RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 SPTLC2O15270 562 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 MYCP01106 439 aaPredicted RBP6.62□□□□□ -1.35
VPS33A-203ENST00000536212 TUBB4AP04350 444 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 SKILP12757 684 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 ZSCAN20P17040 1043 aaPredicted RBP6.62□□□□□ -1.35
VPS33A-203ENST00000536212 ADORA1P30542 326 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 ADD2P35612 726 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 ME1P48163 572 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 NDUFA8P51970 172 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 NLRP12P59046 1061 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 GUCY1B3Q02153 619 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 KIF23Q02241 960 aaPredicted RBP6.62□□□□□ -1.35
VPS33A-203ENST00000536212 DMTNQ08495 405 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 ARID5BQ14865 1188 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 NCAPHQ15003 741 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 STK38Q15208 465 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 ALX1Q15699 326 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 TPD52L1Q16890 204 aaPredicted RBP6.62□□□□□ -1.35
VPS33A-203ENST00000536212 SWI5Q1ZZU3 235 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 CCDC57Q2TAC2 916 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 TTC39AQ5SRH9 613 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 ANO1Q5XXA6 986 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 CEP135Q66GS9 1140 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 ELOA2Q8IYF1 753 aaPredicted RBP6.62□□□□□ -1.35
VPS33A-203ENST00000536212 CCAR2Q8N163 923 aaKnown RBP6.62□□□□□ -1.35
VPS33A-203ENST00000536212 AOPEPQ8N6M6 819 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 CCDC150Q8NCX0 1101 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 CCDC112Q8NEF3 446 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 DDX17Q92841 729 aaKnown RBP6.62□□□□□ -1.35
VPS33A-203ENST00000536212 MRRFQ96E11 262 aaKnown RBP6.62□□□□□ -1.35
VPS33A-203ENST00000536212 C16orf45Q96MC5 204 aaPredicted RBP6.62□□□□□ -1.35
VPS33A-203ENST00000536212 GTPBP4Q9BZE4 634 aaKnown RBP6.62□□□□□ -1.35
VPS33A-203ENST00000536212 CGNQ9P2M7 1197 aaKnown RBP6.62□□□□□ -1.35
VPS33A-203ENST00000536212 ORC3Q9UBD5 711 aaPredicted RBP6.62□□□□□ -1.35
VPS33A-203ENST00000536212 TUBE1Q9UJT0 475 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 KIAA1024Q9UPX6 916 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 GNEQ9Y223 722 aaKnown RBP6.62□□□□□ -1.35
VPS33A-203ENST00000536212 HPSEQ9Y251 543 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 RIPOR2Q9Y4F9 1068 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 CLIC4Q9Y696 253 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 MYH15Q9Y2K3 1946 aa6.62□□□□□ -1.35
VPS33A-203ENST00000536212 RIC1Q4ADV7 1423 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 ZMYM6O95789 1325 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 KLF18A0A0U1RQI7 1052 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 GOLGA8BA8MQT2 603 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 IKBKBO14920 756 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 MYO1BO43795 1136 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 PPP6R2O75170 966 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 ZNF202O95125 648 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 SLC3A2P08195 630 aaKnown RBP6.61□□□□□ -1.35
VPS33A-203ENST00000536212 ZAP70P43403 619 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 SEC13P55735 322 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 SLC39A14Q15043 492 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 PTPAQ15257 358 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 UBE3CQ15386 1083 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 PTPN14Q15678 1187 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 DPCR1Q3MIW9 517 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 INTS6LQ5JSJ4 861 aaKnown RBP6.61□□□□□ -1.35
VPS33A-203ENST00000536212 CCDC102BQ68D86 513 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 CHST3Q7LGC8 479 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 TEX2Q8IWB9 1127 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 ZBTB38Q8NAP3 1195 aaPredicted RBP6.61□□□□□ -1.35
VPS33A-203ENST00000536212 TPCN2Q8NHX9 752 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 ERO1AQ96HE7 468 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 TMEM87BQ96K49 555 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 SDF4Q9BRK5 362 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 TSEN34Q9BSV6 310 aaKnown RBP6.61□□□□□ -1.35
VPS33A-203ENST00000536212 CARD10Q9BWT7 1032 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 TEX13AQ9BXU3 409 aaPredicted RBP6.61□□□□□ -1.35
VPS33A-203ENST00000536212 FAM53CQ9NYF3 392 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 OGFRQ9NZT2 677 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 KIAA1522Q9P206 1035 aaPredicted RBP6.61□□□□□ -1.35
VPS33A-203ENST00000536212 DDX41Q9UJV9 622 aaKnown RBP6.61□□□□□ -1.35
VPS33A-203ENST00000536212 PCDHGA11Q9Y5H2 935 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 MORC2Q9Y6X9 1032 aaPredicted RBP6.61□□□□□ -1.35
VPS33A-203ENST00000536212 DDX60Q8IY21 1712 aaKnown RBP6.61□□□□□ -1.35
VPS33A-203ENST00000536212 NWD2Q9ULI1 1742 aa6.61□□□□□ -1.35
VPS33A-203ENST00000536212 COL5A2P05997 1499 aaPredicted RBP6.6□□□□□ -1.35
VPS33A-203ENST00000536212 NID2Q14112 1375 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 MAP3K15Q6ZN16 1313 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 STK36Q9NRP7 1315 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 A0A087WWV3 80 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 A0A1B0GVL5 298 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 USP27XA6NNY8 438 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 KIF28PB7ZC32 967 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 SH2B2O14492 632 aaPredicted RBP6.6□□□□□ -1.35
VPS33A-203ENST00000536212 ZNF213O14771 459 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 MSTNO14793 375 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 GPAA1O43292 621 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 WDHD1O75717 1129 aaPredicted RBP6.6□□□□□ -1.35
VPS33A-203ENST00000536212 IL2RBP14784 551 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 PFKFB1P16118 471 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 U2AF2P26368 475 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS33A-203ENST00000536212 TPM4P67936 248 aa6.6□□□□□ -1.35
VPS33A-203ENST00000536212 FKBP4Q02790 459 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS33A-203ENST00000536212 IFIT5Q13325 482 aaKnown RBP6.6□□□□□ -1.35
VPS33A-203ENST00000536212 TTF1Q15361 905 aaPredicted RBP6.6□□□□□ -1.35
VPS33A-203ENST00000536212 SF3A1Q15459 793 aaKnown RBP6.6□□□□□ -1.35
VPS33A-203ENST00000536212 E4F1Q66K89 784 aaPredicted RBP6.6□□□□□ -1.35
VPS33A-203ENST00000536212 OTUD7BQ6GQQ9 843 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms