RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 STX10O60499 249 aa15.95■□□□□ 0.14
UBE3B-210ENST00000539599 FGRP09769 529 aa15.95■□□□□ 0.14
UBE3B-210ENST00000539599 PMS1P54277 932 aaKnown RBP15.95■□□□□ 0.14
UBE3B-210ENST00000539599 PDXDC2PQ6P474 469 aa15.95■□□□□ 0.14
UBE3B-210ENST00000539599 ZNF771Q7L3S4 317 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-210ENST00000539599 TGFBRAP1Q8WUH2 860 aa15.95■□□□□ 0.14
UBE3B-210ENST00000539599 ANKIB1Q9P2G1 1089 aa15.95■□□□□ 0.14
UBE3B-210ENST00000539599 STX8Q9UNK0 236 aa15.95■□□□□ 0.14
UBE3B-210ENST00000539599 FHOD1Q9Y613 1164 aa15.95■□□□□ 0.14
UBE3B-210ENST00000539599 CYTH3O43739 400 aa15.94■□□□□ 0.14
UBE3B-210ENST00000539599 DDAH1O94760 285 aa15.94■□□□□ 0.14
UBE3B-210ENST00000539599 USP5P45974 858 aa15.94■□□□□ 0.14
UBE3B-210ENST00000539599 KRT31Q15323 416 aa15.94■□□□□ 0.14
UBE3B-210ENST00000539599 PFKFB3Q16875 520 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-210ENST00000539599 INF2Q27J81 1249 aa15.94■□□□□ 0.14
UBE3B-210ENST00000539599 KANK3Q6NY19 840 aa15.94■□□□□ 0.14
UBE3B-210ENST00000539599 CLEC4GQ6UXB4 293 aa15.94■□□□□ 0.14
UBE3B-210ENST00000539599 TRIML1Q8N9V2 468 aa15.94■□□□□ 0.14
UBE3B-210ENST00000539599 PNMA1Q8ND90 353 aa15.94■□□□□ 0.14
UBE3B-210ENST00000539599 C8orf37Q96NL8 207 aa15.94■□□□□ 0.14
UBE3B-210ENST00000539599 PUF60Q9UHX1 559 aaKnown RBP15.94■□□□□ 0.14
UBE3B-210ENST00000539599 NKRFO15226 690 aaKnown RBP eCLIP15.94■□□□□ 0.14
UBE3B-210ENST00000539599 ERCC5P28715 1186 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-210ENST00000539599 RCAN1P53805 252 aa15.94■□□□□ 0.14
UBE3B-210ENST00000539599 CDKAL1Q5VV42 579 aa15.94■□□□□ 0.14
UBE3B-210ENST00000539599 HEATR3Q7Z4Q2 680 aa15.94■□□□□ 0.14
UBE3B-210ENST00000539599 KRT222Q8N1A0 295 aa15.94■□□□□ 0.14
UBE3B-210ENST00000539599 PES1O00541 588 aaKnown RBP15.93■□□□□ 0.14
UBE3B-210ENST00000539599 LAMB2P55268 1798 aa15.93■□□□□ 0.14
UBE3B-210ENST00000539599 ELOA2Q8IYF1 753 aaPredicted RBP15.93■□□□□ 0.14
UBE3B-210ENST00000539599 MTA3Q9BTC8 594 aa15.93■□□□□ 0.14
UBE3B-210ENST00000539599 KAT14Q9H8E8 782 aa15.93■□□□□ 0.14
UBE3B-210ENST00000539599 MYH8P13535 1937 aa15.93■□□□□ 0.14
UBE3B-210ENST00000539599 TM4SF1P30408 202 aa15.93■□□□□ 0.14
UBE3B-210ENST00000539599 PPP2R3AQ06190 1150 aa15.93■□□□□ 0.14
UBE3B-210ENST00000539599 PPFIBP1Q86W92 1011 aa15.93■□□□□ 0.14
UBE3B-210ENST00000539599 RASSF8Q8NHQ8 419 aa15.93■□□□□ 0.14
UBE3B-210ENST00000539599 FERMT2Q96AC1 680 aa15.93■□□□□ 0.14
UBE3B-210ENST00000539599 ERVK-24P63145 666 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 DHX8Q14562 1220 aaKnown RBP15.92■□□□□ 0.14
UBE3B-210ENST00000539599 WWC2Q6AWC2 1192 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 NELFBQ8WX92 580 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 CCDC34Q96HJ3 373 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 VAT1LQ9HCJ6 419 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 TRIM10Q9UDY6 481 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 ADGRG1Q9Y653 693 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 N4BP3O15049 544 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 ORC4O43929 436 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 SASH3O75995 380 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 PNMA6AP0CW24 399 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-210ENST00000539599 PBX1P40424 430 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 PRCPP42785 496 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 BLIDQ8IZY5 108 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 CDCA7Q9BWT1 371 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-210ENST00000539599 MKNK2Q9HBH9 465 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 ERICH4A6NGS2 130 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 MFAP3LO75121 409 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 ZPR1O75312 459 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 CALM1P0DP23 149 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 CALM2P0DP24 149 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 CALM3P0DP25 149 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 C4orf32Q8N8J7 132 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 ARHGEF1Q92888 912 aaKnown RBP15.92■□□□□ 0.14
UBE3B-210ENST00000539599 HPS3Q969F9 1004 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 GSDMAQ96QA5 445 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 UIMC1Q96RL1 719 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 MRFAP1Q9Y605 127 aa15.92■□□□□ 0.14
UBE3B-210ENST00000539599 UTRNP46939 3433 aa15.91■□□□□ 0.14
UBE3B-210ENST00000539599 PLA2G4AP47712 749 aa15.91■□□□□ 0.14
UBE3B-210ENST00000539599 NAALADL2Q58DX5 795 aa15.91■□□□□ 0.14
UBE3B-210ENST00000539599 IQUBQ8NA54 791 aa15.91■□□□□ 0.14
UBE3B-210ENST00000539599 SMARCC1Q92922 1105 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-210ENST00000539599 MAD2L2Q9UI95 211 aa15.91■□□□□ 0.14
UBE3B-210ENST00000539599 THRAP3Q9Y2W1 955 aaKnown RBP15.91■□□□□ 0.14
UBE3B-210ENST00000539599 POLR3GO15318 223 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-210ENST00000539599 CCP110O43303 1012 aa15.91■□□□□ 0.14
UBE3B-210ENST00000539599 SLURP2P0DP57 97 aa15.91■□□□□ 0.14
UBE3B-210ENST00000539599 ERCC3P19447 782 aa15.91■□□□□ 0.14
UBE3B-210ENST00000539599 MAP3K9P80192 1104 aa15.91■□□□□ 0.14
UBE3B-210ENST00000539599 CHP1Q99653 195 aa15.91■□□□□ 0.14
UBE3B-210ENST00000539599 ZCCHC17Q9NP64 241 aaKnown RBP15.91■□□□□ 0.14
UBE3B-210ENST00000539599 NRAPQ86VF7 1730 aa15.9■□□□□ 0.14
UBE3B-210ENST00000539599 RREB1Q92766 1687 aa15.9■□□□□ 0.14
UBE3B-210ENST00000539599 RPN1P04843 607 aaKnown RBP15.9■□□□□ 0.14
UBE3B-210ENST00000539599 STAT6P42226 847 aa15.9■□□□□ 0.14
UBE3B-210ENST00000539599 ZNF569Q5MCW4 686 aa15.9■□□□□ 0.14
UBE3B-210ENST00000539599 UTP14CQ5TAP6 766 aaKnown RBP15.9■□□□□ 0.14
UBE3B-210ENST00000539599 C12orf60Q5U649 245 aa15.9■□□□□ 0.14
UBE3B-210ENST00000539599 CLEC10AQ8IUN9 316 aa15.9■□□□□ 0.14
UBE3B-210ENST00000539599 ATP8A2Q9NTI2 1148 aa15.9■□□□□ 0.14
UBE3B-210ENST00000539599 ARPP21Q9UBL0 812 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-210ENST00000539599 CCDC175P0C221 793 aa15.9■□□□□ 0.14
UBE3B-210ENST00000539599 TSPY3P0CV98 308 aa15.9■□□□□ 0.14
UBE3B-210ENST00000539599 TSPY8P0CW00 308 aa15.9■□□□□ 0.14
UBE3B-210ENST00000539599 PPP2R5BQ15173 497 aa15.9■□□□□ 0.14
UBE3B-210ENST00000539599 NUP88Q99567 741 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-210ENST00000539599 SLF1Q9BQI6 1058 aa15.9■□□□□ 0.14
UBE3B-210ENST00000539599 GTPBP4Q9BZE4 634 aaKnown RBP15.9■□□□□ 0.14
UBE3B-210ENST00000539599 NARFQ9UHQ1 456 aa15.9■□□□□ 0.14
UBE3B-210ENST00000539599 PCDHA6Q9UN73 950 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms