RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 CALM2P0DP24 149 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 CALM3P0DP25 149 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 CDK8P49336 464 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 HMGN5P82970 282 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 MAP3K11Q16584 847 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 TATDN1Q6P1N9 297 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 CHST3Q7LGC8 479 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 KLRG1Q96E93 195 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 DYNLL2Q96FJ2 89 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 ZSCAN10Q96SZ4 725 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 LRRC2Q9BYS8 371 aa12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCDC90B-218ENST00000533761 TRPM7Q96QT4 1865 aa12.76□□□□□ -0.37
CCDC90B-218ENST00000533761 SSC5DA1L4H1 1573 aa12.76□□□□□ -0.37
CCDC90B-218ENST00000533761 KLF18A0A0U1RQI7 1052 aa12.76□□□□□ -0.37
CCDC90B-218ENST00000533761 TMEM88BA6NKF7 163 aa12.76□□□□□ -0.37
CCDC90B-218ENST00000533761 FAM196BA6NMK8 535 aa12.76□□□□□ -0.37
CCDC90B-218ENST00000533761 CTNND1O60716 968 aaKnown RBP12.76□□□□□ -0.37
CCDC90B-218ENST00000533761 ANTXR2P58335 489 aa12.76□□□□□ -0.37
CCDC90B-218ENST00000533761 IFIT1BQ5T764 474 aaKnown RBP12.76□□□□□ -0.37
CCDC90B-218ENST00000533761 CCDC83Q8IWF9 413 aa12.76□□□□□ -0.37
CCDC90B-218ENST00000533761 ANKRD13AQ8IZ07 590 aa12.76□□□□□ -0.37
CCDC90B-218ENST00000533761 CCDC17Q96LX7 622 aa12.76□□□□□ -0.37
CCDC90B-218ENST00000533761 WRNIP1Q96S55 665 aa12.76□□□□□ -0.37
CCDC90B-218ENST00000533761 DNAJC18Q9H819 358 aa12.76□□□□□ -0.37
CCDC90B-218ENST00000533761 ZNF112Q9UJU3 913 aa12.76□□□□□ -0.37
CCDC90B-218ENST00000533761 TNKSO95271 1327 aa12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 PHF20L1A8MW92 1017 aa12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 SMIM22K7EJ46 135 aa12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 ZBTB43O43298 467 aa12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 SHMT1P34896 483 aa12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 METAP2P50579 478 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 APOBRQ0VD83 1088 aa12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 CERKLQ49MI3 558 aaPredicted RBP12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 CYB5R4Q7L1T6 521 aa12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 CATIPQ7Z7H3 387 aa12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 STK11IPQ8N1F8 1099 aa12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 SLC44A5Q8NCS7 719 aa12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 IGDCC4Q8TDY8 1250 aa12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 IL21Q9HBE4 155 aa12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 FZD1Q9UP38 647 aa12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 CSADQ9Y600 493 aa12.75□□□□□ -0.37
CCDC90B-218ENST00000533761 PRDM1O75626 825 aa12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 SLURP2P0DP57 97 aa12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 PDIA3P30101 505 aaKnown RBP12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 CAP2P40123 477 aa12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 APLP1P51693 650 aa12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 STK3Q13188 491 aa12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 LDLRAD1Q5T700 205 aa12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 DGKHQ86XP1 1220 aa12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 FAM184AQ8NB25 1140 aa12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 LY9Q9HBG7 655 aa12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 GINM1Q9NU53 330 aa12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 TCP11L1Q9NUJ3 509 aa12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 PAPPA2Q9BXP8 1791 aa12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 SIPA1L1O43166 1804 aa12.74□□□□□ -0.37
CCDC90B-218ENST00000533761 UBE2Q2LH0YL09 131 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 ASNSP08243 561 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 TFAP4Q01664 338 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 ABCB5Q2M3G0 1257 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 APOA5Q6Q788 366 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 MOB2Q70IA6 237 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 SAPCD2Q86UD0 394 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 ZKSCAN4Q969J2 545 aaPredicted RBP12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 LARP6Q9BRS8 491 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 CABP5Q9NP86 173 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 PICK1Q9NRD5 415 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 ABT1Q9ULW3 272 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 ATP6V1DQ9Y5K8 247 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 WDR33Q9C0J8 1336 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 MPHOSPH10O00566 681 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 DDAH1O94760 285 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 INPP5BP32019 993 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 DDIT3P35638 169 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 HUNKP57058 714 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 SLC10A4Q96EP9 437 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 GBP4Q96PP9 640 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 KAT14Q9H8E8 782 aa12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 RBM28Q9NW13 759 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-218ENST00000533761 GOLGA8AA7E2F4 631 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 LARGE1O95461 756 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 RASA1P20936 1047 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 GJB2P29033 226 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 KIF5BP33176 963 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 C1QTNF8P60827 252 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 SCRN1Q12765 414 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 VGLL4Q14135 290 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 NOL9Q5SY16 702 aaKnown RBP12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 TMEM179Q6ZVK1 233 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 MICU3Q86XE3 530 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 SCYL3Q8IZE3 742 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 ENAHQ8N8S7 591 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 NECAB1Q8N987 351 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 MTRQ99707 1265 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 INCENPQ9NQS7 918 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 TLL2Q9Y6L7 1015 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 NID2Q14112 1375 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms