RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 CERS5Q8N5B7 392 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 TRIML1Q8N9V2 468 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 CNNM3Q8NE01 707 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 PSMD1Q99460 953 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 TRIM34Q9BYJ4 488 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 MAD2L2Q9UI95 211 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 FBXO2Q9UK22 296 aaPredicted RBP11.63□□□□□ -0.55
SPARC-209ENST00000539687 ZKSCAN5Q9Y2L8 839 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 CCDC194A0A1B0GVG4 234 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 ESYT2A0FGR8 921 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 KLRF2D3W0D1 207 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 ENTPD3O75355 529 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 CDC25BP30305 580 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 TXLNAP40222 546 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 TOB1P50616 345 aaPredicted RBP11.62□□□□□ -0.55
SPARC-209ENST00000539687 NR5A1Q13285 461 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 PICALMQ13492 652 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 GPATCH4Q5T3I0 446 aaKnown RBP11.62□□□□□ -0.55
SPARC-209ENST00000539687 PPP1R18Q6NYC8 613 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 CDC42EP5Q6NZY7 148 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 KRBA2Q6ZNG9 492 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 FOXP4Q8IVH2 680 aaPredicted RBP11.62□□□□□ -0.55
SPARC-209ENST00000539687 TTLL6Q8N841 843 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 SPDYE1Q8NFV5 336 aaPredicted RBP11.62□□□□□ -0.55
SPARC-209ENST00000539687 C7orf43Q8WVR3 580 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 TNFRSF25Q93038 417 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 GLT8D2Q9H1C3 349 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 DNAJC25Q9H1X3 360 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 ANO8Q9HCE9 1232 aaPredicted RBP11.62□□□□□ -0.55
SPARC-209ENST00000539687 C6orf50Q9HD87 102 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 BARHL2Q9NY43 387 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 MTMR4Q9NYA4 1195 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 TMOD2Q9NZR1 351 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 PI4KBQ9UBF8 816 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 TUBE1Q9UJT0 475 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 HDAC9Q9UKV0 1011 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 SYNPO2Q9UMS6 1093 aa11.62□□□□□ -0.55
SPARC-209ENST00000539687 IGKV6D-41A0A0C4DH26 115 aa11.61□□□□□ -0.55
SPARC-209ENST00000539687 F8W031 263 aaPredicted RBP11.61□□□□□ -0.55
SPARC-209ENST00000539687 SMC2O95347 1197 aa11.61□□□□□ -0.55
SPARC-209ENST00000539687 FXR2P51116 673 aaKnown RBP eCLIP11.61□□□□□ -0.55
SPARC-209ENST00000539687 SEMA3FQ13275 785 aa11.61□□□□□ -0.55
SPARC-209ENST00000539687 APOBEC3HQ6NTF7 200 aaKnown RBP11.61□□□□□ -0.55
SPARC-209ENST00000539687 OLFM4Q6UX06 510 aa11.61□□□□□ -0.55
SPARC-209ENST00000539687 KRT25Q7Z3Z0 450 aa11.61□□□□□ -0.55
SPARC-209ENST00000539687 SLC51AQ86UW1 340 aa11.61□□□□□ -0.55
SPARC-209ENST00000539687 SLC44A5Q8NCS7 719 aa11.61□□□□□ -0.55
SPARC-209ENST00000539687 CEP95Q96GE4 821 aa11.61□□□□□ -0.55
SPARC-209ENST00000539687 DBNDD1Q9H9R9 158 aa11.61□□□□□ -0.55
SPARC-209ENST00000539687 PCDHB6Q9Y5E3 794 aa11.61□□□□□ -0.55
SPARC-209ENST00000539687 UBE2Q2LH0YL09 131 aa11.6□□□□□ -0.55
SPARC-209ENST00000539687 IKBKBO14920 756 aa11.6□□□□□ -0.55
SPARC-209ENST00000539687 PPIP5K2O43314 1243 aa11.6□□□□□ -0.55
SPARC-209ENST00000539687 ZNF500O60304 480 aaPredicted RBP11.6□□□□□ -0.55
SPARC-209ENST00000539687 ZBTB7AO95365 584 aa11.6□□□□□ -0.55
SPARC-209ENST00000539687 SNHG28P0DPA3 235 aa11.6□□□□□ -0.55
SPARC-209ENST00000539687 ATP2C1P98194 919 aaPredicted RBP11.6□□□□□ -0.55
SPARC-209ENST00000539687 PLCB2Q00722 1185 aa11.6□□□□□ -0.55
SPARC-209ENST00000539687 IQCB1Q15051 598 aa11.6□□□□□ -0.55
SPARC-209ENST00000539687 SLC4A8Q2Y0W8 1093 aa11.6□□□□□ -0.55
SPARC-209ENST00000539687 LUZP1Q86V48 1076 aa11.6□□□□□ -0.55
SPARC-209ENST00000539687 TEX2Q8IWB9 1127 aa11.6□□□□□ -0.55
SPARC-209ENST00000539687 OXER1Q8TDS5 423 aa11.6□□□□□ -0.55
SPARC-209ENST00000539687 MRFAP1L1Q96HT8 127 aa11.6□□□□□ -0.55
SPARC-209ENST00000539687 ZMYND12Q9H0C1 365 aa11.6□□□□□ -0.55
SPARC-209ENST00000539687 ATRNL1Q5VV63 1379 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 STXBP3O00186 592 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 NEMFO60524 1076 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 PDHBP11177 359 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 CHRNA5P30532 468 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 LONP1P36776 959 aaKnown RBP11.59□□□□□ -0.55
SPARC-209ENST00000539687 PRPHP41219 470 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 SCNN1DP51172 638 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 RBM5P52756 815 aaKnown RBP eCLIP11.59□□□□□ -0.55
SPARC-209ENST00000539687 NAPAP54920 295 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 EVX2Q03828 476 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 NPY5RQ15761 445 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 MCTP2Q6DN12 878 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 PIK3AP1Q6ZUJ8 805 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 HEATR3Q7Z4Q2 680 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 NAP1L4Q99733 375 aaKnown RBP11.59□□□□□ -0.55
SPARC-209ENST00000539687 TRIM5Q9C035 493 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 PDGFDQ9GZP0 370 aaPredicted RBP11.59□□□□□ -0.55
SPARC-209ENST00000539687 RIOX1Q9H6W3 641 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 KANSL2Q9H9L4 492 aa11.59□□□□□ -0.55
SPARC-209ENST00000539687 SLX4Q8IY92 1834 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 SHMT1P34896 483 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 ZNF75DP51815 510 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 TGFB2P61812 414 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 TRAF1Q13077 416 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 POSTNQ15063 836 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 NT5DC1Q5TFE4 455 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 WWC2Q6AWC2 1192 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 TMEM179Q6ZVK1 233 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 PLA2G4DQ86XP0 818 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 KIAA0825Q8IV33 1275 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 STAG2Q8N3U4 1231 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 OGFOD1Q8N543 542 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 IQUBQ8NA54 791 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 MLKLQ8NB16 471 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms