RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 IL17RBQ9NRM6 502 aa19.49■□□□□ 0.71
ATL3-202ENST00000535789 ADAMTS5Q9UNA0 930 aa19.49■□□□□ 0.71
ATL3-202ENST00000535789 TFAP4Q01664 338 aa19.48■□□□□ 0.71
ATL3-202ENST00000535789 PDE4BQ07343 736 aa19.48■□□□□ 0.71
ATL3-202ENST00000535789 CWC27Q6UX04 472 aaKnown RBP19.48■□□□□ 0.71
ATL3-202ENST00000535789 PLEKHH3Q7Z736 793 aa19.48■□□□□ 0.71
ATL3-202ENST00000535789 TBC1D10CQ8IV04 446 aa19.48■□□□□ 0.71
ATL3-202ENST00000535789 ZNF444Q8N0Y2 327 aaPredicted RBP19.48■□□□□ 0.71
ATL3-202ENST00000535789 SOCS4Q8WXH5 440 aa19.48■□□□□ 0.71
ATL3-202ENST00000535789 MKL1Q969V6 931 aa19.48■□□□□ 0.71
ATL3-202ENST00000535789 GOPCQ9HD26 462 aa19.48■□□□□ 0.71
ATL3-202ENST00000535789 CLIP2Q9UDT6 1046 aa19.48■□□□□ 0.71
ATL3-202ENST00000535789 DNAH12Q6ZR08 3092 aa19.48■□□□□ 0.71
ATL3-202ENST00000535789 F5H6K3 240 aa19.47■□□□□ 0.71
ATL3-202ENST00000535789 HMGCRP04035 888 aa19.47■□□□□ 0.71
ATL3-202ENST00000535789 HAND2P61296 217 aa19.47■□□□□ 0.71
ATL3-202ENST00000535789 KLRC3Q07444 240 aa19.47■□□□□ 0.71
ATL3-202ENST00000535789 GRB14Q14449 540 aa19.47■□□□□ 0.71
ATL3-202ENST00000535789 TMEM132BQ14DG7 1078 aa19.47■□□□□ 0.71
ATL3-202ENST00000535789 SKAP1Q86WV1 359 aa19.47■□□□□ 0.71
ATL3-202ENST00000535789 NUDT12Q9BQG2 462 aa19.47■□□□□ 0.71
ATL3-202ENST00000535789 SPATC1LQ9H0A9 340 aa19.47■□□□□ 0.71
ATL3-202ENST00000535789 RNF208Q9H0X6 261 aa19.47■□□□□ 0.71
ATL3-202ENST00000535789 PAK6Q9NQU5 681 aaPredicted RBP19.47■□□□□ 0.71
ATL3-202ENST00000535789 FLRT1Q9NZU1 646 aa19.47■□□□□ 0.71
ATL3-202ENST00000535789 BIN2Q9UBW5 565 aaPredicted RBP19.47■□□□□ 0.71
ATL3-202ENST00000535789 PPP1R9AQ9ULJ8 1098 aa19.47■□□□□ 0.71
ATL3-202ENST00000535789 LRRC37A2A6NM11 1700 aa19.47■□□□□ 0.71
ATL3-202ENST00000535789 MYH6P13533 1939 aa19.47■□□□□ 0.71
ATL3-202ENST00000535789 ORC4O43929 436 aa19.46■□□□□ 0.71
ATL3-202ENST00000535789 GJB1P08034 283 aa19.46■□□□□ 0.71
ATL3-202ENST00000535789 TSPY3P0CV98 308 aa19.46■□□□□ 0.71
ATL3-202ENST00000535789 TSPY8P0CW00 308 aa19.46■□□□□ 0.71
ATL3-202ENST00000535789 PTPREP23469 700 aa19.46■□□□□ 0.71
ATL3-202ENST00000535789 GJA8P48165 433 aa19.46■□□□□ 0.71
ATL3-202ENST00000535789 UBXN2AP68543 259 aa19.46■□□□□ 0.71
ATL3-202ENST00000535789 MAP3K21Q5TCX8 1036 aa19.46■□□□□ 0.71
ATL3-202ENST00000535789 SAMD1Q6SPF0 538 aaPredicted RBP19.46■□□□□ 0.71
ATL3-202ENST00000535789 UBE2Q1Q7Z7E8 422 aa19.46■□□□□ 0.71
ATL3-202ENST00000535789 ZNF287Q9HBT7 754 aa19.46■□□□□ 0.71
ATL3-202ENST00000535789 HOXC10Q9NYD6 342 aa19.46■□□□□ 0.71
ATL3-202ENST00000535789 NEDD4P46934 1319 aa19.46■□□□□ 0.71
ATL3-202ENST00000535789 CEP290O15078 2479 aa19.45■□□□□ 0.7
ATL3-202ENST00000535789 RAD21O60216 631 aa19.45■□□□□ 0.7
ATL3-202ENST00000535789 TTLL1O95922 423 aa19.45■□□□□ 0.7
ATL3-202ENST00000535789 IGHA2P01877 340 aa19.45■□□□□ 0.7
ATL3-202ENST00000535789 XRCC5P13010 732 aaKnown RBP19.45■□□□□ 0.7
ATL3-202ENST00000535789 ERCC3P19447 782 aa19.45■□□□□ 0.7
ATL3-202ENST00000535789 NOVP48745 357 aa19.45■□□□□ 0.7
ATL3-202ENST00000535789 CCNA1P78396 465 aa19.45■□□□□ 0.7
ATL3-202ENST00000535789 GMCL1P1Q8NEA9 526 aa19.45■□□□□ 0.7
ATL3-202ENST00000535789 NPLOC4Q8TAT6 608 aa19.45■□□□□ 0.7
ATL3-202ENST00000535789 APBA2Q99767 749 aa19.45■□□□□ 0.7
ATL3-202ENST00000535789 DIAPH3Q9NSV4 1193 aa19.45■□□□□ 0.7
ATL3-202ENST00000535789 ZNF214Q9UL59 606 aaPredicted RBP19.45■□□□□ 0.7
ATL3-202ENST00000535789 VWA5AO00534 786 aa19.44■□□□□ 0.7
ATL3-202ENST00000535789 SLC3A2P08195 630 aaKnown RBP19.44■□□□□ 0.7
ATL3-202ENST00000535789 MAP2K5Q13163 448 aa19.44■□□□□ 0.7
ATL3-202ENST00000535789 WDR78Q5VTH9 848 aa19.44■□□□□ 0.7
ATL3-202ENST00000535789 MB21D1Q8N884 522 aa19.44■□□□□ 0.7
ATL3-202ENST00000535789 SHCBP1Q8NEM2 672 aa19.44■□□□□ 0.7
ATL3-202ENST00000535789 U2AF1L4Q8WU68 220 aaKnown RBP19.44■□□□□ 0.7
ATL3-202ENST00000535789 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.44■□□□□ 0.7
ATL3-202ENST00000535789 TSPY2A6NKD2 308 aa19.43■□□□□ 0.7
ATL3-202ENST00000535789 RGS2P41220 211 aa19.43■□□□□ 0.7
ATL3-202ENST00000535789 SYNPO2Q9UMS6 1093 aa19.43■□□□□ 0.7
ATL3-202ENST00000535789 SLC15A5A6NIM6 579 aa19.42■□□□□ 0.7
ATL3-202ENST00000535789 RANBP6O60518 1105 aaKnown RBP19.42■□□□□ 0.7
ATL3-202ENST00000535789 HOXC6P09630 235 aa19.42■□□□□ 0.7
ATL3-202ENST00000535789 PRKAR2AP13861 404 aaKnown RBP19.42■□□□□ 0.7
ATL3-202ENST00000535789 CCDC136Q96JN2 1154 aa19.42■□□□□ 0.7
ATL3-202ENST00000535789 DEFB118Q96PH6 123 aa19.42■□□□□ 0.7
ATL3-202ENST00000535789 SLF1Q9BQI6 1058 aa19.42■□□□□ 0.7
ATL3-202ENST00000535789 CRISPLD2Q9H0B8 497 aa19.42■□□□□ 0.7
ATL3-202ENST00000535789 COBLO75128 1261 aa19.41■□□□□ 0.7
ATL3-202ENST00000535789 SGPL1O95470 568 aa19.41■□□□□ 0.7
ATL3-202ENST00000535789 ZKSCAN1P17029 563 aaPredicted RBP19.41■□□□□ 0.7
ATL3-202ENST00000535789 ADORA2AP29274 412 aa19.41■□□□□ 0.7
ATL3-202ENST00000535789 CACNB2Q08289 660 aaPredicted RBP19.41■□□□□ 0.7
ATL3-202ENST00000535789 PLS1Q14651 629 aa19.41■□□□□ 0.7
ATL3-202ENST00000535789 RRP12Q5JTH9 1297 aaKnown RBP19.41■□□□□ 0.7
ATL3-202ENST00000535789 SLFN13Q68D06 897 aa19.41■□□□□ 0.7
ATL3-202ENST00000535789 CCAR1Q8IX12 1150 aaKnown RBP19.41■□□□□ 0.7
ATL3-202ENST00000535789 STAG1Q8WVM7 1258 aa19.41■□□□□ 0.7
ATL3-202ENST00000535789 CHMP4CQ96CF2 233 aa19.41■□□□□ 0.7
ATL3-202ENST00000535789 HIP1O00291 1037 aa19.4■□□□□ 0.7
ATL3-202ENST00000535789 CCND3P30281 292 aaPredicted RBP19.4■□□□□ 0.7
ATL3-202ENST00000535789 MNX1P50219 401 aaPredicted RBP19.4■□□□□ 0.7
ATL3-202ENST00000535789 AKNAD1Q5T1N1 836 aa19.4■□□□□ 0.7
ATL3-202ENST00000535789 RCSD1Q6JBY9 416 aa19.4■□□□□ 0.7
ATL3-202ENST00000535789 RIOX2Q8IUF8 465 aa19.4■□□□□ 0.7
ATL3-202ENST00000535789 DSCC1Q9BVC3 393 aa19.4■□□□□ 0.7
ATL3-202ENST00000535789 STX8Q9UNK0 236 aa19.4■□□□□ 0.7
ATL3-202ENST00000535789 RIPK3Q9Y572 518 aa19.4■□□□□ 0.7
ATL3-202ENST00000535789 RPTORQ8N122 1335 aa19.4■□□□□ 0.7
ATL3-202ENST00000535789 CHMLP26374 656 aa19.39■□□□□ 0.69
ATL3-202ENST00000535789 MFAP1P55081 439 aaKnown RBP19.39■□□□□ 0.69
ATL3-202ENST00000535789 NCAPG2Q86XI2 1143 aa19.39■□□□□ 0.69
ATL3-202ENST00000535789 IVNS1ABPQ9Y6Y0 642 aa19.39■□□□□ 0.69
ATL3-202ENST00000535789 BMP3P12645 472 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms