RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SLC44A5Q8NCS7 719 aa12.12□□□□□ -0.47
CLSTN3-203ENST00000534830 TRIM43Q96BQ3 446 aaPredicted RBP12.12□□□□□ -0.47
CLSTN3-203ENST00000534830 DYNLL2Q96FJ2 89 aa12.12□□□□□ -0.47
CLSTN3-203ENST00000534830 ASB2Q96Q27 587 aa12.12□□□□□ -0.47
CLSTN3-203ENST00000534830 BCL11AQ9H165 835 aa12.12□□□□□ -0.47
CLSTN3-203ENST00000534830 ZNF576Q9H609 170 aa12.12□□□□□ -0.47
CLSTN3-203ENST00000534830 THEGQ9P2T0 379 aa12.12□□□□□ -0.47
CLSTN3-203ENST00000534830 RABGAP1Q9Y3P9 1069 aa12.12□□□□□ -0.47
CLSTN3-203ENST00000534830 CCNA1P78396 465 aa12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 ZYXQ15942 572 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 KIAA1755Q5JYT7 1200 aa12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 ANO1Q5XXA6 986 aa12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 ZSCAN25Q6NSZ9 544 aa12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 CTR9Q6PD62 1173 aa12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 TMEM179Q6ZVK1 233 aa12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 C16orf86Q6ZW13 317 aa12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 KBTBD3Q8NAB2 608 aa12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 TRPV1Q8NER1 839 aa12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 FERMT2Q96AC1 680 aa12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 STRBPQ96SI9 672 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 GAS2L1Q99501 681 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 ARIH1Q9Y4X5 557 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 ZNFX1Q9P2E3 1918 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 A0A0G2JMZ2 1700 aa12.11□□□□□ -0.47
CLSTN3-203ENST00000534830 CYP2D7A0A087X1C5 515 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 SLC15A5A6NIM6 579 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 USP17L12C9JPN9 530 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 USP17L21D6R901 530 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 AKR1B1P15121 316 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 PTPREP23469 700 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 ADCYAP1R1P41586 468 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 CDK8P49336 464 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 EPHB4P54760 987 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 MRPS5P82675 430 aaKnown RBP12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 NPLOC4Q8TAT6 608 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 OSBP2Q969R2 916 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 TIFAQ96CG3 184 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 CCDC17Q96LX7 622 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 FEZ1Q99689 392 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 RPAP3Q9H6T3 665 aaPredicted RBP12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 BTBD7Q9P203 1132 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 SLC4A4Q9Y6R1 1079 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 IVNS1ABPQ9Y6Y0 642 aa12.1□□□□□ -0.47
CLSTN3-203ENST00000534830 COL11A1P12107 1806 aaPredicted RBP12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 GSG1L2A8MUP6 293 aa12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 IGHA2P01877 340 aa12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 ITGB8P26012 769 aa12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 RRP1P56182 461 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 TLE2Q04725 743 aa12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 SNX17Q15036 470 aa12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 CCDC85BQ15834 202 aaPredicted RBP12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 SBK1Q52WX2 424 aa12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 TSHZ3Q63HK5 1081 aa12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 GIMAP6Q6P9H5 292 aa12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 TMX2Q9Y320 296 aa12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 TACC3Q9Y6A5 838 aa12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 TTC41PQ6P2S7 1318 aa12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 SALL3Q9BXA9 1300 aa12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 TCF20Q9UGU0 1960 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-203ENST00000534830 MPHOSPH10O00566 681 aaKnown RBP12.08□□□□□ -0.48
CLSTN3-203ENST00000534830 RNF113AO15541 343 aaKnown RBP12.08□□□□□ -0.48
CLSTN3-203ENST00000534830 CYBAP13498 195 aa12.08□□□□□ -0.48
CLSTN3-203ENST00000534830 RAG1P15918 1043 aa12.08□□□□□ -0.48
CLSTN3-203ENST00000534830 COG2Q14746 738 aa12.08□□□□□ -0.48
CLSTN3-203ENST00000534830 PI4K2BQ8TCG2 481 aa12.08□□□□□ -0.48
CLSTN3-203ENST00000534830 APPBP2Q92624 585 aa12.08□□□□□ -0.48
CLSTN3-203ENST00000534830 C1QTNF1Q9BXJ1 281 aa12.08□□□□□ -0.48
CLSTN3-203ENST00000534830 PRDM12Q9H4Q4 367 aa12.08□□□□□ -0.48
CLSTN3-203ENST00000534830 HOXC10Q9NYD6 342 aa12.08□□□□□ -0.48
CLSTN3-203ENST00000534830 ZNF236Q9UL36 1845 aa12.08□□□□□ -0.48
CLSTN3-203ENST00000534830 CLTBP09497 229 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 HOXC6P09630 235 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 DSG3P32926 999 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 ICA1Q05084 483 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 FPGSQ05932 587 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 GRB14Q14449 540 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 AKNAD1Q5T1N1 836 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 CCDC129Q6ZRS4 1044 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 DPP9Q86TI2 863 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 CLEC10AQ8IUN9 316 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 GPATCH3Q96I76 525 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 NECAB3Q96P71 396 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 VCPKMTQ9H867 229 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 ARPP21Q9UBL0 812 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 HCN4Q9Y3Q4 1203 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 MYH4Q9Y623 1939 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 SYNGAP1Q96PV0 1343 aa12.07□□□□□ -0.48
CLSTN3-203ENST00000534830 ROBO3Q96MS0 1386 aa12.06□□□□□ -0.48
CLSTN3-203ENST00000534830 SEPT4O43236 478 aa12.06□□□□□ -0.48
CLSTN3-203ENST00000534830 PQBP1O60828 265 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-203ENST00000534830 ZFYP08048 801 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-203ENST00000534830 IGFBP4P22692 258 aa12.06□□□□□ -0.48
CLSTN3-203ENST00000534830 LRRC41Q15345 812 aa12.06□□□□□ -0.48
CLSTN3-203ENST00000534830 C1orf53Q5VUE5 145 aa12.06□□□□□ -0.48
CLSTN3-203ENST00000534830 AMOTL1Q8IY63 956 aa12.06□□□□□ -0.48
CLSTN3-203ENST00000534830 OTUD7AQ8TE49 926 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms