RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ARHGAP25P42331 645 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 KCNJ12Q14500 433 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 KCNB1Q14721 858 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 MAP9Q49MG5 647 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 MIGA1Q8NAN2 632 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 OR8K1Q8NGG5 319 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 RIOK1Q9BRS2 568 aaKnown RBP14.95□□□□□ -0.02
UBE3B-209ENST00000539584 ZCCHC17Q9NP64 241 aaKnown RBP14.95□□□□□ -0.02
UBE3B-209ENST00000539584 SH3GLB2Q9NR46 395 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 DUOX1Q9NRD9 1551 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 KRT9P35527 623 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 PPP1R2P41236 205 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 EIF5P55010 431 aaKnown RBP14.94□□□□□ -0.02
UBE3B-209ENST00000539584 ERVK-24P63145 666 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 KRT83P78385 493 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 AMPD2Q01433 879 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 ZNF174Q15697 407 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 NPY5RQ15761 445 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 EARS2Q5JPH6 523 aaKnown RBP14.94□□□□□ -0.02
UBE3B-209ENST00000539584 LEKR1Q6ZMV7 388 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 RETREG2Q8NC44 543 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 NEK11Q8NG66 645 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 SHISA4Q96DD7 197 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 IQCDQ96DY2 449 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 SLC4A9Q96Q91 983 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 EPN1Q9Y6I3 576 aaPredicted RBP14.94□□□□□ -0.02
UBE3B-209ENST00000539584 ABCA3Q99758 1704 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 MYH6P13533 1939 aa14.94□□□□□ -0.02
UBE3B-209ENST00000539584 STIM1Q13586 685 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 UBE4AQ14139 1066 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 SUSD4Q5VX71 490 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 WWC2Q6AWC2 1192 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 NELFBQ8WX92 580 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 NUP58Q9BVL2 599 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 THAP9Q9H5L6 903 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 ITGB4P16144 1822 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 CNTNAP5Q8WYK1 1306 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 TARSL2A2RTX5 802 aaKnown RBP14.93□□□□□ -0.02
UBE3B-209ENST00000539584 NDUFA10O95299 355 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 RPN1P04843 607 aaKnown RBP14.93□□□□□ -0.02
UBE3B-209ENST00000539584 SCG2P13521 617 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 KIF5BP33176 963 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 CCT6AP40227 531 aaKnown RBP14.93□□□□□ -0.02
UBE3B-209ENST00000539584 RAD51AP2Q09MP3 1159 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 PFKFB3Q16875 520 aaPredicted RBP14.93□□□□□ -0.02
UBE3B-209ENST00000539584 PNKPQ96T60 521 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 DNAJC7Q99615 494 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 MAGEF1Q9HAY2 307 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 PDE11AQ9HCR9 933 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 ABCB6Q9NP58 842 aa14.93□□□□□ -0.02
UBE3B-209ENST00000539584 FAM205CA6NFA0 338 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 H3BQF6 201 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 NLRP5P59047 1200 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 CHRNDQ07001 517 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 CKAP4Q07065 602 aaKnown RBP14.92□□□□□ -0.02
UBE3B-209ENST00000539584 MCM6Q14566 821 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 CASP8Q14790 479 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 ACRBPQ8NEB7 543 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 SDR42E1Q8WUS8 393 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 ZSWIM4Q9H7M6 989 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 MKRN1Q9UHC7 482 aaKnown RBP14.92□□□□□ -0.02
UBE3B-209ENST00000539584 CAPN11Q9UMQ6 739 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 LUC7L2Q9Y383 392 aaKnown RBP14.92□□□□□ -0.02
UBE3B-209ENST00000539584 DLEC1Q9Y238 1755 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.92□□□□□ -0.02
UBE3B-209ENST00000539584 PDS5AQ29RF7 1337 aaKnown RBP14.92□□□□□ -0.02
UBE3B-209ENST00000539584 LGALS16A8MUM7 142 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 LAD1O00515 517 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 ZBTB22O15209 634 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 PLEKHA8P1O95397 391 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 LMAN1P49257 510 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 UBXN1Q04323 297 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 GALNT17Q6IS24 598 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 TRAPPC11Q7Z392 1133 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 SMYD4Q8IYR2 804 aaPredicted RBP14.92□□□□□ -0.02
UBE3B-209ENST00000539584 ADSSL1Q8N142 457 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 VPS16Q9H269 839 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 CUEDC2Q9H467 287 aa14.92□□□□□ -0.02
UBE3B-209ENST00000539584 RREB1Q92766 1687 aa14.91□□□□□ -0.02
UBE3B-209ENST00000539584 DNM2P50570 870 aa14.91□□□□□ -0.02
UBE3B-209ENST00000539584 CAVIN4Q5BKX8 364 aa14.91□□□□□ -0.02
UBE3B-209ENST00000539584 PAPD7Q5XG87 772 aaKnown RBP14.91□□□□□ -0.02
UBE3B-209ENST00000539584 CCDC170Q8IYT3 715 aa14.91□□□□□ -0.02
UBE3B-209ENST00000539584 MB21D1Q8N884 522 aa14.91□□□□□ -0.02
UBE3B-209ENST00000539584 RUBCNQ92622 972 aa14.91□□□□□ -0.02
UBE3B-209ENST00000539584 TMEM51Q9NW97 253 aa14.91□□□□□ -0.02
UBE3B-209ENST00000539584 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.91□□□□□ -0.02
UBE3B-209ENST00000539584 NHSL1Q5SYE7 1610 aa14.91□□□□□ -0.02
UBE3B-209ENST00000539584 ANO9A1A5B4 782 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 KRT86O43790 486 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 PRDM1O75626 825 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 CYLC1P35663 651 aaPredicted RBP14.9□□□□□ -0.02
UBE3B-209ENST00000539584 AARSP49588 968 aaKnown RBP eCLIP14.9□□□□□ -0.02
UBE3B-209ENST00000539584 VSNL1P62760 191 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 IQCEQ6IPM2 695 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 ATP8A2Q9NTI2 1148 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 VPS18Q9P253 973 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 SLAIN2Q9P270 581 aa14.9□□□□□ -0.02
UBE3B-209ENST00000539584 MAGEC2Q9UBF1 373 aaPredicted RBP14.9□□□□□ -0.02
UBE3B-209ENST00000539584 ABCF2Q9UG63 623 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms