RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 ATG4CQ96DT6 458 aa16.77■□□□□ 0.28
SF3B2-215ENST00000534307 MOV10L1Q9BXT6 1211 aaKnown RBP16.77■□□□□ 0.28
SF3B2-215ENST00000534307 NAPBQ9H115 298 aa16.77■□□□□ 0.28
SF3B2-215ENST00000534307 OSBPL3Q9H4L5 887 aa16.77■□□□□ 0.28
SF3B2-215ENST00000534307 ADAMTS5Q9UNA0 930 aa16.77■□□□□ 0.28
SF3B2-215ENST00000534307 COL11A1P12107 1806 aaPredicted RBP16.77■□□□□ 0.27
SF3B2-215ENST00000534307 RPTORQ8N122 1335 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 MUC3AQ02505 3323 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 SLC15A5A6NIM6 579 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 EVI5O60447 810 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 PRDM1O75626 825 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 IGHA2P01877 340 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 HOXC6P09630 235 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 CAPN2P17655 700 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 PTPREP23469 700 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 ATP2B2Q01814 1243 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 PPARAQ07869 468 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 CCL14Q16627 93 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 B4GALNT3Q6L9W6 998 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 PLEKHM2Q8IWE5 1019 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 SHCBP1Q8NEM2 672 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 SPATC1LQ9H0A9 340 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 ZNF287Q9HBT7 754 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 GOPCQ9HD26 462 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 HELLSQ9NRZ9 838 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 FBXO28Q9NVF7 368 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 MYH4Q9Y623 1939 aa16.76■□□□□ 0.27
SF3B2-215ENST00000534307 A0A0D9SFI3 127 aa16.75■□□□□ 0.27
SF3B2-215ENST00000534307 ZKSCAN1P17029 563 aaPredicted RBP16.75■□□□□ 0.27
SF3B2-215ENST00000534307 VPS53Q5VIR6 699 aa16.75■□□□□ 0.27
SF3B2-215ENST00000534307 MKL1Q969V6 931 aa16.75■□□□□ 0.27
SF3B2-215ENST00000534307 CEP95Q96GE4 821 aa16.75■□□□□ 0.27
SF3B2-215ENST00000534307 FAM227BQ96M60 508 aa16.75■□□□□ 0.27
SF3B2-215ENST00000534307 HMX1Q9NP08 348 aaPredicted RBP16.75■□□□□ 0.27
SF3B2-215ENST00000534307 PRKAR2AP13861 404 aaKnown RBP16.74■□□□□ 0.27
SF3B2-215ENST00000534307 ERCC3P19447 782 aa16.74■□□□□ 0.27
SF3B2-215ENST00000534307 CACNB2Q08289 660 aaPredicted RBP16.74■□□□□ 0.27
SF3B2-215ENST00000534307 TMEM132BQ14DG7 1078 aa16.74■□□□□ 0.27
SF3B2-215ENST00000534307 ALX1Q15699 326 aa16.74■□□□□ 0.27
SF3B2-215ENST00000534307 ZNF444Q8N0Y2 327 aaPredicted RBP16.74■□□□□ 0.27
SF3B2-215ENST00000534307 NEDD1Q8NHV4 660 aa16.74■□□□□ 0.27
SF3B2-215ENST00000534307 MTMR4Q9NYA4 1195 aa16.74■□□□□ 0.27
SF3B2-215ENST00000534307 FLRT1Q9NZU1 646 aa16.74■□□□□ 0.27
SF3B2-215ENST00000534307 PPP1R9AQ9ULJ8 1098 aa16.74■□□□□ 0.27
SF3B2-215ENST00000534307 SYNPO2Q9UMS6 1093 aa16.74■□□□□ 0.27
SF3B2-215ENST00000534307 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.74■□□□□ 0.27
SF3B2-215ENST00000534307 F5H6K3 240 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 NDUFB10O96000 172 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 TFRCP02786 760 aaKnown RBP16.73■□□□□ 0.27
SF3B2-215ENST00000534307 PDE4BQ07343 736 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 KLRC3Q07444 240 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 MCMDC2Q4G0Z9 681 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 FAM83BQ5T0W9 1011 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 WDR78Q5VTH9 848 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 GPR153Q6NV75 609 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 Q7L0L9 218 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 REPS2Q8NFH8 660 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 NPLOC4Q8TAT6 608 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 NUP88Q99567 741 aaPredicted RBP16.73■□□□□ 0.27
SF3B2-215ENST00000534307 GDF15Q99988 308 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 ANAPC4Q9UJX5 808 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 TACC3Q9Y6A5 838 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 IVNS1ABPQ9Y6Y0 642 aa16.73■□□□□ 0.27
SF3B2-215ENST00000534307 VWA5AO00534 786 aa16.72■□□□□ 0.27
SF3B2-215ENST00000534307 STRNO43815 780 aa16.72■□□□□ 0.27
SF3B2-215ENST00000534307 SLC3A2P08195 630 aaKnown RBP16.72■□□□□ 0.27
SF3B2-215ENST00000534307 FGRP09769 529 aa16.72■□□□□ 0.27
SF3B2-215ENST00000534307 ZNF589Q86UQ0 364 aaPredicted RBP16.72■□□□□ 0.27
SF3B2-215ENST00000534307 DEFB123Q8N688 67 aa16.72■□□□□ 0.27
SF3B2-215ENST00000534307 GMCL1P1Q8NEA9 526 aa16.72■□□□□ 0.27
SF3B2-215ENST00000534307 MROH8Q9H579 483 aa16.72■□□□□ 0.27
SF3B2-215ENST00000534307 CWC22Q9HCG8 908 aaKnown RBP16.72■□□□□ 0.27
SF3B2-215ENST00000534307 CLIP2Q9UDT6 1046 aa16.72■□□□□ 0.27
SF3B2-215ENST00000534307 ZNF214Q9UL59 606 aaPredicted RBP16.72■□□□□ 0.27
SF3B2-215ENST00000534307 FRMPD3Q5JV73 1810 aa16.72■□□□□ 0.27
SF3B2-215ENST00000534307 ZMYM6O95789 1325 aa16.71■□□□□ 0.27
SF3B2-215ENST00000534307 TTLL1O95922 423 aa16.71■□□□□ 0.27
SF3B2-215ENST00000534307 ADORA2AP29274 412 aa16.71■□□□□ 0.27
SF3B2-215ENST00000534307 NMIQ13287 307 aaPredicted RBP16.71■□□□□ 0.27
SF3B2-215ENST00000534307 FAM47AQ5JRC9 791 aa16.71■□□□□ 0.27
SF3B2-215ENST00000534307 ABRAQ8N0Z2 381 aa16.71■□□□□ 0.27
SF3B2-215ENST00000534307 ANKLE1Q8NAG6 615 aa16.71■□□□□ 0.27
SF3B2-215ENST00000534307 OGDHLQ9ULD0 1010 aa16.71■□□□□ 0.27
SF3B2-215ENST00000534307 TRIM6-TRIM34B2RNG4 842 aa16.7■□□□□ 0.26
SF3B2-215ENST00000534307 COBLO75128 1261 aa16.7■□□□□ 0.26
SF3B2-215ENST00000534307 FGAP02671 866 aa16.7■□□□□ 0.26
SF3B2-215ENST00000534307 TSPY3P0CV98 308 aa16.7■□□□□ 0.26
SF3B2-215ENST00000534307 TSPY8P0CW00 308 aa16.7■□□□□ 0.26
SF3B2-215ENST00000534307 HSPD1P10809 573 aaKnown RBP16.7■□□□□ 0.26
SF3B2-215ENST00000534307 CCND3P30281 292 aaPredicted RBP16.7■□□□□ 0.26
SF3B2-215ENST00000534307 BMP8BP34820 402 aa16.7■□□□□ 0.26
SF3B2-215ENST00000534307 TFAP4Q01664 338 aa16.7■□□□□ 0.26
SF3B2-215ENST00000534307 CTDSPL2Q05D32 466 aa16.7■□□□□ 0.26
SF3B2-215ENST00000534307 PLS1Q14651 629 aa16.7■□□□□ 0.26
SF3B2-215ENST00000534307 LHX8Q68G74 356 aa16.7■□□□□ 0.26
SF3B2-215ENST00000534307 LRRC47Q8N1G4 583 aaKnown RBP16.7■□□□□ 0.26
SF3B2-215ENST00000534307 DIS3LQ8TF46 1054 aaKnown RBP16.7■□□□□ 0.26
SF3B2-215ENST00000534307 INCENPQ9NQS7 918 aa16.7■□□□□ 0.26
SF3B2-215ENST00000534307 STXBP5LQ9Y2K9 1186 aa16.7■□□□□ 0.26
SF3B2-215ENST00000534307 CCDC171Q6TFL3 1326 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms