RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 GOLGA6L19H0YKK7 550 aa23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 ENTPD3O75355 529 aa23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 ZRSR1Q15695 479 aaKnown RBP23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 C11orf57Q6ZUT1 292 aaPredicted RBP23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 NAT10Q9H0A0 1025 aaKnown RBP23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 ATRNL1Q5VV63 1379 aa23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 IGKV6D-41A0A0C4DH26 115 aa23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 FAM237AA0A1B0GTK4 181 aa23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 GOLGA6L6A8MZA4 724 aa23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 FZD9O00144 591 aa23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 SYKP43405 635 aa23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 TOB1P50616 345 aaPredicted RBP23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 IQCB1Q15051 598 aa23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 RESP18Q5W5W9 173 aa23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 SHC4Q6S5L8 630 aa23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 HPSEQ9Y251 543 aa23.25■■□□□ 1.31
PACSIN3-211ENST00000539589 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.24■■□□□ 1.31
PACSIN3-211ENST00000539589 NR5A1Q13285 461 aa23.24■■□□□ 1.31
PACSIN3-211ENST00000539589 TNIP1Q15025 636 aa23.24■■□□□ 1.31
PACSIN3-211ENST00000539589 SPDYE2Q495Y8 402 aa23.24■■□□□ 1.31
PACSIN3-211ENST00000539589 ZSCAN29Q8IWY8 852 aaPredicted RBP23.24■■□□□ 1.31
PACSIN3-211ENST00000539589 CEP57L1Q8IYX8 460 aa23.24■■□□□ 1.31
PACSIN3-211ENST00000539589 SRBD1Q8N5C6 995 aaKnown RBP23.24■■□□□ 1.31
PACSIN3-211ENST00000539589 KRI1Q8N9T8 703 aaKnown RBP23.24■■□□□ 1.31
PACSIN3-211ENST00000539589 PI4KBQ9UBF8 816 aa23.24■■□□□ 1.31
PACSIN3-211ENST00000539589 MYH4Q9Y623 1939 aa23.24■■□□□ 1.31
PACSIN3-211ENST00000539589 TCP10L2B9ZVM9 353 aa23.23■■□□□ 1.31
PACSIN3-211ENST00000539589 TPM3P06753 285 aa23.23■■□□□ 1.31
PACSIN3-211ENST00000539589 RASGRP2Q7LDG7 609 aa23.23■■□□□ 1.31
PACSIN3-211ENST00000539589 VPS54Q9P1Q0 977 aa23.23■■□□□ 1.31
PACSIN3-211ENST00000539589 CEP131Q9UPN4 1083 aa23.23■■□□□ 1.31
PACSIN3-211ENST00000539589 CNTNAP1P78357 1384 aa23.23■■□□□ 1.31
PACSIN3-211ENST00000539589 COL2A1P02458 1487 aaPredicted RBP23.23■■□□□ 1.31
PACSIN3-211ENST00000539589 KIF5BP33176 963 aa23.23■■□□□ 1.31
PACSIN3-211ENST00000539589 CLEC10AQ8IUN9 316 aa23.23■■□□□ 1.31
PACSIN3-211ENST00000539589 OXER1Q8TDS5 423 aa23.23■■□□□ 1.31
PACSIN3-211ENST00000539589 PHF20Q9BVI0 1012 aa23.23■■□□□ 1.31
PACSIN3-211ENST00000539589 BECN2A8MW95 431 aa23.22■■□□□ 1.31
PACSIN3-211ENST00000539589 KRT2P35908 639 aa23.22■■□□□ 1.31
PACSIN3-211ENST00000539589 SHROOM1Q2M3G4 852 aaPredicted RBP23.22■■□□□ 1.31
PACSIN3-211ENST00000539589 NBPF9Q3BBW0 867 aa23.22■■□□□ 1.31
PACSIN3-211ENST00000539589 METTL16Q86W50 562 aaKnown RBP23.22■■□□□ 1.31
PACSIN3-211ENST00000539589 STAG2Q8N3U4 1231 aa23.22■■□□□ 1.31
PACSIN3-211ENST00000539589 ERCC4Q92889 916 aaPredicted RBP23.22■■□□□ 1.31
PACSIN3-211ENST00000539589 SHISA4Q96DD7 197 aa23.22■■□□□ 1.31
PACSIN3-211ENST00000539589 TRIM5Q9C035 493 aa23.22■■□□□ 1.31
PACSIN3-211ENST00000539589 BRMS1Q9HCU9 246 aa23.22■■□□□ 1.31
PACSIN3-211ENST00000539589 MTMR4Q9NYA4 1195 aa23.22■■□□□ 1.31
PACSIN3-211ENST00000539589 CNTNAP5Q8WYK1 1306 aa23.22■■□□□ 1.31
PACSIN3-211ENST00000539589 hCG_1642624A0A1W2PR95 340 aa23.21■■□□□ 1.31
PACSIN3-211ENST00000539589 WNT10BO00744 389 aa23.21■■□□□ 1.31
PACSIN3-211ENST00000539589 EGFRP00533 1210 aa23.21■■□□□ 1.31
PACSIN3-211ENST00000539589 GRM4Q14833 912 aa23.21■■□□□ 1.31
PACSIN3-211ENST00000539589 CLIC6Q96NY7 704 aa23.21■■□□□ 1.31
PACSIN3-211ENST00000539589 CABP5Q9NP86 173 aa23.21■■□□□ 1.31
PACSIN3-211ENST00000539589 MYOZ2Q9NPC6 264 aa23.21■■□□□ 1.31
PACSIN3-211ENST00000539589 MAD2L2Q9UI95 211 aa23.21■■□□□ 1.31
PACSIN3-211ENST00000539589 ZNF541Q9H0D2 1346 aa23.2■■□□□ 1.31
PACSIN3-211ENST00000539589 ZNF75DP51815 510 aa23.2■■□□□ 1.3
PACSIN3-211ENST00000539589 ZNF280AP59817 542 aaPredicted RBP23.2■■□□□ 1.3
PACSIN3-211ENST00000539589 SLC35G1Q2M3R5 365 aa23.2■■□□□ 1.3
PACSIN3-211ENST00000539589 PLA2G4DQ86XP0 818 aa23.2■■□□□ 1.3
PACSIN3-211ENST00000539589 FOXP4Q8IVH2 680 aaPredicted RBP23.2■■□□□ 1.3
PACSIN3-211ENST00000539589 SYT17Q9BSW7 474 aa23.2■■□□□ 1.3
PACSIN3-211ENST00000539589 TOP1P11387 765 aaKnown RBP23.2■■□□□ 1.3
PACSIN3-211ENST00000539589 GMPSP49915 693 aaPredicted RBP23.2■■□□□ 1.3
PACSIN3-211ENST00000539589 TATDN1Q6P1N9 297 aa23.2■■□□□ 1.3
PACSIN3-211ENST00000539589 ARHGAP27Q6ZUM4 889 aa23.2■■□□□ 1.3
PACSIN3-211ENST00000539589 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.2■■□□□ 1.3
PACSIN3-211ENST00000539589 SPC24Q8NBT2 197 aa23.2■■□□□ 1.3
PACSIN3-211ENST00000539589 TMOD2Q9NZR1 351 aa23.2■■□□□ 1.3
PACSIN3-211ENST00000539589 MTMR7Q9Y216 660 aa23.2■■□□□ 1.3
PACSIN3-211ENST00000539589 PTPREP23469 700 aa23.19■■□□□ 1.3
PACSIN3-211ENST00000539589 RPS12P25398 132 aaKnown RBP23.19■■□□□ 1.3
PACSIN3-211ENST00000539589 EIF6P56537 245 aaKnown RBP23.19■■□□□ 1.3
PACSIN3-211ENST00000539589 CDAN1Q8IWY9 1227 aa23.19■■□□□ 1.3
PACSIN3-211ENST00000539589 FAM151AQ8WW52 585 aa23.19■■□□□ 1.3
PACSIN3-211ENST00000539589 VEZTQ9HBM0 779 aa23.19■■□□□ 1.3
PACSIN3-211ENST00000539589 KCNH3Q9ULD8 1083 aa23.19■■□□□ 1.3
PACSIN3-211ENST00000539589 PCDHB6Q9Y5E3 794 aa23.19■■□□□ 1.3
PACSIN3-211ENST00000539589 GJA3Q9Y6H8 435 aa23.19■■□□□ 1.3
PACSIN3-211ENST00000539589 SARM1Q6SZW1 724 aa23.18■■□□□ 1.3
PACSIN3-211ENST00000539589 DHX40Q8IX18 779 aaKnown RBP23.18■■□□□ 1.3
PACSIN3-211ENST00000539589 ZNF830Q96NB3 372 aaPredicted RBP23.18■■□□□ 1.3
PACSIN3-211ENST00000539589 CSRNP1Q96S65 589 aa23.18■■□□□ 1.3
PACSIN3-211ENST00000539589 TTC12Q9H892 705 aaPredicted RBP23.18■■□□□ 1.3
PACSIN3-211ENST00000539589 FBXO2Q9UK22 296 aaPredicted RBP23.18■■□□□ 1.3
PACSIN3-211ENST00000539589 A0A087WWV3 80 aa23.18■■□□□ 1.3
PACSIN3-211ENST00000539589 PALM3A6NDB9 673 aaPredicted RBP23.18■■□□□ 1.3
PACSIN3-211ENST00000539589 OFD1O75665 1012 aa23.18■■□□□ 1.3
PACSIN3-211ENST00000539589 RRP1BQ14684 758 aaKnown RBP23.18■■□□□ 1.3
PACSIN3-211ENST00000539589 ZNF579Q8NAF0 562 aaKnown RBP23.18■■□□□ 1.3
PACSIN3-211ENST00000539589 FAM13BQ9NYF5 915 aa23.18■■□□□ 1.3
PACSIN3-211ENST00000539589 SCG2P13521 617 aa23.17■■□□□ 1.3
PACSIN3-211ENST00000539589 VEGFAP15692 232 aaPredicted RBP23.17■■□□□ 1.3
PACSIN3-211ENST00000539589 NLRP12P59046 1061 aa23.17■■□□□ 1.3
PACSIN3-211ENST00000539589 FKBP1CQ5VVH2 108 aa23.17■■□□□ 1.3
PACSIN3-211ENST00000539589 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.17■■□□□ 1.3
PACSIN3-211ENST00000539589 CCDC17Q96LX7 622 aa23.17■■□□□ 1.3
PACSIN3-211ENST00000539589 MORC2Q9Y6X9 1032 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms