RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 MYOCDQ8IZQ8 938 aa18.56■□□□□ 0.56
SCARB1-205ENST00000538291 PCDHA12Q9UN75 941 aa18.56■□□□□ 0.56
SCARB1-205ENST00000538291 FRMPD2Q68DX3 1309 aaPredicted RBP18.56■□□□□ 0.56
SCARB1-205ENST00000538291 STAT1P42224 750 aa18.56■□□□□ 0.56
SCARB1-205ENST00000538291 KLHL7Q8IXQ5 586 aa18.56■□□□□ 0.56
SCARB1-205ENST00000538291 RPUSD2Q8IZ73 545 aaKnown RBP18.56■□□□□ 0.56
SCARB1-205ENST00000538291 FAM207AQ9NSI2 230 aaPredicted RBP18.56■□□□□ 0.56
SCARB1-205ENST00000538291 PDE6AP16499 860 aa18.56■□□□□ 0.56
SCARB1-205ENST00000538291 CDC37L1Q7L3B6 337 aa18.56■□□□□ 0.56
SCARB1-205ENST00000538291 RRAGAQ7L523 313 aa18.56■□□□□ 0.56
SCARB1-205ENST00000538291 CBX8Q9HC52 389 aa18.56■□□□□ 0.56
SCARB1-205ENST00000538291 CFAP221Q4G0U5 840 aa18.56■□□□□ 0.56
SCARB1-205ENST00000538291 TEKT3Q9BXF9 490 aa18.56■□□□□ 0.56
SCARB1-205ENST00000538291 KDRP35968 1356 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 TMOD1P28289 359 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 ZNF75DP51815 510 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 NEDD9Q14511 834 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 KRT26Q7Z3Y9 468 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 ZNF274Q96GC6 653 aaPredicted RBP18.55■□□□□ 0.56
SCARB1-205ENST00000538291 BCAMP50895 628 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 LRRC47Q8N1G4 583 aaKnown RBP18.55■□□□□ 0.56
SCARB1-205ENST00000538291 NLRC4Q9NPP4 1024 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 SERTAD1Q9UHV2 236 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 PBRM1Q86U86 1689 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 KLRF2D3W0D1 207 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 CAPN9O14815 690 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 KIF11P52732 1056 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 GALNT17Q6IS24 598 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 GOLGA6CA6NDK9 693 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 GOLGA6BA6NDN3 693 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 N4BP1O75113 896 aaKnown RBP18.55■□□□□ 0.56
SCARB1-205ENST00000538291 GOLGA6DP0CG33 693 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 ARHGEF6Q15052 776 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 GOLGA6AQ9NYA3 693 aa18.55■□□□□ 0.56
SCARB1-205ENST00000538291 ZHX1Q9UKY1 873 aaPredicted RBP18.55■□□□□ 0.56
SCARB1-205ENST00000538291 RIOK3O14730 519 aaKnown RBP18.54■□□□□ 0.56
SCARB1-205ENST00000538291 NBPF3Q9H094 633 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 NRBP2Q9NSY0 501 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 TMEM2Q9UHN6 1383 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 I3L4J1 428 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 PAK2Q13177 524 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 MYSM1Q5VVJ2 828 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 FANCBQ8NB91 859 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 AFAP1L1Q8TED9 768 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 SUGCTQ9HAC7 445 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 RTEL1Q9NZ71 1219 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 SLFN13Q68D06 897 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 EP400NLQ6ZTU2 488 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 NEK8Q86SG6 692 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 LSM14BQ9BX40 385 aaKnown RBP18.54■□□□□ 0.56
SCARB1-205ENST00000538291 CACYBPQ9HB71 228 aaKnown RBP18.54■□□□□ 0.56
SCARB1-205ENST00000538291 CHRNDQ07001 517 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 TTLL7Q6ZT98 887 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 GPIHBP1Q8IV16 184 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 SDR42E1Q8WUS8 393 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 MIS12Q9H081 205 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 C1orf112Q9NSG2 853 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 HESX1Q9UBX0 185 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 TNKSO95271 1327 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 KRT15P19012 456 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 USPL1Q5W0Q7 1092 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 GTF3C6Q969F1 213 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 MMS19Q96T76 1030 aa18.54■□□□□ 0.56
SCARB1-205ENST00000538291 LARSQ9P2J5 1176 aaKnown RBP18.54■□□□□ 0.56
SCARB1-205ENST00000538291 KIF24Q5T7B8 1368 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 K7ENM7 598 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 TECP42680 631 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 LONRF3Q496Y0 759 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 SND1Q7KZF4 910 aaKnown RBP eCLIP18.53■□□□□ 0.569e-10■■■■□ 25.5
SCARB1-205ENST00000538291 TRIM50Q86XT4 487 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 NOSTRINQ8IVI9 506 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 EPSTI1Q96J88 318 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 SLF1Q9BQI6 1058 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 IFIH1Q9BYX4 1025 aaKnown RBP18.53■□□□□ 0.56
SCARB1-205ENST00000538291 TRPC5Q9UL62 973 aaPredicted RBP18.53■□□□□ 0.56
SCARB1-205ENST00000538291 OATP04181 439 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 GKAP1Q5VSY0 366 aaPredicted RBP18.53■□□□□ 0.56
SCARB1-205ENST00000538291 TYW1BQ6NUM6 668 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 PLA2G4DQ86XP0 818 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 U2AF1L4Q8WU68 220 aaKnown RBP18.53■□□□□ 0.56
SCARB1-205ENST00000538291 MAPKBP1O60336 1514 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 ABL1P00519 1130 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 SARNPP82979 210 aaKnown RBP18.53■□□□□ 0.56
SCARB1-205ENST00000538291 KRT81Q14533 505 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 CEP85LQ5SZL2 805 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 FAM160B1Q5W0V3 765 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 TRMT44Q8IYL2 757 aaKnown RBP18.53■□□□□ 0.56
SCARB1-205ENST00000538291 ATP2A3Q93084 1043 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 AMFRQ9UKV5 643 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 OR52Z1P0C646 297 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 ABCB5Q2M3G0 1257 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 BSPRYQ5W0U4 402 aa18.53■□□□□ 0.56
SCARB1-205ENST00000538291 A6NNZ2 444 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 TMEM232C9JQI7 657 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 MAN1A1P33908 653 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 CCNA1P78396 465 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 KCTD2Q14681 263 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 TUBB8Q3ZCM7 444 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 FAM178BQ8IXR5 827 aa18.52■□□□□ 0.56
SCARB1-205ENST00000538291 RSAD2Q8WXG1 361 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms