RNA–Protein interactions for RNA: ENST00000534343.1

RRP8-205, Transcript of ribosomal RNA processing 8, humanhuman

TSL 2 BASIC

Gene RRP8, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-205ENST00000534343 KLHDC9Q8NEP7 349 aa12.24□□□□□ -0.45
RRP8-205ENST00000534343 REPS2Q8NFH8 660 aa12.24□□□□□ -0.45
RRP8-205ENST00000534343 FERMT2Q96AC1 680 aa12.24□□□□□ -0.45
RRP8-205ENST00000534343 CRNKL1Q9BZJ0 848 aaKnown RBP12.24□□□□□ -0.45
RRP8-205ENST00000534343 TANGO6Q9C0B7 1094 aa12.24□□□□□ -0.45
RRP8-205ENST00000534343 SH2D4AQ9H788 454 aa12.24□□□□□ -0.45
RRP8-205ENST00000534343 MCM9Q9NXL9 1143 aa12.24□□□□□ -0.45
RRP8-205ENST00000534343 TBX21Q9UL17 535 aa12.24□□□□□ -0.45
RRP8-205ENST00000534343 ZNF214Q9UL59 606 aaPredicted RBP12.24□□□□□ -0.45
RRP8-205ENST00000534343 ZNFX1Q9P2E3 1918 aaKnown RBP12.23□□□□□ -0.45
RRP8-205ENST00000534343 MOXD2PA6NHM9 499 aa12.23□□□□□ -0.45
RRP8-205ENST00000534343 FLOT1O75955 427 aa12.23□□□□□ -0.45
RRP8-205ENST00000534343 AKR1A1P14550 325 aa12.23□□□□□ -0.45
RRP8-205ENST00000534343 RAG1P15918 1043 aa12.23□□□□□ -0.45
RRP8-205ENST00000534343 PDE6AP16499 860 aa12.23□□□□□ -0.45
RRP8-205ENST00000534343 DNAJB2P25686 324 aa12.23□□□□□ -0.45
RRP8-205ENST00000534343 COPB2P35606 906 aa12.23□□□□□ -0.45
RRP8-205ENST00000534343 FPGSQ05932 587 aa12.23□□□□□ -0.45
RRP8-205ENST00000534343 ZKSCAN2Q63HK3 967 aa12.23□□□□□ -0.45
RRP8-205ENST00000534343 MAMDC4Q6UXC1 1216 aa12.23□□□□□ -0.45
RRP8-205ENST00000534343 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.23□□□□□ -0.45
RRP8-205ENST00000534343 NCAPG2Q86XI2 1143 aa12.23□□□□□ -0.45
RRP8-205ENST00000534343 CCDC17Q96LX7 622 aa12.23□□□□□ -0.45
RRP8-205ENST00000534343 PGK1P00558 417 aa12.22□□□□□ -0.45
RRP8-205ENST00000534343 TAL1P17542 331 aaPredicted RBP12.22□□□□□ -0.45
RRP8-205ENST00000534343 CST5P28325 142 aaPredicted RBP12.22□□□□□ -0.45
RRP8-205ENST00000534343 CDK7P50613 346 aa12.22□□□□□ -0.45
RRP8-205ENST00000534343 ICA1Q05084 483 aa12.22□□□□□ -0.45
RRP8-205ENST00000534343 AKNAD1Q5T1N1 836 aa12.22□□□□□ -0.45
RRP8-205ENST00000534343 FRAT1Q92837 279 aaPredicted RBP12.22□□□□□ -0.45
RRP8-205ENST00000534343 ZNF576Q9H609 170 aa12.22□□□□□ -0.45
RRP8-205ENST00000534343 ARHGEF10LQ9HCE6 1279 aa12.22□□□□□ -0.45
RRP8-205ENST00000534343 CHD9Q3L8U1 2897 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 PLXNA1Q9UIW2 1896 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 COL11A1P12107 1806 aaPredicted RBP12.21□□□□□ -0.45
RRP8-205ENST00000534343 ELP1O95163 1332 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 SYNGAP1Q96PV0 1343 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 ZNF532Q9HCE3 1301 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 SYNRGQ9UMZ2 1314 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 DNAJC25-GNG10A0A024R161 153 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 TNFRSF10AO00220 468 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 VWA5AO00534 786 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 MPHOSPH10O00566 681 aaKnown RBP12.21□□□□□ -0.45
RRP8-205ENST00000534343 TIMP1P01033 207 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 AKR1B1P15121 316 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 ACLYP53396 1101 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 NKX3-2P78367 333 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 KCTD2Q14681 263 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 SLC9C2Q5TAH2 1124 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 C12orf60Q5U649 245 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 MFSD5Q6N075 450 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 CEP85Q6P2H3 762 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 C16orf59Q7L2K0 433 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 ZNF467Q7Z7K2 595 aaPredicted RBP12.21□□□□□ -0.45
RRP8-205ENST00000534343 ERC1Q8IUD2 1116 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 LCORLQ8N3X6 602 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 SLC44A5Q8NCS7 719 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 SDR42E1Q8WUS8 393 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 ATXN2LQ8WWM7 1075 aaKnown RBP12.21□□□□□ -0.45
RRP8-205ENST00000534343 MMP19Q99542 508 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 ATP8A2Q9NTI2 1148 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 TMEM39AQ9NV64 488 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 PPP1R9AQ9ULJ8 1098 aa12.21□□□□□ -0.45
RRP8-205ENST00000534343 GREB1LQ9C091 1923 aaPredicted RBP12.21□□□□□ -0.46
RRP8-205ENST00000534343 ZBED9Q6R2W3 1325 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 DCDC2CA8MYV0 355 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 ATP2A1O14983 1001 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 PQBP1O60828 265 aaKnown RBP12.2□□□□□ -0.46
RRP8-205ENST00000534343 PGK2P07205 417 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 CYP2D6P10635 497 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 STAT3P40763 770 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 PLS1Q14651 629 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 C16orf86Q6ZW13 317 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 AACSQ86V21 672 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 CLEC10AQ8IUN9 316 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 SPICE1Q8N0Z3 855 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 NUP133Q8WUM0 1156 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 TIFAQ96CG3 184 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 DYNLL2Q96FJ2 89 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.2□□□□□ -0.467e-7■□□□□ 8.5
RRP8-205ENST00000534343 C1orf115Q9H7X2 142 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 KANSL2Q9H9L4 492 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 STARD7Q9NQZ5 370 aa12.2□□□□□ -0.46
RRP8-205ENST00000534343 MROH7Q68CQ1 1323 aa12.19□□□□□ -0.46
RRP8-205ENST00000534343 CCER2I3L3R5 266 aa12.19□□□□□ -0.46
RRP8-205ENST00000534343 DUSP11O75319 330 aaKnown RBP12.19□□□□□ -0.46
RRP8-205ENST00000534343 SNAI1O95863 264 aaPredicted RBP12.19□□□□□ -0.46
RRP8-205ENST00000534343 CDK8P49336 464 aa12.19□□□□□ -0.46
RRP8-205ENST00000534343 TMEM240Q5SV17 173 aa12.19□□□□□ -0.46
RRP8-205ENST00000534343 UPF3AQ9H1J1 476 aaKnown RBP12.19□□□□□ -0.46
RRP8-205ENST00000534343 FBXO28Q9NVF7 368 aa12.19□□□□□ -0.46
RRP8-205ENST00000534343 CNPY2Q9Y2B0 182 aa12.19□□□□□ -0.46
RRP8-205ENST00000534343 NCOR1O75376 2440 aa12.19□□□□□ -0.46
RRP8-205ENST00000534343 MYH8P13535 1937 aa12.19□□□□□ -0.46
RRP8-205ENST00000534343 MYCNP04198 464 aaPredicted RBP12.18□□□□□ -0.46
RRP8-205ENST00000534343 RLBP1P12271 317 aa12.18□□□□□ -0.46
RRP8-205ENST00000534343 EEF2P13639 858 aaKnown RBP12.18□□□□□ -0.46
RRP8-205ENST00000534343 COL9A1P20849 921 aa12.18□□□□□ -0.46
RRP8-205ENST00000534343 PPIGQ13427 754 aaKnown RBP eCLIP12.18□□□□□ -0.46
RRP8-205ENST00000534343 HSP90AB4PQ58FF6 505 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms