RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 TIGD1Q96MW7 591 aa11.71□□□□□ -0.54
LMO3-224ENST00000540848 SLC26A6Q9BXS9 759 aa11.71□□□□□ -0.54
LMO3-224ENST00000540848 ZNF287Q9HBT7 754 aa11.71□□□□□ -0.54
LMO3-224ENST00000540848 DCP1AQ9NPI6 582 aaPredicted RBP11.71□□□□□ -0.54
LMO3-224ENST00000540848 ANO10Q9NW15 660 aa11.71□□□□□ -0.54
LMO3-224ENST00000540848 TFCP2L1Q9NZI6 479 aa11.71□□□□□ -0.54
LMO3-224ENST00000540848 TACC3Q9Y6A5 838 aa11.71□□□□□ -0.54
LMO3-224ENST00000540848 BAZ2AQ9UIF9 1905 aaKnown RBP11.7□□□□□ -0.54
LMO3-224ENST00000540848 LRRC37AA6NMS7 1700 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 ROBO3Q96MS0 1386 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 POTECB2RU33 542 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 USP17L12C9JPN9 530 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 USP17L21D6R901 530 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 ADCY5O95622 1261 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 MMP1P03956 469 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 POLR3DP05423 398 aaPredicted RBP11.7□□□□□ -0.54
LMO3-224ENST00000540848 DYNLL1P63167 89 aaKnown RBP11.7□□□□□ -0.54
LMO3-224ENST00000540848 CHAF1AQ13111 956 aaPredicted RBP11.7□□□□□ -0.54
LMO3-224ENST00000540848 TPRNQ4KMQ1 711 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 RILPL1Q5EBL4 403 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 SMIM5Q71RC9 77 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 NOSTRINQ8IVI9 506 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 FMR1NBQ8N0W7 255 aaPredicted RBP11.7□□□□□ -0.54
LMO3-224ENST00000540848 FLAD1Q8NFF5 587 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 TBC1D22AQ8WUA7 517 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 PHKBQ93100 1093 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 MAP3K14Q99558 947 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 NAT10Q9H0A0 1025 aaKnown RBP11.7□□□□□ -0.54
LMO3-224ENST00000540848 SENP2Q9HC62 589 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 GGA1Q9UJY5 639 aa11.7□□□□□ -0.54
LMO3-224ENST00000540848 BRWD3Q6RI45 1802 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 FAM237AA0A1B0GTK4 181 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 KIF28PB7ZC32 967 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 IL1R1P14778 569 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 PRDX5P30044 214 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 ANO6Q4KMQ2 910 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 OTUD7BQ6GQQ9 843 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.69□□□□□ -0.54
LMO3-224ENST00000540848 NBPF11Q86T75 865 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 RAB11FIP4Q86YS3 637 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 CKAP2LQ8IYA6 745 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 ELOA2Q8IYF1 753 aaPredicted RBP11.69□□□□□ -0.54
LMO3-224ENST00000540848 FAM177A1Q8N128 213 aaPredicted RBP11.69□□□□□ -0.54
LMO3-224ENST00000540848 ENAHQ8N8S7 591 aaPredicted RBP11.69□□□□□ -0.54
LMO3-224ENST00000540848 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.69□□□□□ -0.54
LMO3-224ENST00000540848 INCENPQ9NQS7 918 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 AATFQ9NY61 560 aaKnown RBP eCLIP11.69□□□□□ -0.54
LMO3-224ENST00000540848 CEP131Q9UPN4 1083 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 CLIC4Q9Y696 253 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 MYH6P13533 1939 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 MYH2Q9UKX2 1941 aa11.69□□□□□ -0.54
LMO3-224ENST00000540848 WTIPA6NIX2 430 aaPredicted RBP11.68□□□□□ -0.54
LMO3-224ENST00000540848 ST8SIA5O15466 376 aa11.68□□□□□ -0.54
LMO3-224ENST00000540848 PRPF3O43395 683 aaKnown RBP11.68□□□□□ -0.54
LMO3-224ENST00000540848 CUTAO60888 179 aa11.68□□□□□ -0.54
LMO3-224ENST00000540848 BMP15O95972 392 aa11.68□□□□□ -0.54
LMO3-224ENST00000540848 RXRAP19793 462 aa11.68□□□□□ -0.54
LMO3-224ENST00000540848 ZNF165P49910 485 aa11.68□□□□□ -0.54
LMO3-224ENST00000540848 ZRSR1Q15695 479 aaKnown RBP11.68□□□□□ -0.54
LMO3-224ENST00000540848 KRI1Q8N9T8 703 aaKnown RBP11.68□□□□□ -0.54
LMO3-224ENST00000540848 MYL10Q9BUA6 226 aa11.68□□□□□ -0.54
LMO3-224ENST00000540848 FTOQ9C0B1 505 aaKnown RBP eCLIP11.68□□□□□ -0.54
LMO3-224ENST00000540848 GOLPH3LQ9H4A5 285 aa11.68□□□□□ -0.54
LMO3-224ENST00000540848 BRMS1Q9HCU9 246 aa11.68□□□□□ -0.54
LMO3-224ENST00000540848 PCDHGC3Q9UN70 934 aa11.68□□□□□ -0.54
LMO3-224ENST00000540848 SUGT1Q9Y2Z0 365 aa11.68□□□□□ -0.54
LMO3-224ENST00000540848 NRXN2Q9P2S2 1712 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 PLSCR1O15162 318 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 UFL1O94874 794 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 SSTR3P32745 418 aaPredicted RBP11.67□□□□□ -0.54
LMO3-224ENST00000540848 KIF5BP33176 963 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 AXDND1Q5T1B0 1012 aaPredicted RBP11.67□□□□□ -0.54
LMO3-224ENST00000540848 CCDC144CPQ8IYA2 1237 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 CEP57L1Q8IYX8 460 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 NLGN1Q8N2Q7 840 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 CTCFLQ8NI51 663 aaPredicted RBP11.67□□□□□ -0.54
LMO3-224ENST00000540848 NUP133Q8WUM0 1156 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 ANKS1AQ92625 1134 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 SDF4Q9BRK5 362 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 ZKSCAN3Q9BRR0 538 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 CBX8Q9HC52 389 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 NAV1Q8NEY1 1877 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 MROH7-TTC4A0A0A0MT08 1334 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 GOLGA6L19H0YKK7 550 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 POLRMTO00411 1230 aaKnown RBP11.67□□□□□ -0.54
LMO3-224ENST00000540848 PPFIA3O75145 1194 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 USP5P45974 858 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 GNAQP50148 359 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 RBM6P78332 1123 aaKnown RBP11.67□□□□□ -0.54
LMO3-224ENST00000540848 GPSM2P81274 684 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 KIAA2012Q0VF49 1180 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 TROAPQ12815 778 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 TRIM32Q13049 653 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 PTPAQ15257 358 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 TXNRD1Q16881 649 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 C12orf60Q5U649 245 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 ZNF772Q68DY9 489 aaPredicted RBP11.67□□□□□ -0.54
LMO3-224ENST00000540848 SARM1Q6SZW1 724 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 TXNRD3Q86VQ6 643 aa11.67□□□□□ -0.54
LMO3-224ENST00000540848 DGKHQ86XP1 1220 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms