RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 NYAP2Q9P242 653 aa15.19■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 STAP2Q9UGK3 403 aa15.19■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 NR2E3Q9Y5X4 410 aa15.19■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 GREB1LQ9C091 1923 aaPredicted RBP15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 TRIM6-TRIM34B2RNG4 842 aa15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 SLC3A2P08195 630 aaKnown RBP15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 TSPY3P0CV98 308 aa15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 TSPY8P0CW00 308 aa15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 PDE4BQ07343 736 aa15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 PPARAQ07869 468 aa15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 TMEM132BQ14DG7 1078 aa15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 FAM47AQ5JRC9 791 aa15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 ANKLE1Q8NAG6 615 aa15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 SHCBP1Q8NEM2 672 aa15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 CEP95Q96GE4 821 aa15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 NBPF3Q9H094 633 aa15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 ISY1Q9ULR0 285 aaKnown RBP15.18■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 F5H6K3 240 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 STRNO43815 780 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 NDUFB10O96000 172 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 IGHDP01880 384 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 HOXC6P09630 235 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 CTDSPL2Q05D32 466 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 KLRC3Q07444 240 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 AAMPQ13685 434 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 LRRC47Q8N1G4 583 aaKnown RBP15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 RILPL2Q969X0 211 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 CHMP4CQ96CF2 233 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 MROH8Q9H579 483 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 C11orf49Q9H6J7 331 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 OGDHLQ9ULD0 1010 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 PPP1R9AQ9ULJ8 1098 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 PARP14Q460N5 1801 aa15.17■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 COL11A1P12107 1806 aaPredicted RBP15.16■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 IGKV6D-41A0A0C4DH26 115 aa15.16■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 VWA5AO00534 786 aa15.16■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 FOXP2O15409 715 aa15.16■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 COBLO75128 1261 aa15.16■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 SLC4A3P48751 1232 aa15.16■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 MNX1P50219 401 aaPredicted RBP15.16■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 TFAP4Q01664 338 aa15.16■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 VPS53Q5VIR6 699 aa15.16■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 C7orf61Q8IZ16 206 aa15.16■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 FAM227BQ96M60 508 aa15.16■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 SLF1Q9BQI6 1058 aa15.16■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 MTMR4Q9NYA4 1195 aa15.16■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 A0A0D9SFI3 127 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 SLC25A27O95847 323 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 TTLL1O95922 423 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 FCER1AP12319 257 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 STAT3P40763 770 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 LHX8Q68G74 356 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 RIOX2Q8IUF8 465 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 SMC5Q8IY18 1101 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 TRPV1Q8NER1 839 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 KIFC2Q96AC6 838 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 MMP19Q99542 508 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 INCENPQ9NQS7 918 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 HELLSQ9NRZ9 838 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 SLC5A4Q9NY91 659 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 ADAMTS5Q9UNA0 930 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 CTDP1Q9Y5B0 961 aaPredicted RBP15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 SUPT16HQ9Y5B9 1047 aaKnown RBP15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 MYH4Q9Y623 1939 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 ZNF236Q9UL36 1845 aa15.15■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 TSPY2A6NKD2 308 aa15.14■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 PGK2P07205 417 aa15.14■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 NMIQ13287 307 aaPredicted RBP15.14■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 ANO1Q5XXA6 986 aa15.14■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 OLFML2BQ68BL8 750 aa15.14■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 CHD1LQ86WJ1 897 aa15.14■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 NEDD1Q8NHV4 660 aa15.14■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 TOMM22Q9NS69 142 aa15.14■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 DDX20Q9UHI6 824 aaKnown RBP15.14■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 PLIN4Q96Q06 1357 aa15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 CYBAP13498 195 aa15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 KCTD2Q14681 263 aa15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 MCMDC2Q4G0Z9 681 aa15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 PRAMEF19Q5SWL8 479 aa15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 SLFN13Q68D06 897 aa15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 SNRNP48Q6IEG0 339 aaKnown RBP15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 ABRAQ8N0Z2 381 aa15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 CPXCR1Q8N123 301 aa15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 PRPF38AQ8NAV1 312 aaKnown RBP15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 REPS2Q8NFH8 660 aa15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 MKL1Q969V6 931 aa15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 MAML3Q96JK9 1138 aa15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 RBM27Q9P2N5 1060 aaKnown RBP15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 ZNF214Q9UL59 606 aaPredicted RBP15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 ZMYND8Q9ULU4 1186 aaPredicted RBP15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 ALPK3Q96L96 1907 aa15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 PFASO15067 1338 aa15.13■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 RANBP6O60518 1105 aaKnown RBP15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 NMT2O60551 498 aa15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 ZBED4O75132 1171 aa15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 MYCNP04198 464 aaPredicted RBP15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 SYN1P17600 705 aa15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 IRX6P78412 446 aaPredicted RBP15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 NUCB1Q02818 461 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms