RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 SLFNL1Q499Z3 407 aa23.07■■□□□ 1.28
SOD2-212ENST00000540491 C1orf53Q5VUE5 145 aa23.07■■□□□ 1.28
SOD2-212ENST00000540491 DEFB123Q8N688 67 aa23.07■■□□□ 1.28
SOD2-212ENST00000540491 KBTBD3Q8NAB2 608 aa23.07■■□□□ 1.28
SOD2-212ENST00000540491 SLC17A8Q8NDX2 589 aa23.07■■□□□ 1.28
SOD2-212ENST00000540491 PPP1R9AQ9ULJ8 1098 aa23.07■■□□□ 1.28
SOD2-212ENST00000540491 A0A0G2JMZ2 1700 aa23.06■■□□□ 1.28
SOD2-212ENST00000540491 CYP2D7A0A087X1C5 515 aa23.06■■□□□ 1.28
SOD2-212ENST00000540491 VWA5AO00534 786 aa23.06■■□□□ 1.28
SOD2-212ENST00000540491 GNAT2P19087 354 aa23.06■■□□□ 1.28
SOD2-212ENST00000540491 STAT3P40763 770 aa23.06■■□□□ 1.28
SOD2-212ENST00000540491 MMP19Q99542 508 aa23.06■■□□□ 1.28
SOD2-212ENST00000540491 MKNK2Q9HBH9 465 aa23.06■■□□□ 1.28
SOD2-212ENST00000540491 NYAP2Q9P242 653 aa23.06■■□□□ 1.28
SOD2-212ENST00000540491 RLFQ13129 1914 aa23.06■■□□□ 1.28
SOD2-212ENST00000540491 RTP1P59025 263 aa23.05■■□□□ 1.28
SOD2-212ENST00000540491 MDM2Q00987 491 aaPredicted RBP23.05■■□□□ 1.28
SOD2-212ENST00000540491 SLC39A5Q6ZMH5 540 aa23.05■■□□□ 1.28
SOD2-212ENST00000540491 CLEC10AQ8IUN9 316 aa23.05■■□□□ 1.28
SOD2-212ENST00000540491 MSL3Q8N5Y2 521 aaKnown RBP23.05■■□□□ 1.28
SOD2-212ENST00000540491 APPBP2Q92624 585 aa23.05■■□□□ 1.28
SOD2-212ENST00000540491 DCTPP1Q9H773 170 aa23.05■■□□□ 1.28
SOD2-212ENST00000540491 SYNPO2Q9UMS6 1093 aa23.05■■□□□ 1.28
SOD2-212ENST00000540491 STXBP5LQ9Y2K9 1186 aa23.05■■□□□ 1.28
SOD2-212ENST00000540491 ATN1P54259 1190 aaPredicted RBP23.04■■□□□ 1.28
SOD2-212ENST00000540491 SNX17Q15036 470 aa23.04■■□□□ 1.28
SOD2-212ENST00000540491 GJC2Q5T442 439 aaPredicted RBP23.04■■□□□ 1.28
SOD2-212ENST00000540491 FAM109BQ6ICB4 259 aaPredicted RBP23.04■■□□□ 1.28
SOD2-212ENST00000540491 RARBP10826 455 aa23.03■■□□□ 1.28
SOD2-212ENST00000540491 TINF2Q9BSI4 451 aa23.03■■□□□ 1.28
SOD2-212ENST00000540491 MTMR10Q9NXD2 777 aa23.03■■□□□ 1.28
SOD2-212ENST00000540491 ZNF214Q9UL59 606 aaPredicted RBP23.03■■□□□ 1.28
SOD2-212ENST00000540491 MYH8P13535 1937 aa23.03■■□□□ 1.28
SOD2-212ENST00000540491 ROBO3Q96MS0 1386 aa23.02■■□□□ 1.28
SOD2-212ENST00000540491 GSG1L2A8MUP6 293 aa23.02■■□□□ 1.28
SOD2-212ENST00000540491 LRRC41Q15345 812 aa23.02■■□□□ 1.28
SOD2-212ENST00000540491 SAMD1Q6SPF0 538 aaPredicted RBP23.02■■□□□ 1.28
SOD2-212ENST00000540491 PRPF38AQ8NAV1 312 aaKnown RBP23.02■■□□□ 1.28
SOD2-212ENST00000540491 TEX13BQ9BXU2 312 aa23.02■■□□□ 1.28
SOD2-212ENST00000540491 FRMPD3Q5JV73 1810 aa23.02■■□□□ 1.28
SOD2-212ENST00000540491 BAZ2AQ9UIF9 1905 aaKnown RBP23.02■■□□□ 1.28
SOD2-212ENST00000540491 SMIM22K7EJ46 135 aa23.01■■□□□ 1.27
SOD2-212ENST00000540491 ATP2A1O14983 1001 aa23.01■■□□□ 1.27
SOD2-212ENST00000540491 RNF113AO15541 343 aaKnown RBP23.01■■□□□ 1.27
SOD2-212ENST00000540491 SMARCA5O60264 1052 aaPredicted RBP23.01■■□□□ 1.27
SOD2-212ENST00000540491 CHGBP05060 677 aa23.01■■□□□ 1.27
SOD2-212ENST00000540491 RASA1P20936 1047 aa23.01■■□□□ 1.27
SOD2-212ENST00000540491 ZNF792Q3KQV3 632 aa23.01■■□□□ 1.27
SOD2-212ENST00000540491 FAM83BQ5T0W9 1011 aa23.01■■□□□ 1.27
SOD2-212ENST00000540491 RNF180Q86T96 592 aa23.01■■□□□ 1.27
SOD2-212ENST00000540491 REPS2Q8NFH8 660 aa23.01■■□□□ 1.27
SOD2-212ENST00000540491 SLF1Q9BQI6 1058 aa23.01■■□□□ 1.27
SOD2-212ENST00000540491 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.01■■□□□ 1.27
SOD2-212ENST00000540491 FBXO28Q9NVF7 368 aa23.01■■□□□ 1.27
SOD2-212ENST00000540491 ATP11BQ9Y2G3 1177 aa23.01■■□□□ 1.27
SOD2-212ENST00000540491 F5H6K3 240 aa23■■□□□ 1.27
SOD2-212ENST00000540491 RAD21O60216 631 aa23■■□□□ 1.27
SOD2-212ENST00000540491 KLRC3Q07444 240 aa23■■□□□ 1.27
SOD2-212ENST00000540491 PRAMEF19Q5SWL8 479 aa23■■□□□ 1.27
SOD2-212ENST00000540491 ZNF444Q8N0Y2 327 aaPredicted RBP23■■□□□ 1.27
SOD2-212ENST00000540491 OSBP2Q969R2 916 aa23■■□□□ 1.27
SOD2-212ENST00000540491 XPNPEP3Q9NQH7 507 aa23■■□□□ 1.27
SOD2-212ENST00000540491 CNPY2Q9Y2B0 182 aa23■■□□□ 1.27
SOD2-212ENST00000540491 COL6A3P12111 3177 aa23■■□□□ 1.27
SOD2-212ENST00000540491 ERC2O15083 957 aa22.99■■□□□ 1.27
SOD2-212ENST00000540491 AKR1A1P14550 325 aa22.99■■□□□ 1.27
SOD2-212ENST00000540491 C20orf194Q5TEA3 1177 aa22.99■■□□□ 1.27
SOD2-212ENST00000540491 MKL1Q969V6 931 aa22.99■■□□□ 1.27
SOD2-212ENST00000540491 NACAP1Q9BZK3 213 aa22.99■■□□□ 1.27
SOD2-212ENST00000540491 PHF24Q9UPV7 400 aa22.99■■□□□ 1.27
SOD2-212ENST00000540491 MYH7P12883 1935 aa22.99■■□□□ 1.27
SOD2-212ENST00000540491 MINDY4BA8MYZ0 360 aa22.98■■□□□ 1.27
SOD2-212ENST00000540491 POTEB2H3BUK9 544 aa22.98■■□□□ 1.27
SOD2-212ENST00000540491 GPAA1O43292 621 aa22.98■■□□□ 1.27
SOD2-212ENST00000540491 FDX1P10109 184 aa22.98■■□□□ 1.27
SOD2-212ENST00000540491 ADCYAP1R1P41586 468 aa22.98■■□□□ 1.27
SOD2-212ENST00000540491 FAM47AQ5JRC9 791 aa22.98■■□□□ 1.27
SOD2-212ENST00000540491 PPP4R3BQ5MIZ7 849 aa22.98■■□□□ 1.27
SOD2-212ENST00000540491 ANO1Q5XXA6 986 aa22.98■■□□□ 1.27
SOD2-212ENST00000540491 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.98■■□□□ 1.27
SOD2-212ENST00000540491 TSEN34Q9BSV6 310 aaKnown RBP22.98■■□□□ 1.27
SOD2-212ENST00000540491 TACC3Q9Y6A5 838 aa22.98■■□□□ 1.27
SOD2-212ENST00000540491 TTC41PQ6P2S7 1318 aa22.98■■□□□ 1.27
SOD2-212ENST00000540491 DNAH12Q6ZR08 3092 aa22.97■■□□□ 1.27
SOD2-212ENST00000540491 PATL2C9JE40 543 aaKnown RBP22.97■■□□□ 1.27
SOD2-212ENST00000540491 ZBED4O75132 1171 aa22.97■■□□□ 1.27
SOD2-212ENST00000540491 NDUFB10O96000 172 aa22.97■■□□□ 1.27
SOD2-212ENST00000540491 MYCNP04198 464 aaPredicted RBP22.97■■□□□ 1.27
SOD2-212ENST00000540491 PGK2P07205 417 aa22.97■■□□□ 1.27
SOD2-212ENST00000540491 TDO2P48775 406 aa22.97■■□□□ 1.27
SOD2-212ENST00000540491 ZNF467Q7Z7K2 595 aaPredicted RBP22.97■■□□□ 1.27
SOD2-212ENST00000540491 DDX11Q96FC9 970 aa22.97■■□□□ 1.27
SOD2-212ENST00000540491 FBXO40Q9UH90 709 aa22.97■■□□□ 1.27
SOD2-212ENST00000540491 FEM1BQ9UK73 627 aa22.97■■□□□ 1.27
SOD2-212ENST00000540491 CTDP1Q9Y5B0 961 aaPredicted RBP22.97■■□□□ 1.27
SOD2-212ENST00000540491 SYNGAP1Q96PV0 1343 aa22.97■■□□□ 1.27
SOD2-212ENST00000540491 IGKV6D-41A0A0C4DH26 115 aa22.96■■□□□ 1.27
SOD2-212ENST00000540491 APPP05067 770 aa22.96■■□□□ 1.27
SOD2-212ENST00000540491 SLC3A2P08195 630 aaKnown RBP22.96■■□□□ 1.27
SOD2-212ENST00000540491 OAZ1P54368 228 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms