RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 CABP5Q9NP86 173 aa19.43■□□□□ 0.7
COPS3-212ENST00000539941 TMEM63CQ9P1W3 806 aa19.43■□□□□ 0.7
COPS3-212ENST00000539941 CNOT7Q9UIV1 285 aaKnown RBP19.43■□□□□ 0.7
COPS3-212ENST00000539941 GJA3Q9Y6H8 435 aa19.43■□□□□ 0.7
COPS3-212ENST00000539941 BTBD18B2RXH4 712 aa19.43■□□□□ 0.7
COPS3-212ENST00000539941 KRT2P35908 639 aa19.43■□□□□ 0.7
COPS3-212ENST00000539941 ZNF445P59923 1031 aa19.43■□□□□ 0.7
COPS3-212ENST00000539941 ANO1Q5XXA6 986 aa19.43■□□□□ 0.7
COPS3-212ENST00000539941 ZNF541Q9H0D2 1346 aa19.43■□□□□ 0.7
COPS3-212ENST00000539941 hCG_1642624A0A1W2PR95 340 aa19.42■□□□□ 0.7
COPS3-212ENST00000539941 USP17L5A8MUK1 530 aa19.42■□□□□ 0.7
COPS3-212ENST00000539941 CYTH3O43739 400 aa19.42■□□□□ 0.7
COPS3-212ENST00000539941 CALML3P27482 149 aa19.42■□□□□ 0.7
COPS3-212ENST00000539941 ZSCAN23Q3MJ62 389 aa19.42■□□□□ 0.7
COPS3-212ENST00000539941 GPATCH4Q5T3I0 446 aaKnown RBP19.42■□□□□ 0.7
COPS3-212ENST00000539941 USP17L2Q6R6M4 530 aa19.42■□□□□ 0.7
COPS3-212ENST00000539941 MTERF4Q7Z6M4 381 aaKnown RBP19.42■□□□□ 0.7
COPS3-212ENST00000539941 LINC00301Q8NCQ3 95 aa19.42■□□□□ 0.7
COPS3-212ENST00000539941 TRIM44Q96DX7 344 aaPredicted RBP19.42■□□□□ 0.7
COPS3-212ENST00000539941 PGAP2Q9UHJ9 254 aa19.42■□□□□ 0.7
COPS3-212ENST00000539941 MTMR7Q9Y216 660 aa19.42■□□□□ 0.7
COPS3-212ENST00000539941 CEP350Q5VT06 3117 aa19.41■□□□□ 0.7
COPS3-212ENST00000539941 SHTN1A0MZ66 631 aa19.41■□□□□ 0.7
COPS3-212ENST00000539941 SLURP2P0DP57 97 aa19.41■□□□□ 0.7
COPS3-212ENST00000539941 MAP3K10Q02779 954 aa19.41■□□□□ 0.7
COPS3-212ENST00000539941 CEBPZQ03701 1054 aaKnown RBP19.41■□□□□ 0.7
COPS3-212ENST00000539941 ICA1Q05084 483 aa19.41■□□□□ 0.7
COPS3-212ENST00000539941 STK38Q15208 465 aa19.41■□□□□ 0.7
COPS3-212ENST00000539941 SLC35G1Q2M3R5 365 aa19.41■□□□□ 0.7
COPS3-212ENST00000539941 RILPL1Q5EBL4 403 aa19.41■□□□□ 0.7
COPS3-212ENST00000539941 CLEC10AQ8IUN9 316 aa19.41■□□□□ 0.7
COPS3-212ENST00000539941 CCDC148Q8NFR7 591 aa19.41■□□□□ 0.7
COPS3-212ENST00000539941 SHISA4Q96DD7 197 aa19.41■□□□□ 0.7
COPS3-212ENST00000539941 PGBD1Q96JS3 809 aa19.41■□□□□ 0.7
COPS3-212ENST00000539941 FTOQ9C0B1 505 aaKnown RBP eCLIP19.41■□□□□ 0.7
COPS3-212ENST00000539941 RIOX1Q9H6W3 641 aa19.41■□□□□ 0.7
COPS3-212ENST00000539941 RRAGCQ9HB90 399 aa19.41■□□□□ 0.7
COPS3-212ENST00000539941 BAZ2BQ9UIF8 2168 aaKnown RBP19.41■□□□□ 0.7
COPS3-212ENST00000539941 ZC3H4Q9UPT8 1303 aaKnown RBP19.41■□□□□ 0.7
COPS3-212ENST00000539941 H7C1D1 291 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 hCG_1984214I3L0E3 225 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 GOLGA8HP0CJ92 632 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 EEF2P13639 858 aaKnown RBP19.4■□□□□ 0.7
COPS3-212ENST00000539941 ZNF543Q08ER8 600 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 SEPT2Q15019 361 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 CCDC183Q5T5S1 534 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 GALNT17Q6IS24 598 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 GPC2Q8N158 579 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 ZNF713Q8N859 430 aaPredicted RBP19.4■□□□□ 0.7
COPS3-212ENST00000539941 DCAF4Q8WV16 495 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 RRP36Q96EU6 259 aaKnown RBP19.4■□□□□ 0.7
COPS3-212ENST00000539941 TMEM39BQ9GZU3 492 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 GLTPD2A6NH11 291 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 TOMM70O94826 608 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 NLRP5P59047 1200 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 ATP2B2Q01814 1243 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 KIF4BQ2VIQ3 1234 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 CCDC12Q8WUD4 166 aaPredicted RBP19.4■□□□□ 0.7
COPS3-212ENST00000539941 CLIC4Q9Y696 253 aa19.4■□□□□ 0.7
COPS3-212ENST00000539941 SPTLC2O15270 562 aa19.39■□□□□ 0.69
COPS3-212ENST00000539941 LETM1O95202 739 aaPredicted RBP19.39■□□□□ 0.69
COPS3-212ENST00000539941 GDF11O95390 407 aa19.39■□□□□ 0.69
COPS3-212ENST00000539941 GH2P01242 217 aa19.39■□□□□ 0.69
COPS3-212ENST00000539941 SLC39A14Q15043 492 aa19.39■□□□□ 0.69
COPS3-212ENST00000539941 NPY5RQ15761 445 aa19.39■□□□□ 0.69
COPS3-212ENST00000539941 JMYQ8N9B5 988 aa19.39■□□□□ 0.69
COPS3-212ENST00000539941 GMCL1P1Q8NEA9 526 aa19.39■□□□□ 0.69
COPS3-212ENST00000539941 BARHL2Q9NY43 387 aa19.39■□□□□ 0.69
COPS3-212ENST00000539941 SEC63Q9UGP8 760 aaKnown RBP19.39■□□□□ 0.69
COPS3-212ENST00000539941 ME1P48163 572 aa19.38■□□□□ 0.69
COPS3-212ENST00000539941 NR5A1Q13285 461 aa19.38■□□□□ 0.69
COPS3-212ENST00000539941 RASA3Q14644 834 aa19.38■□□□□ 0.69
COPS3-212ENST00000539941 SF3A1Q15459 793 aaKnown RBP19.38■□□□□ 0.69
COPS3-212ENST00000539941 RASGRP2Q7LDG7 609 aa19.38■□□□□ 0.69
COPS3-212ENST00000539941 DAGLBQ8NCG7 672 aa19.38■□□□□ 0.69
COPS3-212ENST00000539941 BICD2Q8TD16 824 aa19.38■□□□□ 0.69
COPS3-212ENST00000539941 OXER1Q8TDS5 423 aa19.38■□□□□ 0.69
COPS3-212ENST00000539941 A0A1W2PQ27 194 aa19.37■□□□□ 0.69
COPS3-212ENST00000539941 A0A1W2PQ64 194 aa19.37■□□□□ 0.69
COPS3-212ENST00000539941 A0A1W2PQD8 194 aa19.37■□□□□ 0.69
COPS3-212ENST00000539941 PPP6R2O75170 966 aa19.37■□□□□ 0.69
COPS3-212ENST00000539941 EGFRP00533 1210 aa19.37■□□□□ 0.69
COPS3-212ENST00000539941 ADALQ6DHV7 355 aa19.37■□□□□ 0.69
COPS3-212ENST00000539941 SAMD7Q7Z3H4 446 aa19.37■□□□□ 0.69
COPS3-212ENST00000539941 SIAH1Q8IUQ4 282 aa19.37■□□□□ 0.69
COPS3-212ENST00000539941 PIBF1Q8WXW3 757 aa19.37■□□□□ 0.69
COPS3-212ENST00000539941 TNFRSF25Q93038 417 aa19.37■□□□□ 0.69
COPS3-212ENST00000539941 GRPEL1Q9HAV7 217 aa19.37■□□□□ 0.69
COPS3-212ENST00000539941 GPRC5DQ9NZD1 345 aa19.37■□□□□ 0.69
COPS3-212ENST00000539941 MORC2Q9Y6X9 1032 aaPredicted RBP19.37■□□□□ 0.69
COPS3-212ENST00000539941 FRMPD2Q68DX3 1309 aaPredicted RBP19.37■□□□□ 0.69
COPS3-212ENST00000539941 STXBP3O00186 592 aa19.36■□□□□ 0.69
COPS3-212ENST00000539941 RRP1BQ14684 758 aaKnown RBP19.36■□□□□ 0.69
COPS3-212ENST00000539941 TBC1D10BQ4KMP7 808 aaPredicted RBP19.36■□□□□ 0.69
COPS3-212ENST00000539941 WWC2Q6AWC2 1192 aa19.36■□□□□ 0.69
COPS3-212ENST00000539941 DDX19AQ9NUU7 478 aaKnown RBP19.36■□□□□ 0.69
COPS3-212ENST00000539941 NOL7Q9UMY1 257 aaKnown RBP19.36■□□□□ 0.69
COPS3-212ENST00000539941 PCDHA4Q9UN74 947 aa19.36■□□□□ 0.69
COPS3-212ENST00000539941 POTECB2RU33 542 aa19.36■□□□□ 0.69
COPS3-212ENST00000539941 HSPA6P17066 643 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms