RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 VEZTQ9HBM0 779 aa17.52■□□□□ 0.4
CHFR-213ENST00000536843 PIH1D3Q9NQM4 214 aaKnown RBP17.52■□□□□ 0.4
CHFR-213ENST00000536843 SAR1BQ9Y6B6 198 aa17.52■□□□□ 0.4
CHFR-213ENST00000536843 SLIT2O94813 1529 aa17.52■□□□□ 0.39
CHFR-213ENST00000536843 UBN2Q6ZU65 1347 aa17.52■□□□□ 0.39
CHFR-213ENST00000536843 NDUFAB1O14561 156 aa17.51■□□□□ 0.39
CHFR-213ENST00000536843 PRC1O43663 620 aa17.51■□□□□ 0.39
CHFR-213ENST00000536843 PLCB4Q15147 1175 aa17.51■□□□□ 0.39
CHFR-213ENST00000536843 ALG1Q9BT22 464 aa17.51■□□□□ 0.39
CHFR-213ENST00000536843 CD248Q9HCU0 757 aa17.51■□□□□ 0.39
CHFR-213ENST00000536843 THRAP3Q9Y2W1 955 aaKnown RBP17.51■□□□□ 0.39
CHFR-213ENST00000536843 SPATA31A6Q5VVP1 1343 aa17.51■□□□□ 0.39
CHFR-213ENST00000536843 ERVV-1B6SEH8 477 aa17.51■□□□□ 0.39
CHFR-213ENST00000536843 OPA1O60313 960 aa17.51■□□□□ 0.39
CHFR-213ENST00000536843 LRCH2Q5VUJ6 765 aa17.51■□□□□ 0.39
CHFR-213ENST00000536843 MICALCLQ6ZW33 695 aa17.51■□□□□ 0.39
CHFR-213ENST00000536843 MB21D2Q8IYB1 491 aaPredicted RBP17.51■□□□□ 0.39
CHFR-213ENST00000536843 CDCA7Q9BWT1 371 aaPredicted RBP17.51■□□□□ 0.39
CHFR-213ENST00000536843 BCCIPQ9P287 314 aaKnown RBP eCLIP17.51■□□□□ 0.39
CHFR-213ENST00000536843 PDE8BO95263 885 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 NF2P35240 595 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 ADD2P35612 726 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 IL6STP40189 918 aaPredicted RBP17.5■□□□□ 0.39
CHFR-213ENST00000536843 SMTNP53814 917 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 KANK3Q6NY19 840 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 ANKRD18AQ8IVF6 992 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 GSPT2Q8IYD1 628 aaKnown RBP17.5■□□□□ 0.39
CHFR-213ENST00000536843 ZNF34Q8IZ26 560 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 HELBQ8NG08 1087 aaPredicted RBP17.5■□□□□ 0.39
CHFR-213ENST00000536843 RUBCNQ92622 972 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.5■□□□□ 0.39
CHFR-213ENST00000536843 RABEP2Q9H5N1 569 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 SERTAD1Q9UHV2 236 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 SPATA31A1Q5TZJ5 1347 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 GCFC2P16383 781 aaKnown RBP17.5■□□□□ 0.39
CHFR-213ENST00000536843 PHKA1P46020 1223 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 MRPL12P52815 198 aaKnown RBP17.5■□□□□ 0.39
CHFR-213ENST00000536843 ANTXR2P58335 489 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 FAXDC2Q96IV6 333 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 ZNF512BQ96KM6 892 aaPredicted RBP17.5■□□□□ 0.39
CHFR-213ENST00000536843 HAUS4Q9H6D7 363 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 WDR19Q8NEZ3 1342 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 SYNRGQ9UMZ2 1314 aa17.5■□□□□ 0.39
CHFR-213ENST00000536843 ZNF213O14771 459 aa17.49■□□□□ 0.39
CHFR-213ENST00000536843 ZMYND10O75800 440 aa17.49■□□□□ 0.39
CHFR-213ENST00000536843 TRIM14Q14142 442 aa17.49■□□□□ 0.39
CHFR-213ENST00000536843 N4BP2L2Q92802 583 aaPredicted RBP17.49■□□□□ 0.39
CHFR-213ENST00000536843 AIFM3Q96NN9 605 aa17.49■□□□□ 0.39
CHFR-213ENST00000536843 SLF1Q9BQI6 1058 aa17.49■□□□□ 0.39
CHFR-213ENST00000536843 KLC4Q9NSK0 619 aa17.49■□□□□ 0.39
CHFR-213ENST00000536843 HDAC6Q9UBN7 1215 aa17.49■□□□□ 0.39
CHFR-213ENST00000536843 RASSF9O75901 435 aa17.49■□□□□ 0.39
CHFR-213ENST00000536843 ATP1A1P05023 1023 aaKnown RBP17.49■□□□□ 0.39
CHFR-213ENST00000536843 ERCC3P19447 782 aa17.49■□□□□ 0.39
CHFR-213ENST00000536843 CUL4BQ13620 913 aa17.49■□□□□ 0.39
CHFR-213ENST00000536843 RAB11FIP4Q86YS3 637 aa17.49■□□□□ 0.39
CHFR-213ENST00000536843 STK11IPQ8N1F8 1099 aa17.49■□□□□ 0.39
CHFR-213ENST00000536843 VCPKMTQ9H867 229 aa17.49■□□□□ 0.39
CHFR-213ENST00000536843 REXO2Q9Y3B8 237 aaKnown RBP17.49■□□□□ 0.39
CHFR-213ENST00000536843 A0A0G2JS52 829 aa17.48■□□□□ 0.39
CHFR-213ENST00000536843 KIF3CO14782 793 aa17.48■□□□□ 0.39
CHFR-213ENST00000536843 POLR2DO15514 142 aaKnown RBP17.48■□□□□ 0.39
CHFR-213ENST00000536843 IDH1O75874 414 aaKnown RBP17.48■□□□□ 0.39
CHFR-213ENST00000536843 EGFL6Q8IUX8 553 aa17.48■□□□□ 0.39
CHFR-213ENST00000536843 NCOA7Q8NI08 942 aa17.48■□□□□ 0.39
CHFR-213ENST00000536843 ODF2LQ9ULJ1 636 aa17.48■□□□□ 0.39
CHFR-213ENST00000536843 GUCA1BQ9UMX6 200 aa17.48■□□□□ 0.39
CHFR-213ENST00000536843 ENC1O14682 589 aa17.48■□□□□ 0.39
CHFR-213ENST00000536843 ACTN4O43707 911 aaKnown RBP17.48■□□□□ 0.39
CHFR-213ENST00000536843 TEX11Q8IYF3 940 aa17.48■□□□□ 0.39
CHFR-213ENST00000536843 GGA2Q9UJY4 613 aa17.48■□□□□ 0.39
CHFR-213ENST00000536843 SPATA31A5Q5VU36 1347 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 SPATA31A7Q8IWB4 1347 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 CDKL5O76039 1030 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 NDUFA10O95299 355 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 PTPREP23469 700 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 ACTN3Q08043 901 aaPredicted RBP17.47■□□□□ 0.39
CHFR-213ENST00000536843 PPP2R5AQ15172 486 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 TTF1Q15361 905 aaPredicted RBP17.47■□□□□ 0.39
CHFR-213ENST00000536843 SPECC1Q5M775 1068 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 SUSD4Q5VX71 490 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 ZNF662Q6ZS27 426 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 RALYLQ86SE5 291 aaKnown RBP17.47■□□□□ 0.39
CHFR-213ENST00000536843 FBXO2Q9UK22 296 aaPredicted RBP17.47■□□□□ 0.39
CHFR-213ENST00000536843 EPN1Q9Y6I3 576 aaPredicted RBP17.47■□□□□ 0.39
CHFR-213ENST00000536843 NAP1L1P55209 391 aaKnown RBP17.47■□□□□ 0.39
CHFR-213ENST00000536843 CRYMQ14894 314 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 ALS2CLQ60I27 953 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 IQCEQ6IPM2 695 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 INTS5Q6P9B9 1019 aaKnown RBP17.47■□□□□ 0.39
CHFR-213ENST00000536843 IQCA1Q86XH1 822 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 GRAMD1CQ8IYS0 662 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 ZNF579Q8NAF0 562 aaKnown RBP17.47■□□□□ 0.39
CHFR-213ENST00000536843 NKX2-3Q8TAU0 364 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 SEC31BQ9NQW1 1179 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 TRIM10Q9UDY6 481 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 DENND2AQ9ULE3 1009 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 WNK3Q9BYP7 1800 aa17.47■□□□□ 0.39
CHFR-213ENST00000536843 ZNF532Q9HCE3 1301 aa17.46■□□□□ 0.39
CHFR-213ENST00000536843 SRGAP2O75044 1071 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms