RNA–Protein interactions for RNA: ENST00000538478.5

LRTOMT-215, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-215ENST00000538478 CSF2RAP15509 400 aa8.18□□□□□ -1.1
LRTOMT-215ENST00000538478 POU3F3P20264 500 aaPredicted RBP8.18□□□□□ -1.1
LRTOMT-215ENST00000538478 IRX3P78415 501 aaPredicted RBP8.18□□□□□ -1.1
LRTOMT-215ENST00000538478 TRIM26Q12899 539 aaPredicted RBP8.18□□□□□ -1.1
LRTOMT-215ENST00000538478 SHROOM1Q2M3G4 852 aaPredicted RBP8.18□□□□□ -1.1
LRTOMT-215ENST00000538478 FAM47AQ5JRC9 791 aa8.18□□□□□ -1.1
LRTOMT-215ENST00000538478 PRAMEF19Q5SWL8 479 aa8.18□□□□□ -1.1
LRTOMT-215ENST00000538478 CCDC30Q5VVM6 783 aa8.18□□□□□ -1.1
LRTOMT-215ENST00000538478 VPS37DQ86XT2 251 aa8.18□□□□□ -1.1
LRTOMT-215ENST00000538478 VGLL2Q8N8G2 317 aa8.18□□□□□ -1.1
LRTOMT-215ENST00000538478 MSRAQ9UJ68 235 aa8.18□□□□□ -1.1
LRTOMT-215ENST00000538478 TBX21Q9UL17 535 aa8.18□□□□□ -1.1
LRTOMT-215ENST00000538478 MAP1BP46821 2468 aaKnown RBP8.18□□□□□ -1.1
LRTOMT-215ENST00000538478 PLXNA3P51805 1871 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 CFAP47Q6ZTR5 3102 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 VPS13AQ96RL7 3174 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 SLC15A5A6NIM6 579 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 KRT37O76014 449 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 ATP2B2Q01814 1243 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 MTMR2Q13614 643 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 GRB14Q14449 540 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 RAB30Q15771 203 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 CCDC57Q2TAC2 916 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 LRRC24Q50LG9 513 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 MFSD5Q6N075 450 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 ZSCAN29Q8IWY8 852 aaPredicted RBP8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 SLC44A5Q8NCS7 719 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 KCNH6Q9H252 994 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 SLC28A3Q9HAS3 691 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 COG5Q9UP83 839 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 MYBBP1AQ9BQG0 1328 aaKnown RBP8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 CHD6Q8TD26 2715 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 TET1Q8NFU7 2136 aa8.17□□□□□ -1.1
LRTOMT-215ENST00000538478 WDR87Q6ZQQ6 2873 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 USP17L5A8MUK1 530 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 SEPT4O43236 478 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 CAP2P40123 477 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 FASNP49327 2511 aaKnown RBP8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 PTPN5P54829 565 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 BACE1P56817 501 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 TAF7LQ5H9L4 462 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 HFE2Q6ZVN8 426 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 ANKRD33Q7Z3H0 272 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 FAM178BQ8IXR5 827 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 GJD3Q8N144 294 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 PRSS33Q8NF86 280 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 LINS1Q8NG48 757 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 HLA-CQ95604 372 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 KAZALD1Q96I82 304 aa8.16□□□□□ -1.1
LRTOMT-215ENST00000538478 CEP250Q9BV73 2442 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 SCN5AQ14524 2016 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 A0A1W2PQ45 241 aaPredicted RBP8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 A0A1W2PQY0 241 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 SOWAHBA6NEL2 793 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 ARHGEF15O94989 841 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 PGK1P00558 417 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 OATP04181 439 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 FGFR2P21802 821 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 PPIGQ13427 754 aaKnown RBP eCLIP8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 PICALMQ13492 652 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 CAVIN4Q5BKX8 364 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 METTL3Q86U44 580 aaKnown RBP8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 DNAAF4Q8WXU2 420 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 VWCEQ96DN2 955 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 TOX2Q96NM4 488 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 WDR18Q9BV38 432 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 OSBPL5Q9H0X9 879 aaPredicted RBP8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 MYH16Q9H6N6 1097 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 CERS4Q9HA82 394 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 BTBD7Q9P203 1132 aa8.15□□□□□ -1.1
LRTOMT-215ENST00000538478 MCM3APO60318 1980 aa8.15□□□□□ -1.11
LRTOMT-215ENST00000538478 ZNF236Q9UL36 1845 aa8.15□□□□□ -1.11
LRTOMT-215ENST00000538478 COL4A4P53420 1690 aaPredicted RBP8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 GAKO14976 1311 aa8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 MROH5Q6ZUA9 1318 aa8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 ZNF521Q96K83 1311 aa8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 PTPRSQ13332 1948 aa8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 RCCD1A6NED2 376 aa8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 COBLO75128 1261 aa8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 SWT1Q5T5J6 900 aaKnown RBP8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 PPP2R2DQ66LE6 453 aa8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 SPRED2Q7Z698 418 aa8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 CCAR1Q8IX12 1150 aaKnown RBP8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 WDR66Q8TBY9 1149 aa8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 LENG1Q96BZ8 264 aaPredicted RBP8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 IFT57Q9NWB7 429 aa8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 HCSTQ9UBK5 93 aa8.14□□□□□ -1.11
LRTOMT-215ENST00000538478 KMT2EQ8IZD2 1858 aa8.13□□□□□ -1.11
LRTOMT-215ENST00000538478 F6X3S4 739 aa8.13□□□□□ -1.11
LRTOMT-215ENST00000538478 LPXNO60711 386 aa8.13□□□□□ -1.11
LRTOMT-215ENST00000538478 PDE8BO95263 885 aa8.13□□□□□ -1.11
LRTOMT-215ENST00000538478 SLC5A1P13866 664 aa8.13□□□□□ -1.11
LRTOMT-215ENST00000538478 IL9P15248 144 aa8.13□□□□□ -1.11
LRTOMT-215ENST00000538478 SLC4A3P48751 1232 aa8.13□□□□□ -1.11
LRTOMT-215ENST00000538478 RHBDL3P58872 404 aa8.13□□□□□ -1.11
LRTOMT-215ENST00000538478 TCF15Q12870 199 aa8.13□□□□□ -1.11
LRTOMT-215ENST00000538478 FLIIQ13045 1269 aa8.13□□□□□ -1.11
LRTOMT-215ENST00000538478 CSPP1Q1MSJ5 1256 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms