RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 NOVP48745 357 aa13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 ARL6IP4Q66PJ3 421 aaKnown RBP13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 ARMCX5Q6P1M9 558 aa13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 C4orf32Q8N8J7 132 aa13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 DPF2Q92785 391 aa13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 STX8Q9UNK0 236 aa13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 DDX60LQ5H9U9 1706 aaKnown RBP13.01□□□□□ -0.33
SLC28A1-204ENST00000538177 VWA3AA6NCI4 1184 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 SERPINC1P01008 464 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 ZNF18P17022 549 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 ERCC5P28715 1186 aaPredicted RBP13□□□□□ -0.33
SLC28A1-204ENST00000538177 FMR1Q06787 632 aaKnown RBP eCLIP13□□□□□ -0.33
SLC28A1-204ENST00000538177 TPD52L1Q16890 204 aaPredicted RBP13□□□□□ -0.33
SLC28A1-204ENST00000538177 TYW1BQ6NUM6 668 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 NLGN1Q8N2Q7 840 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 CCDC148Q8NFR7 591 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 GPKOWQ92917 476 aaPredicted RBP eCLIP13□□□□□ -0.33
SLC28A1-204ENST00000538177 PYM1Q9BRP8 204 aaKnown RBP13□□□□□ -0.33
SLC28A1-204ENST00000538177 SPZ1Q9BXG8 430 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 BARHL2Q9NY43 387 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 DAGLAQ9Y4D2 1042 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 BRWD3Q6RI45 1802 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 RRP9O43818 475 aaKnown RBP13□□□□□ -0.33
SLC28A1-204ENST00000538177 TNNT1P13805 278 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 SMARCA1P28370 1054 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 MCM7P33993 719 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 GTF2IP78347 998 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 DPYDQ12882 1025 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 IL17AQ16552 155 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 WWC2Q6AWC2 1192 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 C16orf45Q96MC5 204 aaPredicted RBP13□□□□□ -0.33
SLC28A1-204ENST00000538177 GSDMAQ96QA5 445 aa13□□□□□ -0.33
SLC28A1-204ENST00000538177 KLRF2D3W0D1 207 aa12.99□□□□□ -0.33
SLC28A1-204ENST00000538177 STXBP3O00186 592 aa12.99□□□□□ -0.33
SLC28A1-204ENST00000538177 SRGNP10124 158 aa12.99□□□□□ -0.33
SLC28A1-204ENST00000538177 TOP1P11387 765 aaKnown RBP12.99□□□□□ -0.33
SLC28A1-204ENST00000538177 SFPQP23246 707 aaKnown RBP eCLIP12.99□□□□□ -0.33
SLC28A1-204ENST00000538177 KCNJ6P48051 423 aa12.99□□□□□ -0.33
SLC28A1-204ENST00000538177 E2F4Q16254 413 aa12.99□□□□□ -0.33
SLC28A1-204ENST00000538177 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
SLC28A1-204ENST00000538177 VSTM4Q8IW00 320 aa12.99□□□□□ -0.33
SLC28A1-204ENST00000538177 IQUBQ8NA54 791 aa12.99□□□□□ -0.33
SLC28A1-204ENST00000538177 MED15Q96RN5 788 aa12.99□□□□□ -0.33
SLC28A1-204ENST00000538177 NPR1P16066 1061 aa12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 LONP1P36776 959 aaKnown RBP12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 AFMP43652 599 aa12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 CFAP100Q494V2 611 aa12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 CCAR2Q8N163 923 aaKnown RBP12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 PCDHA6Q9UN73 950 aa12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 NFE2L3Q9Y4A8 694 aa12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 PCDHA8Q9Y5H6 950 aa12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 CCDC194A0A1B0GVG4 234 aa12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 USP27XA6NNY8 438 aa12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 RIOK3O14730 519 aaKnown RBP12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 RIMBP2O15034 1052 aa12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 NYAP1Q6ZVC0 841 aa12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 AKT1S1Q96B36 256 aa12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 ZC3H12CQ9C0D7 883 aaKnown RBP12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 INTS13Q9NVM9 706 aa12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 PAXBP1Q9Y5B6 917 aa12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 ANKRD31Q8N7Z5 1873 aa12.98□□□□□ -0.33
SLC28A1-204ENST00000538177 PLSCR1O15162 318 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 PARP1P09874 1014 aaKnown RBP12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 GABPAQ06546 454 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 HEATR3Q7Z4Q2 680 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 COL23A1Q86Y22 540 aaPredicted RBP12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 CERS5Q8N5B7 392 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 RASGRP4Q8TDF6 673 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 CEP95Q96GE4 821 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 PLIN4Q96Q06 1357 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 NRXN2Q9P2S2 1712 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 MYH1P12882 1939 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 NRDCO43847 1150 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 GOLGA8HP0CJ92 632 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 ALDH1B1P30837 517 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 CUL4BQ13620 913 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 PDXDC2PQ6P474 469 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 ZMYND12Q9H0C1 365 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 TMX1Q9H3N1 280 aa12.97□□□□□ -0.33
SLC28A1-204ENST00000538177 TMEM232C9JQI7 657 aa12.96□□□□□ -0.33
SLC28A1-204ENST00000538177 RBM10P98175 930 aaKnown RBP12.96□□□□□ -0.33
SLC28A1-204ENST00000538177 HSP90AA2PQ14568 343 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-204ENST00000538177 SPATA1Q5VX52 437 aa12.96□□□□□ -0.33
SLC28A1-204ENST00000538177 E4F1Q66K89 784 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-204ENST00000538177 TRMT44Q8IYL2 757 aaKnown RBP12.96□□□□□ -0.33
SLC28A1-204ENST00000538177 CCDC12Q8WUD4 166 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-204ENST00000538177 MTMR7Q9Y216 660 aa12.96□□□□□ -0.33
SLC28A1-204ENST00000538177 PSDA5PKW4 1024 aaPredicted RBP12.96□□□□□ -0.34
SLC28A1-204ENST00000538177 GTPBP6O43824 516 aaPredicted RBP12.96□□□□□ -0.34
SLC28A1-204ENST00000538177 CD44P16070 742 aaKnown RBP12.96□□□□□ -0.34
SLC28A1-204ENST00000538177 CDK11BP21127 795 aaKnown RBP12.96□□□□□ -0.34
SLC28A1-204ENST00000538177 CASP1P29466 404 aa12.96□□□□□ -0.34
SLC28A1-204ENST00000538177 PDE6BP35913 854 aa12.96□□□□□ -0.34
SLC28A1-204ENST00000538177 TBX2Q13207 712 aaPredicted RBP12.96□□□□□ -0.34
SLC28A1-204ENST00000538177 PTPN14Q15678 1187 aa12.96□□□□□ -0.34
SLC28A1-204ENST00000538177 CEP135Q66GS9 1140 aa12.96□□□□□ -0.34
SLC28A1-204ENST00000538177 USP17L2Q6R6M4 530 aa12.96□□□□□ -0.34
SLC28A1-204ENST00000538177 CCDC112Q8NEF3 446 aa12.96□□□□□ -0.34
SLC28A1-204ENST00000538177 FLAD1Q8NFF5 587 aa12.96□□□□□ -0.34
SLC28A1-204ENST00000538177 MTRQ99707 1265 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms