RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 KLRC3Q07444 240 aa13.58□□□□□ -0.24
VTN-202ENST00000539746 NTRK3Q16288 839 aa13.58□□□□□ -0.24
VTN-202ENST00000539746 MIGA2Q7L4E1 593 aa13.58□□□□□ -0.24
VTN-202ENST00000539746 CCDC144CPQ8IYA2 1237 aa13.58□□□□□ -0.24
VTN-202ENST00000539746 ZNF280CQ8ND82 737 aa13.58□□□□□ -0.24
VTN-202ENST00000539746 GTF3C2Q8WUA4 911 aaPredicted RBP13.58□□□□□ -0.24
VTN-202ENST00000539746 KLRG1Q96E93 195 aa13.58□□□□□ -0.24
VTN-202ENST00000539746 EHMT1Q9H9B1 1298 aa13.58□□□□□ -0.24
VTN-202ENST00000539746 MAD2L2Q9UI95 211 aa13.58□□□□□ -0.24
VTN-202ENST00000539746 ESYT2A0FGR8 921 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 GOLGA6L4A6NEF3 574 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 MBD3O95983 291 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 CDC27P30260 824 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 KRT2P35908 639 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 TRAPPC10P48553 1259 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 MRPL12P52815 198 aaKnown RBP13.57□□□□□ -0.24
VTN-202ENST00000539746 PPATQ06203 517 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 ORC2Q13416 577 aaPredicted RBP13.57□□□□□ -0.24
VTN-202ENST00000539746 MAP3K11Q16584 847 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 RILPL1Q5EBL4 403 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 NBPF12Q5TAG4 269 aaPredicted RBP13.57□□□□□ -0.24
VTN-202ENST00000539746 C2orf69Q8N8R5 385 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 CCDC34Q96HJ3 373 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 MYL10Q9BUA6 226 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.57□□□□□ -0.24
VTN-202ENST00000539746 RIOX1Q9H6W3 641 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
VTN-202ENST00000539746 TACC3Q9Y6A5 838 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 V9GY48 417 aaPredicted RBP13.57□□□□□ -0.24
VTN-202ENST00000539746 ADAMTSL1Q8N6G6 1762 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 MYPNQ86TC9 1320 aa13.57□□□□□ -0.24
VTN-202ENST00000539746 ZBTB5O15062 677 aa13.56□□□□□ -0.24
VTN-202ENST00000539746 EGFRP00533 1210 aa13.56□□□□□ -0.24
VTN-202ENST00000539746 MMP1P03956 469 aa13.56□□□□□ -0.24
VTN-202ENST00000539746 COPB2P35606 906 aa13.56□□□□□ -0.24
VTN-202ENST00000539746 HIRAP54198 1017 aaPredicted RBP13.56□□□□□ -0.24
VTN-202ENST00000539746 NLRP5P59047 1200 aa13.56□□□□□ -0.24
VTN-202ENST00000539746 BTNL9Q6UXG8 535 aa13.56□□□□□ -0.24
VTN-202ENST00000539746 FASTKD5Q7L8L6 764 aaKnown RBP13.56□□□□□ -0.24
VTN-202ENST00000539746 ERO1BQ86YB8 467 aa13.56□□□□□ -0.24
VTN-202ENST00000539746 LRRC47Q8N1G4 583 aaKnown RBP13.56□□□□□ -0.24
VTN-202ENST00000539746 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.56□□□□□ -0.24
VTN-202ENST00000539746 TNPO1Q92973 898 aaKnown RBP13.56□□□□□ -0.24
VTN-202ENST00000539746 CUL5Q93034 780 aa13.56□□□□□ -0.24
VTN-202ENST00000539746 SYAP1Q96A49 352 aaPredicted RBP13.56□□□□□ -0.24
VTN-202ENST00000539746 CDCA5Q96FF9 252 aa13.56□□□□□ -0.24
VTN-202ENST00000539746 AMNQ9BXJ7 453 aa13.56□□□□□ -0.24
VTN-202ENST00000539746 BARHL2Q9NY43 387 aa13.56□□□□□ -0.24
VTN-202ENST00000539746 MTMR6Q9Y217 621 aa13.56□□□□□ -0.24
VTN-202ENST00000539746 CNTNAP5Q8WYK1 1306 aa13.56□□□□□ -0.24
VTN-202ENST00000539746 CXCL11O14625 94 aa13.55□□□□□ -0.24
VTN-202ENST00000539746 JAK2O60674 1132 aa13.55□□□□□ -0.24
VTN-202ENST00000539746 CTDNEP1O95476 244 aa13.55□□□□□ -0.24
VTN-202ENST00000539746 NDUFB10O96000 172 aa13.55□□□□□ -0.24
VTN-202ENST00000539746 PTPRAP18433 802 aa13.55□□□□□ -0.24
VTN-202ENST00000539746 RXRAP19793 462 aa13.55□□□□□ -0.24
VTN-202ENST00000539746 BACE1P56817 501 aa13.55□□□□□ -0.24
VTN-202ENST00000539746 NBPF11Q86T75 865 aa13.55□□□□□ -0.24
VTN-202ENST00000539746 PRPF38AQ8NAV1 312 aaKnown RBP13.55□□□□□ -0.24
VTN-202ENST00000539746 KCNG4Q8TDN1 519 aa13.55□□□□□ -0.24
VTN-202ENST00000539746 PHKBQ93100 1093 aa13.55□□□□□ -0.24
VTN-202ENST00000539746 C12orf42Q96LP6 360 aa13.55□□□□□ -0.24
VTN-202ENST00000539746 FAM217BQ9NTX9 383 aaPredicted RBP13.55□□□□□ -0.24
VTN-202ENST00000539746 MAP3K20Q9NYL2 800 aaKnown RBP13.55□□□□□ -0.24
VTN-202ENST00000539746 RABGAP1Q9Y3P9 1069 aa13.55□□□□□ -0.24
VTN-202ENST00000539746 SHTN1A0MZ66 631 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 ZBED4O75132 1171 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 FOSP01100 380 aaPredicted RBP13.54□□□□□ -0.24
VTN-202ENST00000539746 OAZ1P54368 228 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 NAPAP54920 295 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 SYDE2Q5VT97 1194 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 KRT40Q6A162 431 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 KRT25Q7Z3Z0 450 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 HEATR3Q7Z4Q2 680 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 MCF2L2Q86YR7 1114 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 NOSTRINQ8IVI9 506 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 SRBD1Q8N5C6 995 aaKnown RBP13.54□□□□□ -0.24
VTN-202ENST00000539746 MB21D1Q8N884 522 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 DAGLBQ8NCG7 672 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 PROCA1Q8NCQ7 364 aaPredicted RBP13.54□□□□□ -0.24
VTN-202ENST00000539746 HOXC10Q9NYD6 342 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 PNMA3Q9UL41 463 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 ELP1O95163 1332 aa13.54□□□□□ -0.24
VTN-202ENST00000539746 GREB1LQ9C091 1923 aaPredicted RBP13.54□□□□□ -0.24
VTN-202ENST00000539746 CCDC194A0A1B0GVG4 234 aa13.53□□□□□ -0.24
VTN-202ENST00000539746 FAM196BA6NMK8 535 aa13.53□□□□□ -0.24
VTN-202ENST00000539746 TMEM232C9JQI7 657 aa13.53□□□□□ -0.24
VTN-202ENST00000539746 U2AF2P26368 475 aaKnown RBP eCLIP13.53□□□□□ -0.24
VTN-202ENST00000539746 ADCY7P51828 1080 aa13.53□□□□□ -0.24
VTN-202ENST00000539746 FUT2Q10981 343 aa13.53□□□□□ -0.24
VTN-202ENST00000539746 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
VTN-202ENST00000539746 CCDC82Q8N4S0 544 aa13.53□□□□□ -0.24
VTN-202ENST00000539746 SENP2Q9HC62 589 aa13.53□□□□□ -0.24
VTN-202ENST00000539746 PCDHA4Q9UN74 947 aa13.53□□□□□ -0.24
VTN-202ENST00000539746 MTMR7Q9Y216 660 aa13.53□□□□□ -0.24
VTN-202ENST00000539746 MRPL11Q9Y3B7 192 aaKnown RBP13.53□□□□□ -0.24
VTN-202ENST00000539746 USP17L15C9J2P7 530 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 USP17L13C9JLJ4 530 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 USP17L11C9JVI0 530 aa13.52□□□□□ -0.25
VTN-202ENST00000539746 USP17L18D6R9N7 530 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms