RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 COX4I2Q96KJ9 171 aa8.73□□□□□ -1.01
CLIP1-207ENST00000536634 UBOX5O94941 541 aa8.72□□□□□ -1.01
CLIP1-207ENST00000536634 RAG1P15918 1043 aa8.72□□□□□ -1.01
CLIP1-207ENST00000536634 CDCP2Q5VXM1 449 aa8.72□□□□□ -1.01
CLIP1-207ENST00000536634 TMEM40Q8WWA1 233 aa8.72□□□□□ -1.01
CLIP1-207ENST00000536634 KREMEN1Q96MU8 473 aa8.72□□□□□ -1.01
CLIP1-207ENST00000536634 CNNM2Q9H8M5 875 aa8.72□□□□□ -1.01
CLIP1-207ENST00000536634 ADGRE2Q9UHX3 823 aa8.72□□□□□ -1.01
CLIP1-207ENST00000536634 PPT2Q9UMR5 302 aa8.72□□□□□ -1.01
CLIP1-207ENST00000536634 FRMPD1Q5SYB0 1578 aa8.72□□□□□ -1.01
CLIP1-207ENST00000536634 MEIS3P2A8K0S8 358 aa8.71□□□□□ -1.02
CLIP1-207ENST00000536634 RGS13O14921 159 aa8.71□□□□□ -1.02
CLIP1-207ENST00000536634 PLCL1Q15111 1095 aa8.71□□□□□ -1.02
CLIP1-207ENST00000536634 NLRC3Q7RTR2 1065 aa8.71□□□□□ -1.02
CLIP1-207ENST00000536634 AGBL5Q8NDL9 886 aa8.71□□□□□ -1.02
CLIP1-207ENST00000536634 RNF141Q8WVD5 230 aa8.71□□□□□ -1.02
CLIP1-207ENST00000536634 ASB11Q8WXH4 323 aa8.71□□□□□ -1.02
CLIP1-207ENST00000536634 KRTAP4-7Q9BYR0 210 aa8.71□□□□□ -1.02
CLIP1-207ENST00000536634 ACBD3Q9H3P7 528 aa8.71□□□□□ -1.02
CLIP1-207ENST00000536634 ATP13A1Q9HD20 1204 aa8.71□□□□□ -1.02
CLIP1-207ENST00000536634 GINM1Q9NU53 330 aa8.71□□□□□ -1.02
CLIP1-207ENST00000536634 ADAMTS6Q9UKP5 1117 aa8.71□□□□□ -1.02
CLIP1-207ENST00000536634 ZNRF3Q9ULT6 936 aa8.71□□□□□ -1.02
CLIP1-207ENST00000536634 RIMS1Q86UR5 1692 aaKnown RBP8.71□□□□□ -1.02
CLIP1-207ENST00000536634 RAPGEF2Q9Y4G8 1499 aa8.7□□□□□ -1.02
CLIP1-207ENST00000536634 WASH4PA8MWX3 477 aa8.7□□□□□ -1.02
CLIP1-207ENST00000536634 RAPGEF3O95398 923 aa8.7□□□□□ -1.02
CLIP1-207ENST00000536634 FUT4P22083 530 aa8.7□□□□□ -1.02
CLIP1-207ENST00000536634 GBP1P32455 592 aa8.7□□□□□ -1.02
CLIP1-207ENST00000536634 HSPA2P54652 639 aa8.7□□□□□ -1.02
CLIP1-207ENST00000536634 IKZF1Q13422 519 aa8.7□□□□□ -1.02
CLIP1-207ENST00000536634 DTWD2Q8NBA8 298 aa8.7□□□□□ -1.02
CLIP1-207ENST00000536634 GPRASP2Q96D09 838 aa8.7□□□□□ -1.02
CLIP1-207ENST00000536634 TGIF2Q9GZN2 237 aa8.7□□□□□ -1.02
CLIP1-207ENST00000536634 NME1P15531 152 aaKnown RBP8.69□□□□□ -1.02
CLIP1-207ENST00000536634 ANGEL2Q5VTE6 544 aaKnown RBP8.69□□□□□ -1.02
CLIP1-207ENST00000536634 CBLL1Q75N03 491 aa8.69□□□□□ -1.02
CLIP1-207ENST00000536634 VWCEQ96DN2 955 aa8.69□□□□□ -1.02
CLIP1-207ENST00000536634 FERD3LQ96RJ6 166 aa8.69□□□□□ -1.02
CLIP1-207ENST00000536634 PRDM7Q9NQW5 492 aa8.69□□□□□ -1.02
CLIP1-207ENST00000536634 ZSWIM5Q9P217 1185 aa8.69□□□□□ -1.02
CLIP1-207ENST00000536634 DISP3Q9P2K9 1392 aa8.69□□□□□ -1.02
CLIP1-207ENST00000536634 ABCA9Q8IUA7 1624 aa8.69□□□□□ -1.02
CLIP1-207ENST00000536634 CTTNBP2Q8WZ74 1663 aa8.69□□□□□ -1.02
CLIP1-207ENST00000536634 TCF3P15923 654 aa8.68□□□□□ -1.02
CLIP1-207ENST00000536634 ZNF792Q3KQV3 632 aa8.68□□□□□ -1.02
CLIP1-207ENST00000536634 CCDC81Q6ZN84 652 aa8.68□□□□□ -1.02
CLIP1-207ENST00000536634 PIWIL2Q8TC59 973 aaKnown RBP8.68□□□□□ -1.02
CLIP1-207ENST00000536634 UBE2FQ969M7 185 aa8.68□□□□□ -1.02
CLIP1-207ENST00000536634 ASPNQ9BXN1 380 aa8.68□□□□□ -1.02
CLIP1-207ENST00000536634 DUSP15Q9H1R2 295 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-207ENST00000536634 MBNL3Q9NUK0 354 aaKnown RBP8.68□□□□□ -1.02
CLIP1-207ENST00000536634 EFR3BQ9Y2G0 817 aa8.68□□□□□ -1.02
CLIP1-207ENST00000536634 SIGLEC1Q9BZZ2 1709 aa8.68□□□□□ -1.02
CLIP1-207ENST00000536634 GJA8P48165 433 aa8.67□□□□□ -1.02
CLIP1-207ENST00000536634 IRAK1P51617 712 aa8.67□□□□□ -1.02
CLIP1-207ENST00000536634 LRRFIP1Q32MZ4 808 aaKnown RBP8.67□□□□□ -1.02
CLIP1-207ENST00000536634 FBXW10Q5XX13 1052 aa8.67□□□□□ -1.02
CLIP1-207ENST00000536634 THAP5Q7Z6K1 395 aa8.67□□□□□ -1.02
CLIP1-207ENST00000536634 RASGRP4Q8TDF6 673 aa8.67□□□□□ -1.02
CLIP1-207ENST00000536634 ARHGEF40Q8TER5 1519 aa8.67□□□□□ -1.02
CLIP1-207ENST00000536634 SLC9A7Q96T83 725 aa8.67□□□□□ -1.02
CLIP1-207ENST00000536634 CCSER2Q9H7U1 834 aa8.67□□□□□ -1.02
CLIP1-207ENST00000536634 ATP10BO94823 1461 aa8.66□□□□□ -1.02
CLIP1-207ENST00000536634 FAM86C2PA6NEL3 165 aa8.66□□□□□ -1.02
CLIP1-207ENST00000536634 TNFRSF10CO14798 259 aa8.66□□□□□ -1.02
CLIP1-207ENST00000536634 RNASE1P07998 156 aaKnown RBP8.66□□□□□ -1.02
CLIP1-207ENST00000536634 ACRP10323 421 aa8.66□□□□□ -1.02
CLIP1-207ENST00000536634 SOX9P48436 509 aa8.66□□□□□ -1.02
CLIP1-207ENST00000536634 ZP2Q05996 745 aa8.66□□□□□ -1.02
CLIP1-207ENST00000536634 TMEM192Q8IY95 271 aa8.66□□□□□ -1.02
CLIP1-207ENST00000536634 ZNF512BQ96KM6 892 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-207ENST00000536634 CARS2Q9HA77 564 aaKnown RBP8.66□□□□□ -1.02
CLIP1-207ENST00000536634 ARID4BQ4LE39 1312 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-207ENST00000536634 SRFP11831 508 aa8.65□□□□□ -1.02
CLIP1-207ENST00000536634 IMPDH2P12268 514 aa8.65□□□□□ -1.02
CLIP1-207ENST00000536634 ERCC5P28715 1186 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-207ENST00000536634 NBPF12Q5TAG4 269 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-207ENST00000536634 RUFY4Q6ZNE9 571 aa8.65□□□□□ -1.02
CLIP1-207ENST00000536634 PI4K2BQ8TCG2 481 aa8.65□□□□□ -1.02
CLIP1-207ENST00000536634 KCNH3Q9ULD8 1083 aa8.65□□□□□ -1.02
CLIP1-207ENST00000536634 GOLGA3Q08378 1498 aa8.64□□□□□ -1.03
CLIP1-207ENST00000536634 NEO1Q92859 1461 aa8.64□□□□□ -1.03
CLIP1-207ENST00000536634 RICTORQ6R327 1708 aa8.64□□□□□ -1.03
CLIP1-207ENST00000536634 SHISA3A0PJX4 238 aa8.64□□□□□ -1.03
CLIP1-207ENST00000536634 CHMP4BP1P59074 171 aa8.64□□□□□ -1.03
CLIP1-207ENST00000536634 COL9A2Q14055 689 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-207ENST00000536634 LCE1DQ5T752 114 aa8.64□□□□□ -1.03
CLIP1-207ENST00000536634 MCTP1Q6DN14 999 aa8.64□□□□□ -1.03
CLIP1-207ENST00000536634 LSRQ86X29 649 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-207ENST00000536634 LRRN4CLQ8ND94 238 aa8.64□□□□□ -1.03
CLIP1-207ENST00000536634 GPR62Q9BZJ7 368 aa8.64□□□□□ -1.03
CLIP1-207ENST00000536634 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.64□□□□□ -1.03
CLIP1-207ENST00000536634 INPP5FQ9Y2H2 1132 aa8.64□□□□□ -1.03
CLIP1-207ENST00000536634 SPATA31D1Q6ZQQ2 1576 aa8.64□□□□□ -1.03
CLIP1-207ENST00000536634 PHLDB1Q86UU1 1377 aa8.63□□□□□ -1.03
CLIP1-207ENST00000536634 ESR1P03372 595 aa8.63□□□□□ -1.03
CLIP1-207ENST00000536634 TAL1P17542 331 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-207ENST00000536634 GAB4Q2WGN9 574 aa8.63□□□□□ -1.03
CLIP1-207ENST00000536634 SLC23A3Q6PIS1 610 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms