RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 BIRC2Q13490 618 aa4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 PLEKHG4Q58EX7 1191 aa4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 NBPF6Q5VWK0 638 aa4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 FMNL3Q8IVF7 1028 aa4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 SMYD4Q8IYR2 804 aaPredicted RBP4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 PNISRQ8TF01 805 aaKnown RBP4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 MKL1Q969V6 931 aa4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 NBPF4Q96M43 638 aa4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 NRSN2Q9GZP1 204 aa4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 DNAJC25Q9H1X3 360 aa4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 GSX1Q9H4S2 264 aaPredicted RBP4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 PPP4R2Q9NY27 417 aa4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 GGT7Q9UJ14 662 aa4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 WWC3Q9ULE0 1092 aa4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 CTNND2Q9UQB3 1225 aa4.97□□□□□ -1.61
AC055720.1-201ENST00000539552 STRCP1A6NGW2 1772 aa4.96□□□□□ -1.61
AC055720.1-201ENST00000539552 WIZO95785 1651 aa4.96□□□□□ -1.61
AC055720.1-201ENST00000539552 METTL12A8MUP2 240 aa4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 CPNE3O75131 537 aaKnown RBP4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 PDGFRBP09619 1106 aa4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 SERINC3Q13530 473 aa4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 CLEC4GQ6UXB4 293 aa4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 ATG14Q6ZNE5 492 aa4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 CKAP2LQ8IYA6 745 aa4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 GJD3Q8N144 294 aa4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 JDP2Q8WYK2 163 aa4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 RPS6KC1Q96S38 1066 aa4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 KRTAP17-1Q9BYP8 105 aa4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 EPB41L4BQ9H329 900 aa4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 GGNBP2Q9H3C7 697 aa4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 DCP1AQ9NPI6 582 aaPredicted RBP4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 GTF2IRD1Q9UHL9 959 aa4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 DDX41Q9UJV9 622 aaKnown RBP4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 SYNGAP1Q96PV0 1343 aa4.96□□□□□ -1.62
AC055720.1-201ENST00000539552 FGD5Q6ZNL6 1462 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 TNFRSF21O75509 655 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 CTSBP07858 339 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 OXCT1P55809 520 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 AMPD3Q01432 767 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 ID3Q02535 119 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 AP3B2Q13367 1082 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 BORCS6Q96GS4 357 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 CCDC120Q96HB5 630 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 C8orf48Q96LL4 319 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 WDR18Q9BV38 432 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 ZCCHC4Q9H5U6 513 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 PCOLCE2Q9UKZ9 415 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 ZNF142P52746 1687 aaPredicted RBP4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 CHD4Q14839 1912 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 VWDEQ8N2E2 1590 aa4.95□□□□□ -1.62
AC055720.1-201ENST00000539552 FANCAO15360 1455 aa4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 TCOF1Q13428 1488 aaKnown RBP4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 GNAT3A8MTJ3 354 aa4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 EIF1AYO14602 144 aaKnown RBP4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 SSBP05455 408 aaKnown RBP eCLIP4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 ZNF423Q2M1K9 1284 aa4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 ERICH6BQ5W0A0 696 aa4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 CCSAPQ6IQ19 270 aaPredicted RBP4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 PRPF38AQ8NAV1 312 aaKnown RBP4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 RNPC3Q96LT9 517 aaKnown RBP4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 SLKQ9H2G2 1235 aaPredicted RBP4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 LIN7BQ9HAP6 207 aa4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 GNL3LQ9NVN8 582 aaKnown RBP4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 PNMA2Q9UL42 364 aa4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 PPP1R9AQ9ULJ8 1098 aa4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 R3HCC1Q9Y3T6 440 aaKnown RBP4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 RICTORQ6R327 1708 aa4.94□□□□□ -1.62
AC055720.1-201ENST00000539552 TMPRSS2O15393 492 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 VIL1P09327 827 aaKnown RBP4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 RAC2P15153 192 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 HOXA5P20719 270 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 GJA8P48165 433 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 CEBPAP49715 358 aaPredicted RBP4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 RACK1P63244 317 aaKnown RBP4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 FOXD4Q12950 439 aaPredicted RBP4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 TAF1CQ15572 869 aaPredicted RBP4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 ODR4Q5SWX8 454 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 FYB2Q5VWT5 728 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 DIEXFQ68CQ4 756 aaKnown RBP4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 C11orf96Q7Z7L8 435 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 TOP6BLQ8N6T0 577 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 SCYL1Q96KG9 808 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 NAP1L5Q96NT1 182 aaPredicted RBP4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 SENP7Q9BQF6 1050 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 DUSP23Q9BVJ7 150 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 SRCIN1Q9C0H9 1055 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 C12orf49Q9H741 205 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 LATS2Q9NRM7 1088 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 RNF19AQ9NV58 838 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 FAM8A1Q9UBU6 413 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 KIAA1210Q9ULL0 1709 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 PLAGL2Q9UPG8 496 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 COMMD10Q9Y6G5 202 aa4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 XIRP1Q702N8 1843 aaKnown RBP4.93□□□□□ -1.62
AC055720.1-201ENST00000539552 KDM5BQ9UGL1 1544 aa4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 CD109Q6YHK3 1445 aa4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.92□□□□□ -1.62
AC055720.1-201ENST00000539552 LEFTY1O75610 366 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms