55
YBX3-211ENST00000541351 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.64□□□□□ -0.55
YBX3-211ENST00000541351 NSUN4Q96CB9 384 aaKnown RBP11.64□□□□□ -0.55
YBX3-211ENST00000541351 TRANK1O15050 2925 aa11.63□□□□□ -0.55
YBX3-211ENST00000541351 CACNA1BQ00975 2339 aa11.63□□□□□ -0.55
YBX3-211ENST00000541351 IGSF3O75054 1194 aa11.63□□□□□ -0.55
YBX3-211ENST00000541351 SUPT20HL2P0C7V6 817 aa11.63□□□□□ -0.55
YBX3-211ENST00000541351 RFC2P35250 354 aa11.63□□□□□ -0.55
YBX3-211ENST00000541351 IL15P40933 162 aaPredicted RBP11.63□□□□□ -0.55
YBX3-211ENST00000541351 ID4P47928 161 aa11.63□□□□□ -0.55
YBX3-211ENST00000541351 CCDC27Q2M243 656 aa11.63□□□□□ -0.55
YBX3-211ENST00000541351 ADHFE1Q8IWW8 467 aa11.63□□□□□ -0.55
YBX3-211ENST00000541351 PRSS33Q8NF86 280 aa11.63□□□□□ -0.55
YBX3-211ENST00000541351 ATOH1Q92858 354 aaPredicted RBP11.63□□□□□ -0.55
YBX3-211ENST00000541351 ZHX1Q9UKY1 873 aaPredicted RBP11.63□□□□□ -0.55
YBX3-211ENST00000541351 AKAP2Q9Y2D5 859 aa11.63□□□□□ -0.55
YBX3-211ENST00000541351 SMCHD1A6NHR9 2005 aa11.63□□□□□ -0.55
YBX3-211ENST00000541351 FLT1P17948 1338 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 BRWD1Q9NSI6 2320 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 EPOPA6NHQ4 379 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 VAMP4O75379 141 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 KCNJ6P48051 423 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 GJA9P57773 515 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 JAG1P78504 1218 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 ABCB5Q2M3G0 1257 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 ZNF792Q3KQV3 632 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 CERKLQ49MI3 558 aaPredicted RBP11.62□□□□□ -0.55
YBX3-211ENST00000541351 HERC4Q5GLZ8 1057 aaPredicted RBP11.62□□□□□ -0.55
YBX3-211ENST00000541351 HERC6Q8IVU3 1022 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 TGFBRAP1Q8WUH2 860 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 PBXIP1Q96AQ6 731 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 NOC4LQ9BVI4 516 aaKnown RBP11.62□□□□□ -0.55
YBX3-211ENST00000541351 DNAJC18Q9H819 358 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 LRP2BPQ9P2M1 347 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 HDAC5Q9UQL6 1122 aa11.62□□□□□ -0.55
YBX3-211ENST00000541351 CFAP54Q96N23 3096 aa11.61□□□□□ -0.55
YBX3-211ENST00000541351 FLOT1O75955 427 aa11.61□□□□□ -0.55
YBX3-211ENST00000541351 RGS20O76081 388 aa11.61□□□□□ -0.55
YBX3-211ENST00000541351 BAIAP3O94812 1187 aa11.61□□□□□ -0.55
YBX3-211ENST00000541351 DSG3P32926 999 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms