RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 EXOC6Q8TAG9 804 aa17.03■□□□□ 0.32
RTN3P1-201ENST00000536295 RWDD1Q9H446 243 aaPredicted RBP17.03■□□□□ 0.32
RTN3P1-201ENST00000536295 NYAP2Q9P242 653 aa17.03■□□□□ 0.32
RTN3P1-201ENST00000536295 EVI5O60447 810 aa17.02■□□□□ 0.32
RTN3P1-201ENST00000536295 HOXC6P09630 235 aa17.02■□□□□ 0.32
RTN3P1-201ENST00000536295 CYP2C19P33261 490 aa17.02■□□□□ 0.32
RTN3P1-201ENST00000536295 PDE4BQ07343 736 aa17.02■□□□□ 0.32
RTN3P1-201ENST00000536295 AAMPQ13685 434 aa17.02■□□□□ 0.32
RTN3P1-201ENST00000536295 FAM47AQ5JRC9 791 aa17.02■□□□□ 0.32
RTN3P1-201ENST00000536295 MROH8Q9H579 483 aa17.02■□□□□ 0.32
RTN3P1-201ENST00000536295 OGDHLQ9ULD0 1010 aa17.02■□□□□ 0.32
RTN3P1-201ENST00000536295 PPP1R9AQ9ULJ8 1098 aa17.02■□□□□ 0.32
RTN3P1-201ENST00000536295 NR2E3Q9Y5X4 410 aa17.02■□□□□ 0.32
RTN3P1-201ENST00000536295 GREB1LQ9C091 1923 aaPredicted RBP17.02■□□□□ 0.31
RTN3P1-201ENST00000536295 IGKV6D-41A0A0C4DH26 115 aa17.01■□□□□ 0.31
RTN3P1-201ENST00000536295 F5H6K3 240 aa17.01■□□□□ 0.31
RTN3P1-201ENST00000536295 STRNO43815 780 aa17.01■□□□□ 0.31
RTN3P1-201ENST00000536295 SLC3A2P08195 630 aaKnown RBP17.01■□□□□ 0.31
RTN3P1-201ENST00000536295 TSPY3P0CV98 308 aa17.01■□□□□ 0.31
RTN3P1-201ENST00000536295 TSPY8P0CW00 308 aa17.01■□□□□ 0.31
RTN3P1-201ENST00000536295 CNGA1P29973 690 aa17.01■□□□□ 0.31
RTN3P1-201ENST00000536295 KLRC3Q07444 240 aa17.01■□□□□ 0.31
RTN3P1-201ENST00000536295 CHRDL2Q6WN34 429 aa17.01■□□□□ 0.31
RTN3P1-201ENST00000536295 CEP95Q96GE4 821 aa17.01■□□□□ 0.31
RTN3P1-201ENST00000536295 NBPF3Q9H094 633 aa17.01■□□□□ 0.31
RTN3P1-201ENST00000536295 C11orf49Q9H6J7 331 aa17.01■□□□□ 0.31
RTN3P1-201ENST00000536295 TRIM6-TRIM34B2RNG4 842 aa17■□□□□ 0.31
RTN3P1-201ENST00000536295 VWA5AO00534 786 aa17■□□□□ 0.31
RTN3P1-201ENST00000536295 FOXP2O15409 715 aa17■□□□□ 0.31
RTN3P1-201ENST00000536295 COBLO75128 1261 aa17■□□□□ 0.31
RTN3P1-201ENST00000536295 NDUFB10O96000 172 aa17■□□□□ 0.31
RTN3P1-201ENST00000536295 IGHDP01880 384 aa17■□□□□ 0.31
RTN3P1-201ENST00000536295 MNX1P50219 401 aaPredicted RBP17■□□□□ 0.31
RTN3P1-201ENST00000536295 CTDSPL2Q05D32 466 aa17■□□□□ 0.31
RTN3P1-201ENST00000536295 VPS53Q5VIR6 699 aa17■□□□□ 0.31
RTN3P1-201ENST00000536295 LHX8Q68G74 356 aa17■□□□□ 0.31
RTN3P1-201ENST00000536295 LRRC47Q8N1G4 583 aaKnown RBP17■□□□□ 0.31
RTN3P1-201ENST00000536295 MTMR4Q9NYA4 1195 aa17■□□□□ 0.31
RTN3P1-201ENST00000536295 ADAMTS5Q9UNA0 930 aa17■□□□□ 0.31
RTN3P1-201ENST00000536295 PARP14Q460N5 1801 aa16.99■□□□□ 0.31
RTN3P1-201ENST00000536295 SLC25A27O95847 323 aa16.99■□□□□ 0.31
RTN3P1-201ENST00000536295 TTLL1O95922 423 aa16.99■□□□□ 0.31
RTN3P1-201ENST00000536295 FCER1AP12319 257 aa16.99■□□□□ 0.31
RTN3P1-201ENST00000536295 TFAP4Q01664 338 aa16.99■□□□□ 0.31
RTN3P1-201ENST00000536295 SMC5Q8IY18 1101 aa16.99■□□□□ 0.31
RTN3P1-201ENST00000536295 NEDD1Q8NHV4 660 aa16.99■□□□□ 0.31
RTN3P1-201ENST00000536295 RILPL2Q969X0 211 aa16.99■□□□□ 0.31
RTN3P1-201ENST00000536295 FAM227BQ96M60 508 aa16.99■□□□□ 0.31
RTN3P1-201ENST00000536295 SLF1Q9BQI6 1058 aa16.99■□□□□ 0.31
RTN3P1-201ENST00000536295 INCENPQ9NQS7 918 aa16.99■□□□□ 0.31
RTN3P1-201ENST00000536295 HELLSQ9NRZ9 838 aa16.99■□□□□ 0.31
RTN3P1-201ENST00000536295 A0A0D9SFI3 127 aa16.98■□□□□ 0.31
RTN3P1-201ENST00000536295 STAT3P40763 770 aa16.98■□□□□ 0.31
RTN3P1-201ENST00000536295 SLC4A3P48751 1232 aa16.98■□□□□ 0.31
RTN3P1-201ENST00000536295 CHD1LQ86WJ1 897 aa16.98■□□□□ 0.31
RTN3P1-201ENST00000536295 RIOX2Q8IUF8 465 aa16.98■□□□□ 0.31
RTN3P1-201ENST00000536295 C7orf61Q8IZ16 206 aa16.98■□□□□ 0.31
RTN3P1-201ENST00000536295 TRPV1Q8NER1 839 aa16.98■□□□□ 0.31
RTN3P1-201ENST00000536295 CHMP4CQ96CF2 233 aa16.98■□□□□ 0.31
RTN3P1-201ENST00000536295 MMP19Q99542 508 aa16.98■□□□□ 0.31
RTN3P1-201ENST00000536295 SLC5A4Q9NY91 659 aa16.98■□□□□ 0.31
RTN3P1-201ENST00000536295 ISY1Q9ULR0 285 aaKnown RBP16.98■□□□□ 0.31
RTN3P1-201ENST00000536295 SUPT16HQ9Y5B9 1047 aaKnown RBP16.98■□□□□ 0.31
RTN3P1-201ENST00000536295 COL11A1P12107 1806 aaPredicted RBP16.98■□□□□ 0.31
RTN3P1-201ENST00000536295 PGK2P07205 417 aa16.97■□□□□ 0.31
RTN3P1-201ENST00000536295 NMIQ13287 307 aaPredicted RBP16.97■□□□□ 0.31
RTN3P1-201ENST00000536295 MCMDC2Q4G0Z9 681 aa16.97■□□□□ 0.31
RTN3P1-201ENST00000536295 OLFML2BQ68BL8 750 aa16.97■□□□□ 0.31
RTN3P1-201ENST00000536295 ABRAQ8N0Z2 381 aa16.97■□□□□ 0.31
RTN3P1-201ENST00000536295 REPS2Q8NFH8 660 aa16.97■□□□□ 0.31
RTN3P1-201ENST00000536295 MKL1Q969V6 931 aa16.97■□□□□ 0.31
RTN3P1-201ENST00000536295 KIFC2Q96AC6 838 aa16.97■□□□□ 0.31
RTN3P1-201ENST00000536295 DDX20Q9UHI6 824 aaKnown RBP16.97■□□□□ 0.31
RTN3P1-201ENST00000536295 ZNF214Q9UL59 606 aaPredicted RBP16.97■□□□□ 0.31
RTN3P1-201ENST00000536295 CTDP1Q9Y5B0 961 aaPredicted RBP16.97■□□□□ 0.31
RTN3P1-201ENST00000536295 ZNF236Q9UL36 1845 aa16.97■□□□□ 0.31
RTN3P1-201ENST00000536295 MYH4Q9Y623 1939 aa16.96■□□□□ 0.31
RTN3P1-201ENST00000536295 TSPY2A6NKD2 308 aa16.96■□□□□ 0.31
RTN3P1-201ENST00000536295 CYBAP13498 195 aa16.96■□□□□ 0.31
RTN3P1-201ENST00000536295 NUCB1Q02818 461 aa16.96■□□□□ 0.31
RTN3P1-201ENST00000536295 KCTD2Q14681 263 aa16.96■□□□□ 0.31
RTN3P1-201ENST00000536295 SLFN13Q68D06 897 aa16.96■□□□□ 0.31
RTN3P1-201ENST00000536295 SNRNP48Q6IEG0 339 aaKnown RBP16.96■□□□□ 0.31
RTN3P1-201ENST00000536295 CPXCR1Q8N123 301 aa16.96■□□□□ 0.31
RTN3P1-201ENST00000536295 PRPF38AQ8NAV1 312 aaKnown RBP16.96■□□□□ 0.31
RTN3P1-201ENST00000536295 MAML3Q96JK9 1138 aa16.96■□□□□ 0.31
RTN3P1-201ENST00000536295 RBM27Q9P2N5 1060 aaKnown RBP16.96■□□□□ 0.31
RTN3P1-201ENST00000536295 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.96■□□□□ 0.31
RTN3P1-201ENST00000536295 PLIN4Q96Q06 1357 aa16.96■□□□□ 0.31
RTN3P1-201ENST00000536295 CEP290O15078 2479 aa16.96■□□□□ 0.31
RTN3P1-201ENST00000536295 PFASO15067 1338 aa16.96■□□□□ 0.3
RTN3P1-201ENST00000536295 RANBP6O60518 1105 aaKnown RBP16.95■□□□□ 0.3
RTN3P1-201ENST00000536295 ZBED4O75132 1171 aa16.95■□□□□ 0.3
RTN3P1-201ENST00000536295 IGHA2P01877 340 aa16.95■□□□□ 0.3
RTN3P1-201ENST00000536295 PRAMEF19Q5SWL8 479 aa16.95■□□□□ 0.3
RTN3P1-201ENST00000536295 ANO1Q5XXA6 986 aa16.95■□□□□ 0.3
RTN3P1-201ENST00000536295 ZNF589Q86UQ0 364 aaPredicted RBP16.95■□□□□ 0.3
RTN3P1-201ENST00000536295 PLEKHM2Q8IWE5 1019 aa16.95■□□□□ 0.3
RTN3P1-201ENST00000536295 GMCL1P1Q8NEA9 526 aa16.95■□□□□ 0.3
RTN3P1-201ENST00000536295 TEX13BQ9BXU2 312 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms