RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 NLRC4Q9NPP4 1024 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 GOLGA6CA6NDK9 693 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 BBOX1O75936 387 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 GOLGA6DP0CG33 693 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 ADORA1P30542 326 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 TCP10Q12799 353 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 ERCC6LQ2NKX8 1250 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 LRRC8AQ8IWT6 810 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 ZSCAN10Q96SZ4 725 aaPredicted RBP16.14■□□□□ 0.17
CACNB1-206ENST00000539338 PLEKHA4Q9H4M7 779 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 GOLGA6AQ9NYA3 693 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 SAMD15Q9P1V8 674 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 PNMA2Q9UL42 364 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 PYCARDQ9ULZ3 195 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 CEP83Q9Y592 693 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 AATKQ6ZMQ8 1374 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 CEP104O60308 925 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 REXO1Q8N1G1 1221 aaKnown RBP16.14■□□□□ 0.17
CACNB1-206ENST00000539338 PLCD3Q8N3E9 789 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 OAS2P29728 719 aaKnown RBP16.14■□□□□ 0.17
CACNB1-206ENST00000539338 ELMSAN1Q6PJG2 1045 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 FNBP1Q96RU3 617 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 TNKSO95271 1327 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 GADL1Q6ZQY3 521 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 RRAGAQ7L523 313 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 COPRSQ9NQ92 184 aa16.14■□□□□ 0.17
CACNB1-206ENST00000539338 SMCO2A6NFE2 343 aa16.13■□□□□ 0.17
CACNB1-206ENST00000539338 CYP21A2P08686 494 aa16.13■□□□□ 0.17
CACNB1-206ENST00000539338 KLHL30Q0D2K2 578 aa16.13■□□□□ 0.17
CACNB1-206ENST00000539338 NRBP1Q9UHY1 535 aa16.13■□□□□ 0.17
CACNB1-206ENST00000539338 ANKARQ7Z5J8 1434 aa16.13■□□□□ 0.17
CACNB1-206ENST00000539338 ARHGEF35A5YM69 484 aa16.13■□□□□ 0.17
CACNB1-206ENST00000539338 ZBTB38Q8NAP3 1195 aaPredicted RBP16.13■□□□□ 0.17
CACNB1-206ENST00000539338 TEKT1Q969V4 418 aa16.13■□□□□ 0.17
CACNB1-206ENST00000539338 ZNF215Q9UL58 517 aaPredicted RBP16.13■□□□□ 0.17
CACNB1-206ENST00000539338 SPOUT1Q5T280 376 aaKnown RBP16.13■□□□□ 0.17
CACNB1-206ENST00000539338 ZNF354CQ86Y25 554 aa16.13■□□□□ 0.17
CACNB1-206ENST00000539338 FMNL3Q8IVF7 1028 aa16.13■□□□□ 0.17
CACNB1-206ENST00000539338 IFT20Q8IY31 132 aa16.13■□□□□ 0.17
CACNB1-206ENST00000539338 NDUFAB1O14561 156 aa16.13■□□□□ 0.17
CACNB1-206ENST00000539338 RPS8P62241 208 aaKnown RBP16.13■□□□□ 0.17
CACNB1-206ENST00000539338 MTIF3Q9H2K0 278 aaKnown RBP16.13■□□□□ 0.17
CACNB1-206ENST00000539338 DNM3Q9UQ16 869 aa16.13■□□□□ 0.17
CACNB1-206ENST00000539338 KCNJ18B7U540 433 aa16.12■□□□□ 0.17
CACNB1-206ENST00000539338 VIMP08670 466 aaKnown RBP16.12■□□□□ 0.17
CACNB1-206ENST00000539338 KCNJ12Q14500 433 aa16.12■□□□□ 0.17
CACNB1-206ENST00000539338 WDR44Q5JSH3 913 aa16.12■□□□□ 0.17
CACNB1-206ENST00000539338 LZTS2Q9BRK4 669 aa16.12■□□□□ 0.17
CACNB1-206ENST00000539338 FERP16591 822 aa16.12■□□□□ 0.17
CACNB1-206ENST00000539338 NAP1L3Q99457 506 aaPredicted RBP16.12■□□□□ 0.17
CACNB1-206ENST00000539338 WDR70Q9NW82 654 aa16.12■□□□□ 0.17
CACNB1-206ENST00000539338 PNMA3Q9UL41 463 aa16.12■□□□□ 0.17
CACNB1-206ENST00000539338 A0A087WWV3 80 aa16.12■□□□□ 0.17
CACNB1-206ENST00000539338 GOLGA6BA6NDN3 693 aa16.12■□□□□ 0.17
CACNB1-206ENST00000539338 MRFAP1L1Q96HT8 127 aa16.12■□□□□ 0.17
CACNB1-206ENST00000539338 IFIH1Q9BYX4 1025 aaKnown RBP16.12■□□□□ 0.17
CACNB1-206ENST00000539338 FMNL1O95466 1100 aaPredicted RBP16.12■□□□□ 0.17
CACNB1-206ENST00000539338 SND1Q7KZF4 910 aaKnown RBP eCLIP16.12■□□□□ 0.17
CACNB1-206ENST00000539338 MYCT1Q8N699 235 aa16.12■□□□□ 0.17
CACNB1-206ENST00000539338 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.12■□□□□ 0.17
CACNB1-206ENST00000539338 GREM2Q9H772 168 aa16.12■□□□□ 0.17
CACNB1-206ENST00000539338 ARPP21Q9UBL0 812 aaPredicted RBP16.12■□□□□ 0.17
CACNB1-206ENST00000539338 GCNT3O95395 438 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 ZNF853P0CG23 659 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 PHKA1P46020 1223 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 MORC3Q14149 939 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 FBXO18Q8NFZ0 1043 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 KIFAP3Q92845 792 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 MRRFQ96E11 262 aaKnown RBP16.11■□□□□ 0.17
CACNB1-206ENST00000539338 PPP2R2CQ9Y2T4 447 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 CRKLP46109 303 aaKnown RBP16.11■□□□□ 0.17
CACNB1-206ENST00000539338 INF2Q27J81 1249 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 SFMBT2Q5VUG0 894 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 BLIDQ8IZY5 108 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 SREK1Q8WXA9 508 aaKnown RBP16.11■□□□□ 0.17
CACNB1-206ENST00000539338 RASSF4Q9H2L5 321 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 UTP11Q9Y3A2 253 aaKnown RBP16.11■□□□□ 0.17
CACNB1-206ENST00000539338 PCCAP05165 728 aaPredicted RBP16.11■□□□□ 0.17
CACNB1-206ENST00000539338 GABPB1Q06547 395 aaPredicted RBP16.11■□□□□ 0.17
CACNB1-206ENST00000539338 GPKOWQ92917 476 aaPredicted RBP eCLIP16.11■□□□□ 0.17
CACNB1-206ENST00000539338 CTTNBP2NLQ9P2B4 639 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 IGSF1Q8N6C5 1336 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 SMTNP53814 917 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 CCDC84Q86UT8 332 aaPredicted RBP16.11■□□□□ 0.17
CACNB1-206ENST00000539338 FTOQ9C0B1 505 aaKnown RBP eCLIP16.11■□□□□ 0.17
CACNB1-206ENST00000539338 MTFR1LQ9H019 292 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 GLT8D2Q9H1C3 349 aa16.11■□□□□ 0.17
CACNB1-206ENST00000539338 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.11■□□□□ 0.17
CACNB1-206ENST00000539338 MYCLP12524 364 aaPredicted RBP16.1■□□□□ 0.17
CACNB1-206ENST00000539338 MRPL44Q9H9J2 332 aaKnown RBP16.1■□□□□ 0.17
CACNB1-206ENST00000539338 SHROOM2Q13796 1616 aa16.1■□□□□ 0.17
CACNB1-206ENST00000539338 CFBP00751 764 aa16.1■□□□□ 0.17
CACNB1-206ENST00000539338 TECP42680 631 aa16.1■□□□□ 0.17
CACNB1-206ENST00000539338 GOLGA8HP0CJ92 632 aa16.1■□□□□ 0.17
CACNB1-206ENST00000539338 UAP1Q16222 522 aaPredicted RBP16.1■□□□□ 0.17
CACNB1-206ENST00000539338 DAAM2Q86T65 1068 aa16.1■□□□□ 0.17
CACNB1-206ENST00000539338 PNMA8AQ86V59 439 aaPredicted RBP16.1■□□□□ 0.17
CACNB1-206ENST00000539338 KCNQ2O43526 872 aa16.1■□□□□ 0.17
CACNB1-206ENST00000539338 ACTN4O43707 911 aaKnown RBP16.1■□□□□ 0.17
CACNB1-206ENST00000539338 EXOC3O60645 756 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms