RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 AIFM3Q96NN9 605 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 MAP3K14Q99558 947 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 LLPHQ9BRT6 129 aaKnown RBP18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 WDR18Q9BV38 432 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 SLC26A6Q9BXS9 759 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 UBA5Q9GZZ9 404 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 VCPKMTQ9H867 229 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 RBM28Q9NW13 759 aaKnown RBP18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 KLRF2D3W0D1 207 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 CYTH3O43739 400 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 DHX16O60231 1041 aaKnown RBP18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 IFNAR1P17181 557 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 KIF5BP33176 963 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 SLC16A2P36021 539 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 SLC1A4P43007 532 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 PKP1Q13835 747 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 OTUD5Q96G74 571 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 KIAA1683Q9H0B3 1180 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 EMILIN3Q9NT22 766 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 AFG3L2Q9Y4W6 797 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 CNTNAP5Q8WYK1 1306 aa18.2■□□□□ 0.5
SFSWAP-206ENST00000537582 CCDC196A0A1B0GTZ2 297 aa18.2■□□□□ 0.5
SFSWAP-206ENST00000537582 FAM83BQ5T0W9 1011 aa18.2■□□□□ 0.5
SFSWAP-206ENST00000537582 GMCL1Q96IK5 515 aa18.2■□□□□ 0.5
SFSWAP-206ENST00000537582 GOPCQ9HD26 462 aa18.2■□□□□ 0.5
SFSWAP-206ENST00000537582 GJB4Q9NTQ9 266 aa18.2■□□□□ 0.5
SFSWAP-206ENST00000537582 ORC3Q9UBD5 711 aaPredicted RBP18.2■□□□□ 0.5
SFSWAP-206ENST00000537582 PASKQ96RG2 1323 aa18.2■□□□□ 0.5
SFSWAP-206ENST00000537582 USP17L10C9JJH3 530 aa18.19■□□□□ 0.5
SFSWAP-206ENST00000537582 FMNL1O95466 1100 aaPredicted RBP18.19■□□□□ 0.5
SFSWAP-206ENST00000537582 GJA5P36382 358 aa18.19■□□□□ 0.5
SFSWAP-206ENST00000537582 ASPRV1Q53RT3 343 aa18.19■□□□□ 0.5
SFSWAP-206ENST00000537582 DCAF4Q8WV16 495 aa18.19■□□□□ 0.5
SFSWAP-206ENST00000537582 AS3MTQ9HBK9 375 aa18.19■□□□□ 0.5
SFSWAP-206ENST00000537582 SYNPO2Q9UMS6 1093 aa18.19■□□□□ 0.5
SFSWAP-206ENST00000537582 SPDYE5A6NIY4 337 aa18.18■□□□□ 0.5
SFSWAP-206ENST00000537582 HMGCS2P54868 508 aa18.18■□□□□ 0.5
SFSWAP-206ENST00000537582 BACE1P56817 501 aa18.18■□□□□ 0.5
SFSWAP-206ENST00000537582 OPTNQ96CV9 577 aa18.18■□□□□ 0.5
SFSWAP-206ENST00000537582 SH2D4AQ9H788 454 aa18.18■□□□□ 0.5
SFSWAP-206ENST00000537582 V9GY48 417 aaPredicted RBP18.18■□□□□ 0.5
SFSWAP-206ENST00000537582 IRF6O14896 467 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 CDKL5O76039 1030 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 BMP3P12645 472 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 SSRP1Q08945 709 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 PPP2R5BQ15173 497 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 CPLX2Q6PUV4 134 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 ERO1BQ86YB8 467 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 C2orf69Q8N8R5 385 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 SMC1BQ8NDV3 1235 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 VAT1LQ9HCJ6 419 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 TMEM232C9JQI7 657 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 VCAM1P19320 739 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 SNAP25P60880 206 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 PKN1Q16512 942 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 OTUD7BQ6GQQ9 843 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 SHISA4Q96DD7 197 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 FBXO28Q9NVF7 368 aa18.17■□□□□ 0.5
SFSWAP-206ENST00000537582 GNAQP50148 359 aa18.16■□□□□ 0.5
SFSWAP-206ENST00000537582 FKBP1BP68106 108 aa18.16■□□□□ 0.5
SFSWAP-206ENST00000537582 HMGN5P82970 282 aaKnown RBP18.16■□□□□ 0.5
SFSWAP-206ENST00000537582 PPATQ06203 517 aa18.16■□□□□ 0.5
SFSWAP-206ENST00000537582 MKRN3Q13064 507 aaKnown RBP18.16■□□□□ 0.5
SFSWAP-206ENST00000537582 GPATCH4Q5T3I0 446 aaKnown RBP18.16■□□□□ 0.5
SFSWAP-206ENST00000537582 ADGRF4Q8IZF3 695 aa18.16■□□□□ 0.5
SFSWAP-206ENST00000537582 FAM184AQ8NB25 1140 aa18.16■□□□□ 0.5
SFSWAP-206ENST00000537582 SLC10A4Q96EP9 437 aa18.16■□□□□ 0.5
SFSWAP-206ENST00000537582 CWC22Q9HCG8 908 aaKnown RBP18.16■□□□□ 0.5
SFSWAP-206ENST00000537582 STK36Q9NRP7 1315 aa18.15■□□□□ 0.5
SFSWAP-206ENST00000537582 TOMM70O94826 608 aa18.15■□□□□ 0.5
SFSWAP-206ENST00000537582 SYT1P21579 422 aa18.15■□□□□ 0.5
SFSWAP-206ENST00000537582 GUCY1B3Q02153 619 aa18.15■□□□□ 0.5
SFSWAP-206ENST00000537582 FOXD4L5Q5VV16 416 aaPredicted RBP18.15■□□□□ 0.5
SFSWAP-206ENST00000537582 SAMD1Q6SPF0 538 aaPredicted RBP18.15■□□□□ 0.5
SFSWAP-206ENST00000537582 HOMER1Q86YM7 354 aa18.15■□□□□ 0.5
SFSWAP-206ENST00000537582 FOXD4L4Q8WXT5 416 aaPredicted RBP18.15■□□□□ 0.5
SFSWAP-206ENST00000537582 PIGSQ96S52 555 aa18.15■□□□□ 0.5
SFSWAP-206ENST00000537582 SPZ1Q9BXG8 430 aa18.15■□□□□ 0.5
SFSWAP-206ENST00000537582 RNF26Q9BY78 433 aaPredicted RBP18.15■□□□□ 0.5
SFSWAP-206ENST00000537582 JMJD4Q9H9V9 463 aa18.15■□□□□ 0.5
SFSWAP-206ENST00000537582 TRPM7Q96QT4 1865 aa18.15■□□□□ 0.5
SFSWAP-206ENST00000537582 BAZ2BQ9UIF8 2168 aaKnown RBP18.15■□□□□ 0.5
SFSWAP-206ENST00000537582 PRPF3O43395 683 aaKnown RBP18.14■□□□□ 0.49
SFSWAP-206ENST00000537582 HUNKP57058 714 aa18.14■□□□□ 0.49
SFSWAP-206ENST00000537582 IKQ13123 557 aaPredicted RBP18.14■□□□□ 0.49
SFSWAP-206ENST00000537582 PPIL2Q13356 520 aa18.14■□□□□ 0.49
SFSWAP-206ENST00000537582 TRIM22Q8IYM9 498 aa18.14■□□□□ 0.49
SFSWAP-206ENST00000537582 RBM46Q8TBY0 533 aaKnown RBP18.14■□□□□ 0.49
SFSWAP-206ENST00000537582 LZTS2Q9BRK4 669 aa18.14■□□□□ 0.49
SFSWAP-206ENST00000537582 ALG1Q9BT22 464 aa18.14■□□□□ 0.49
SFSWAP-206ENST00000537582 RPAP3Q9H6T3 665 aaPredicted RBP18.14■□□□□ 0.49
SFSWAP-206ENST00000537582 RIOX1Q9H6W3 641 aa18.14■□□□□ 0.49
SFSWAP-206ENST00000537582 ZDHHC9Q9Y397 364 aa18.14■□□□□ 0.49
SFSWAP-206ENST00000537582 TAL1P17542 331 aaPredicted RBP18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 USP14P54578 494 aa18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 TREML2Q5T2D2 321 aa18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 LARP1BQ659C4 914 aaKnown RBP18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 LPAR1Q92633 364 aa18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 GPKOWQ92917 476 aaPredicted RBP eCLIP18.13■□□□□ 0.49
SFSWAP-206ENST00000537582 C12orf42Q96LP6 360 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms