RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 IQUBQ8NA54 791 aa15.46■□□□□ 0.07
SMG6-203ENST00000536871 CCDC150Q8NCX0 1101 aa15.46■□□□□ 0.07
SMG6-203ENST00000536871 SPATA20Q8TB22 786 aa15.46■□□□□ 0.07
SMG6-203ENST00000536871 RRP36Q96EU6 259 aaKnown RBP15.46■□□□□ 0.07
SMG6-203ENST00000536871 OSBPL5Q9H0X9 879 aaPredicted RBP15.46■□□□□ 0.07
SMG6-203ENST00000536871 EHD4Q9H223 541 aa15.46■□□□□ 0.07
SMG6-203ENST00000536871 KCNF1Q9H3M0 494 aa15.46■□□□□ 0.07
SMG6-203ENST00000536871 SEC63Q9UGP8 760 aaKnown RBP15.46■□□□□ 0.07
SMG6-203ENST00000536871 TTF2Q9UNY4 1162 aaKnown RBP15.46■□□□□ 0.07
SMG6-203ENST00000536871 ANKRD31Q8N7Z5 1873 aa15.46■□□□□ 0.07
SMG6-203ENST00000536871 ESYT2A0FGR8 921 aa15.46■□□□□ 0.06
SMG6-203ENST00000536871 KLRF2D3W0D1 207 aa15.46■□□□□ 0.06
SMG6-203ENST00000536871 BIN1O00499 593 aa15.46■□□□□ 0.06
SMG6-203ENST00000536871 RIMBP2O15034 1052 aa15.46■□□□□ 0.06
SMG6-203ENST00000536871 ERCC5P28715 1186 aaPredicted RBP15.46■□□□□ 0.06
SMG6-203ENST00000536871 NCAPHQ15003 741 aa15.46■□□□□ 0.06
SMG6-203ENST00000536871 DNTTIP2Q5QJE6 756 aaKnown RBP15.46■□□□□ 0.06
SMG6-203ENST00000536871 PIK3AP1Q6ZUJ8 805 aa15.46■□□□□ 0.06
SMG6-203ENST00000536871 KRT25Q7Z3Z0 450 aa15.46■□□□□ 0.06
SMG6-203ENST00000536871 CNKSR1Q969H4 720 aa15.46■□□□□ 0.06
SMG6-203ENST00000536871 CCDC17Q96LX7 622 aa15.46■□□□□ 0.06
SMG6-203ENST00000536871 ZNF830Q96NB3 372 aaPredicted RBP15.46■□□□□ 0.06
SMG6-203ENST00000536871 GSDMAQ96QA5 445 aa15.46■□□□□ 0.06
SMG6-203ENST00000536871 C6orf50Q9HD87 102 aa15.46■□□□□ 0.06
SMG6-203ENST00000536871 SERTAD1Q9UHV2 236 aa15.46■□□□□ 0.06
SMG6-203ENST00000536871 hCG_1642624A0A1W2PR95 340 aa15.45■□□□□ 0.06
SMG6-203ENST00000536871 PTGDRQ13258 359 aa15.45■□□□□ 0.06
SMG6-203ENST00000536871 MORC3Q14149 939 aa15.45■□□□□ 0.06
SMG6-203ENST00000536871 STRIP1Q5VSL9 837 aa15.45■□□□□ 0.06
SMG6-203ENST00000536871 SUPT20HQ8NEM7 779 aa15.45■□□□□ 0.06
SMG6-203ENST00000536871 ERCC4Q92889 916 aaPredicted RBP15.45■□□□□ 0.06
SMG6-203ENST00000536871 ZMYND12Q9H0C1 365 aa15.45■□□□□ 0.06
SMG6-203ENST00000536871 DHX36Q9H2U1 1008 aaKnown RBP15.45■□□□□ 0.06
SMG6-203ENST00000536871 SERPINB13Q9UIV8 391 aa15.45■□□□□ 0.06
SMG6-203ENST00000536871 PRPHP41219 470 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 ZNF174Q15697 407 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 SH3RF1Q7Z6J0 888 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 LRRC8AQ8IWT6 810 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 STAG2Q8N3U4 1231 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 SLC44A5Q8NCS7 719 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 ENOX1Q8TC92 643 aaKnown RBP15.44■□□□□ 0.06
SMG6-203ENST00000536871 PRDM4Q9UKN5 801 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 M0R2N6 131 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 STXBP3O00186 592 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 MYL1P05976 194 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 EARS2Q5JPH6 523 aaKnown RBP15.44■□□□□ 0.06
SMG6-203ENST00000536871 SOGA3Q5TF21 947 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 C2CD5Q86YS7 1000 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 SYMPKQ92797 1274 aaKnown RBP15.44■□□□□ 0.06
SMG6-203ENST00000536871 CEP95Q96GE4 821 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 ZDHHC15Q96MV8 337 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 USP40Q9NVE5 1235 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 MTMR4Q9NYA4 1195 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 MAN1B1Q9UKM7 699 aa15.44■□□□□ 0.06
SMG6-203ENST00000536871 FOCADQ5VW36 1801 aa15.43■□□□□ 0.06
SMG6-203ENST00000536871 SLC4A8Q2Y0W8 1093 aa15.43■□□□□ 0.06
SMG6-203ENST00000536871 WWC2Q6AWC2 1192 aa15.43■□□□□ 0.06
SMG6-203ENST00000536871 PPP1R18Q6NYC8 613 aa15.43■□□□□ 0.06
SMG6-203ENST00000536871 HEATR3Q7Z4Q2 680 aa15.43■□□□□ 0.06
SMG6-203ENST00000536871 SLC51AQ86UW1 340 aa15.43■□□□□ 0.06
SMG6-203ENST00000536871 SMAP1Q8IYB5 467 aaPredicted RBP15.43■□□□□ 0.06
SMG6-203ENST00000536871 FBXW7Q969H0 707 aa15.43■□□□□ 0.06
SMG6-203ENST00000536871 GTPBP4Q9BZE4 634 aaKnown RBP15.43■□□□□ 0.06
SMG6-203ENST00000536871 IGKV6D-41A0A0C4DH26 115 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 TTLL1O95922 423 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 KCNJ6P48051 423 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 FANCCQ00597 558 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 GRIN1Q05586 938 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 SPECC1Q5M775 1068 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 FOXP4Q8IVH2 680 aaPredicted RBP15.42■□□□□ 0.06
SMG6-203ENST00000536871 CERS5Q8N5B7 392 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 ZNF622Q969S3 477 aaKnown RBP eCLIP15.42■□□□□ 0.064e-6■■■■□ 24.2
SMG6-203ENST00000536871 AK8Q96MA6 479 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 RIOX1Q9H6W3 641 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 KCND1Q9NSA2 647 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 RMND1Q9NWS8 449 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 R3HCC1Q9Y3T6 440 aaKnown RBP15.42■□□□□ 0.06
SMG6-203ENST00000536871 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.42■□□□□ 0.06
SMG6-203ENST00000536871 VWA3AA6NCI4 1184 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 FAM205CA6NFA0 338 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 CYTH3O43739 400 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 SNHG28P0DPA3 235 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 NAPAP54920 295 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 GPATCH4Q5T3I0 446 aaKnown RBP15.42■□□□□ 0.06
SMG6-203ENST00000536871 DTHD1Q6ZMT9 781 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 DHX58Q96C10 678 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 CUEDC2Q9H467 287 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 MAGEF1Q9HAY2 307 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 IFNKQ9P0W0 207 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 PCDHA6Q9UN73 950 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 PCDHA8Q9Y5H6 950 aa15.42■□□□□ 0.06
SMG6-203ENST00000536871 CDK5RAP2Q96SN8 1893 aa15.41■□□□□ 0.06
SMG6-203ENST00000536871 SERPINC1P01008 464 aa15.41■□□□□ 0.06
SMG6-203ENST00000536871 MCM7P33993 719 aa15.41■□□□□ 0.06
SMG6-203ENST00000536871 CACTINQ8WUQ7 758 aaKnown RBP15.41■□□□□ 0.06
SMG6-203ENST00000536871 PAGE5Q96GU1 130 aa15.41■□□□□ 0.06
SMG6-203ENST00000536871 XPO4Q9C0E2 1151 aaKnown RBP15.41■□□□□ 0.06
SMG6-203ENST00000536871 GLT8D2Q9H1C3 349 aa15.41■□□□□ 0.06
SMG6-203ENST00000536871 PYCARDQ9ULZ3 195 aa15.41■□□□□ 0.06
SMG6-203ENST00000536871 PDHBP11177 359 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms