RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 STX8Q9UNK0 236 aa20.48■□□□□ 0.87
GPN3-202ENST00000537466 MYCP01106 439 aaPredicted RBP20.47■□□□□ 0.87
GPN3-202ENST00000537466 MAPK4P31152 587 aa20.47■□□□□ 0.87
GPN3-202ENST00000537466 GPR142Q7Z601 462 aa20.47■□□□□ 0.87
GPN3-202ENST00000537466 NBPF11Q86T75 865 aa20.47■□□□□ 0.87
GPN3-202ENST00000537466 GMCL1P1Q8NEA9 526 aa20.47■□□□□ 0.87
GPN3-202ENST00000537466 SYNPO2Q9UMS6 1093 aa20.47■□□□□ 0.87
GPN3-202ENST00000537466 ADCY3O60266 1144 aa20.46■□□□□ 0.87
GPN3-202ENST00000537466 PCP11498 1178 aaKnown RBP20.46■□□□□ 0.87
GPN3-202ENST00000537466 ELNP15502 786 aa20.46■□□□□ 0.87
GPN3-202ENST00000537466 NOVP48745 357 aa20.46■□□□□ 0.87
GPN3-202ENST00000537466 IRF5Q13568 498 aa20.46■□□□□ 0.87
GPN3-202ENST00000537466 IMMTQ16891 758 aaKnown RBP20.46■□□□□ 0.87
GPN3-202ENST00000537466 RNF41Q9H4P4 317 aaPredicted RBP20.46■□□□□ 0.87
GPN3-202ENST00000537466 CTNNA3Q9UI47 895 aa20.46■□□□□ 0.87
GPN3-202ENST00000537466 PPP1R9AQ9ULJ8 1098 aa20.46■□□□□ 0.87
GPN3-202ENST00000537466 ADAMTS5Q9UNA0 930 aa20.46■□□□□ 0.87
GPN3-202ENST00000537466 CCNA1P78396 465 aa20.45■□□□□ 0.86
GPN3-202ENST00000537466 BMP2KLQ5H9B9 411 aa20.45■□□□□ 0.86
GPN3-202ENST00000537466 SLFN13Q68D06 897 aa20.45■□□□□ 0.86
GPN3-202ENST00000537466 CCAR1Q8IX12 1150 aaKnown RBP20.45■□□□□ 0.86
GPN3-202ENST00000537466 SLAIN1Q8ND83 568 aa20.45■□□□□ 0.86
GPN3-202ENST00000537466 CHMP4CQ96CF2 233 aa20.45■□□□□ 0.86
GPN3-202ENST00000537466 KIAA0100Q14667 2235 aaKnown RBP20.45■□□□□ 0.86
GPN3-202ENST00000537466 POTEFA5A3E0 1075 aa20.44■□□□□ 0.86
GPN3-202ENST00000537466 RGS19P49795 217 aa20.44■□□□□ 0.86
GPN3-202ENST00000537466 PPP4R3BQ5MIZ7 849 aa20.44■□□□□ 0.86
GPN3-202ENST00000537466 RASGRP2Q7LDG7 609 aa20.44■□□□□ 0.86
GPN3-202ENST00000537466 PLEKHH3Q7Z736 793 aa20.44■□□□□ 0.86
GPN3-202ENST00000537466 MB21D1Q8N884 522 aa20.44■□□□□ 0.86
GPN3-202ENST00000537466 MOV10L1Q9BXT6 1211 aaKnown RBP20.44■□□□□ 0.86
GPN3-202ENST00000537466 SPATC1LQ9H0A9 340 aa20.44■□□□□ 0.86
GPN3-202ENST00000537466 TCP11L1Q9NUJ3 509 aa20.44■□□□□ 0.86
GPN3-202ENST00000537466 ZNF236Q9UL36 1845 aa20.44■□□□□ 0.86
GPN3-202ENST00000537466 PLS1Q14651 629 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 TMEM132BQ14DG7 1078 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 MTFR1Q15390 333 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 WDR78Q5VTH9 848 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 PXYLP1Q8TE99 480 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 SLF1Q9BQI6 1058 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 B4E1Z4 1266 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 VWA5AO00534 786 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 BMP3P12645 472 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 CYP2B6P20813 491 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 MORN1Q5T089 497 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 REPS2Q8NFH8 660 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 ESR2Q92731 530 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 USP6NLQ92738 828 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 NUDT12Q9BQG2 462 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 ZKSCAN3Q9BRR0 538 aa20.43■□□□□ 0.86
GPN3-202ENST00000537466 CWC22Q9HCG8 908 aaKnown RBP20.43■□□□□ 0.86
GPN3-202ENST00000537466 PLXNA1Q9UIW2 1896 aa20.42■□□□□ 0.86
GPN3-202ENST00000537466 KDM4AO75164 1064 aa20.42■□□□□ 0.86
GPN3-202ENST00000537466 MCCP23508 829 aa20.42■□□□□ 0.86
GPN3-202ENST00000537466 RCSD1Q6JBY9 416 aa20.42■□□□□ 0.86
GPN3-202ENST00000537466 SOCS4Q8WXH5 440 aa20.42■□□□□ 0.86
GPN3-202ENST00000537466 TMEM47Q9BQJ4 181 aa20.42■□□□□ 0.86
GPN3-202ENST00000537466 BIN2Q9UBW5 565 aaPredicted RBP20.42■□□□□ 0.86
GPN3-202ENST00000537466 MTMR7Q9Y216 660 aa20.42■□□□□ 0.86
GPN3-202ENST00000537466 INHAP05111 366 aa20.41■□□□□ 0.86
GPN3-202ENST00000537466 CYP21A2P08686 494 aa20.41■□□□□ 0.86
GPN3-202ENST00000537466 ERCC3P19447 782 aa20.41■□□□□ 0.86
GPN3-202ENST00000537466 PTPREP23469 700 aa20.41■□□□□ 0.86
GPN3-202ENST00000537466 PRPF38AQ8NAV1 312 aaKnown RBP20.41■□□□□ 0.86
GPN3-202ENST00000537466 GMCL1Q96IK5 515 aa20.41■□□□□ 0.86
GPN3-202ENST00000537466 ESYT1Q9BSJ8 1104 aa20.41■□□□□ 0.86
GPN3-202ENST00000537466 FEM1BQ9UK73 627 aa20.41■□□□□ 0.86
GPN3-202ENST00000537466 ZNF214Q9UL59 606 aaPredicted RBP20.41■□□□□ 0.86
GPN3-202ENST00000537466 TOP1P11387 765 aaKnown RBP20.4■□□□□ 0.86
GPN3-202ENST00000537466 SLC1A4P43007 532 aa20.4■□□□□ 0.86
GPN3-202ENST00000537466 SHCBP1Q8NEM2 672 aa20.4■□□□□ 0.86
GPN3-202ENST00000537466 TRIB2Q92519 343 aa20.4■□□□□ 0.86
GPN3-202ENST00000537466 MAP4K1Q92918 833 aa20.4■□□□□ 0.86
GPN3-202ENST00000537466 KIFC2Q96AC6 838 aa20.4■□□□□ 0.86
GPN3-202ENST00000537466 PPP4R2Q9NY27 417 aa20.4■□□□□ 0.86
GPN3-202ENST00000537466 ISY1Q9ULR0 285 aaKnown RBP20.4■□□□□ 0.86
GPN3-202ENST00000537466 TAF6LQ9Y6J9 622 aa20.4■□□□□ 0.86
GPN3-202ENST00000537466 U3KPZ7 1027 aaPredicted RBP20.4■□□□□ 0.86
GPN3-202ENST00000537466 TNRC18O15417 2968 aaPredicted RBP20.39■□□□□ 0.86
GPN3-202ENST00000537466 TMEM232C9JQI7 657 aa20.39■□□□□ 0.85
GPN3-202ENST00000537466 UBXN2AP68543 259 aa20.39■□□□□ 0.85
GPN3-202ENST00000537466 TRIM32Q13049 653 aa20.39■□□□□ 0.85
GPN3-202ENST00000537466 GRB14Q14449 540 aa20.39■□□□□ 0.85
GPN3-202ENST00000537466 KCTD1Q719H9 257 aa20.39■□□□□ 0.85
GPN3-202ENST00000537466 NCAPG2Q86XI2 1143 aa20.39■□□□□ 0.85
GPN3-202ENST00000537466 TMEM106CQ9BVX2 250 aa20.39■□□□□ 0.85
GPN3-202ENST00000537466 ZSWIM5Q9P217 1185 aa20.39■□□□□ 0.85
GPN3-202ENST00000537466 IVNS1ABPQ9Y6Y0 642 aa20.39■□□□□ 0.85
GPN3-202ENST00000537466 SMCHD1A6NHR9 2005 aa20.39■□□□□ 0.85
GPN3-202ENST00000537466 SLC15A5A6NIM6 579 aa20.38■□□□□ 0.85
GPN3-202ENST00000537466 CCL5P13501 91 aa20.38■□□□□ 0.85
GPN3-202ENST00000537466 RGS2P41220 211 aa20.38■□□□□ 0.85
GPN3-202ENST00000537466 MAP2K5Q13163 448 aa20.38■□□□□ 0.85
GPN3-202ENST00000537466 CCL14Q16627 93 aa20.38■□□□□ 0.85
GPN3-202ENST00000537466 TTC14Q96N46 770 aa20.38■□□□□ 0.85
GPN3-202ENST00000537466 KRT23Q9C075 422 aa20.38■□□□□ 0.85
GPN3-202ENST00000537466 LSG1Q9H089 658 aaKnown RBP20.38■□□□□ 0.85
GPN3-202ENST00000537466 UNC93B1Q9H1C4 597 aa20.38■□□□□ 0.85
GPN3-202ENST00000537466 RBM8AQ9Y5S9 174 aaKnown RBP20.38■□□□□ 0.85
GPN3-202ENST00000537466 HMGCRP04035 888 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms