RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 CASP8Q14790 479 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 WWC2Q6AWC2 1192 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 CHST3Q7LGC8 479 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 RALYLQ86SE5 291 aaKnown RBP9.79□□□□□ -0.84
DDB1-217ENST00000540166 TICAM2Q86XR7 235 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 SUGP1Q8IWZ8 645 aaKnown RBP9.79□□□□□ -0.84
DDB1-217ENST00000540166 IQUBQ8NA54 791 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 SUCLG2Q96I99 432 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 CABS1Q96KC9 395 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 KIAA1468Q9P260 1216 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 GOLGA6CA6NDK9 693 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 TCP10L2B9ZVM9 353 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 H3BQF6 201 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 FZD9O00144 591 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 TRPA1O75762 1119 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 GOLGA6DP0CG33 693 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 CLNS1AP54105 237 aaKnown RBP9.78□□□□□ -0.84
DDB1-217ENST00000540166 NAA25Q14CX7 972 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 DCAF15Q66K64 600 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 B4GALNT4Q76KP1 1039 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 FCHSD1Q86WN1 690 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 ABCB6Q9NP58 842 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 MYOZ2Q9NPC6 264 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 GOLGA6AQ9NYA3 693 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 KCNJ6P48051 423 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 DPCR1Q3MIW9 517 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 POLLQ9UGP5 575 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 DACH1Q9UI36 760 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 EP400Q96L91 3159 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 CA12O43570 354 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 LDHBP07195 334 aaKnown RBP9.78□□□□□ -0.84
DDB1-217ENST00000540166 FOXR1Q6PIV2 292 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 DHX40Q8IX18 779 aaKnown RBP9.78□□□□□ -0.84
DDB1-217ENST00000540166 WDR66Q8TBY9 1149 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 DESI2Q9BSY9 194 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 TLR7Q9NYK1 1049 aaKnown RBP9.78□□□□□ -0.84
DDB1-217ENST00000540166 TSKSQ9UJT2 592 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 CDHR2Q9BYE9 1310 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 ANKRD26Q9UPS8 1709 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 ITGB4P16144 1822 aa9.78□□□□□ -0.84
DDB1-217ENST00000540166 GOLGA8FQ08AF8 430 aa9.77□□□□□ -0.84
DDB1-217ENST00000540166 GOLGA8DPQ0D2H9 430 aa9.77□□□□□ -0.84
DDB1-217ENST00000540166 MTX1Q13505 466 aa9.77□□□□□ -0.84
DDB1-217ENST00000540166 STRIP1Q5VSL9 837 aa9.77□□□□□ -0.84
DDB1-217ENST00000540166 MROH5Q6ZUA9 1318 aa9.77□□□□□ -0.84
DDB1-217ENST00000540166 RAB11FIP4Q86YS3 637 aa9.77□□□□□ -0.84
DDB1-217ENST00000540166 REXO1L1PQ8IX06 675 aa9.77□□□□□ -0.84
DDB1-217ENST00000540166 N4BP2L2Q92802 583 aaPredicted RBP9.77□□□□□ -0.84
DDB1-217ENST00000540166 FAM169AQ9Y6X4 670 aa9.77□□□□□ -0.84
DDB1-217ENST00000540166 PTPDC1A2A3K4 754 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 HMGB1P09429 215 aaKnown RBP9.77□□□□□ -0.85
DDB1-217ENST00000540166 GYG1P46976 350 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 NLRP12P59046 1061 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 SREBF2Q12772 1141 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 STIM1Q13586 685 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 TUBB2AQ13885 445 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 UBE4AQ14139 1066 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 MCMDC2Q4G0Z9 681 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 RGMBQ6NW40 437 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 CPLX2Q6PUV4 134 aaKnown RBP9.77□□□□□ -0.85
DDB1-217ENST00000540166 KCNG4Q8TDN1 519 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 TUBB2BQ9BVA1 445 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 NCOA5Q9HCD5 579 aaKnown RBP9.77□□□□□ -0.85
DDB1-217ENST00000540166 PICK1Q9NRD5 415 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 UBE2Q2LH0YL09 131 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 TRDNQ13061 729 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 ZNF589Q86UQ0 364 aaPredicted RBP9.77□□□□□ -0.85
DDB1-217ENST00000540166 C8orf76Q96K31 380 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 CD209Q9NNX6 404 aa9.77□□□□□ -0.85
DDB1-217ENST00000540166 ZEB2O60315 1214 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 LBX1P52954 281 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 WDR78Q5VTH9 848 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 PRAMEF18Q5VWM3 479 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 FBXW10Q5XX13 1052 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 ATL3Q6DD88 541 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 USP28Q96RU2 1077 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 SEC62Q99442 399 aaKnown RBP9.76□□□□□ -0.85
DDB1-217ENST00000540166 CDC23Q9UJX2 597 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 ODF2LQ9ULJ1 636 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 H7C1W4 665 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 SYKP43405 635 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 PUM3Q15397 648 aaKnown RBP9.76□□□□□ -0.85
DDB1-217ENST00000540166 RBM43Q6ZSC3 357 aaKnown RBP9.76□□□□□ -0.85
DDB1-217ENST00000540166 L3MBTL3Q96JM7 780 aaPredicted RBP9.76□□□□□ -0.85
DDB1-217ENST00000540166 GDAP1L1Q96MZ0 367 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 SCLT1Q96NL6 688 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 FTOQ9C0B1 505 aaKnown RBP eCLIP9.76□□□□□ -0.85
DDB1-217ENST00000540166 MRFAP1Q9Y605 127 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 USP54Q70EL1 1684 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 ADM5C9JUS6 153 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 N4BP1O75113 896 aaKnown RBP9.76□□□□□ -0.85
DDB1-217ENST00000540166 IL15P40933 162 aaPredicted RBP9.76□□□□□ -0.85
DDB1-217ENST00000540166 ARHGAP25P42331 645 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 VEGFBP49765 207 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 ADKP55263 362 aaKnown RBP9.76□□□□□ -0.85
DDB1-217ENST00000540166 GSTO1P78417 241 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 MAP3K9P80192 1104 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 BIRC2Q13490 618 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 TRIM29Q14134 588 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 SWT1Q5T5J6 900 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms