RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 DIS3LQ8TF46 1054 aaKnown RBP18.4■□□□□ 0.54
CPSF1-211ENST00000533492 FBXO28Q9NVF7 368 aa18.4■□□□□ 0.54
CPSF1-211ENST00000533492 FLRT1Q9NZU1 646 aa18.4■□□□□ 0.54
CPSF1-211ENST00000533492 CLIP2Q9UDT6 1046 aa18.4■□□□□ 0.54
CPSF1-211ENST00000533492 COLQQ9Y215 455 aaPredicted RBP18.4■□□□□ 0.54
CPSF1-211ENST00000533492 RLFQ13129 1914 aa18.39■□□□□ 0.53
CPSF1-211ENST00000533492 F5H6K3 240 aa18.39■□□□□ 0.53
CPSF1-211ENST00000533492 SLC25A27O95847 323 aa18.39■□□□□ 0.53
CPSF1-211ENST00000533492 ADORA2AP29274 412 aa18.39■□□□□ 0.53
CPSF1-211ENST00000533492 KLRC3Q07444 240 aa18.39■□□□□ 0.53
CPSF1-211ENST00000533492 B4GALNT3Q6L9W6 998 aa18.39■□□□□ 0.53
CPSF1-211ENST00000533492 LNPKQ9C0E8 428 aa18.39■□□□□ 0.53
CPSF1-211ENST00000533492 PPP1R9AQ9ULJ8 1098 aa18.39■□□□□ 0.53
CPSF1-211ENST00000533492 TSPY3P0CV98 308 aa18.38■□□□□ 0.53
CPSF1-211ENST00000533492 TSPY8P0CW00 308 aa18.38■□□□□ 0.53
CPSF1-211ENST00000533492 CNGA1P29973 690 aa18.38■□□□□ 0.53
CPSF1-211ENST00000533492 PPARAQ07869 468 aa18.38■□□□□ 0.53
CPSF1-211ENST00000533492 TMEM132BQ14DG7 1078 aa18.38■□□□□ 0.53
CPSF1-211ENST00000533492 CCDC129Q6ZRS4 1044 aa18.38■□□□□ 0.53
CPSF1-211ENST00000533492 C11orf49Q9H6J7 331 aa18.38■□□□□ 0.53
CPSF1-211ENST00000533492 ADAMTS5Q9UNA0 930 aa18.38■□□□□ 0.53
CPSF1-211ENST00000533492 VWA5AO00534 786 aa18.37■□□□□ 0.53
CPSF1-211ENST00000533492 FCER1AP12319 257 aa18.37■□□□□ 0.53
CPSF1-211ENST00000533492 CYP2C19P33261 490 aa18.37■□□□□ 0.53
CPSF1-211ENST00000533492 STAT3P40763 770 aa18.37■□□□□ 0.53
CPSF1-211ENST00000533492 CHRDL2Q6WN34 429 aa18.37■□□□□ 0.53
CPSF1-211ENST00000533492 ABRAQ8N0Z2 381 aa18.37■□□□□ 0.53
CPSF1-211ENST00000533492 CEP95Q96GE4 821 aa18.37■□□□□ 0.53
CPSF1-211ENST00000533492 NUP88Q99567 741 aaPredicted RBP18.37■□□□□ 0.53
CPSF1-211ENST00000533492 HELLSQ9NRZ9 838 aa18.37■□□□□ 0.53
CPSF1-211ENST00000533492 MTMR4Q9NYA4 1195 aa18.37■□□□□ 0.53
CPSF1-211ENST00000533492 IGKV6D-41A0A0C4DH26 115 aa18.36■□□□□ 0.53
CPSF1-211ENST00000533492 TRIM6-TRIM34B2RNG4 842 aa18.36■□□□□ 0.53
CPSF1-211ENST00000533492 TTLL1O95922 423 aa18.36■□□□□ 0.53
CPSF1-211ENST00000533492 NDUFB10O96000 172 aa18.36■□□□□ 0.53
CPSF1-211ENST00000533492 TFAP4Q01664 338 aa18.36■□□□□ 0.53
CPSF1-211ENST00000533492 FAM47AQ5JRC9 791 aa18.36■□□□□ 0.53
CPSF1-211ENST00000533492 LHX8Q68G74 356 aa18.36■□□□□ 0.53
CPSF1-211ENST00000533492 NEDD1Q8NHV4 660 aa18.36■□□□□ 0.53
CPSF1-211ENST00000533492 EXOC6Q8TAG9 804 aa18.36■□□□□ 0.53
CPSF1-211ENST00000533492 MKL1Q969V6 931 aa18.36■□□□□ 0.53
CPSF1-211ENST00000533492 SLF1Q9BQI6 1058 aa18.36■□□□□ 0.53
CPSF1-211ENST00000533492 CTDP1Q9Y5B0 961 aaPredicted RBP18.36■□□□□ 0.53
CPSF1-211ENST00000533492 GREB1LQ9C091 1923 aaPredicted RBP18.35■□□□□ 0.53
CPSF1-211ENST00000533492 A0A0G2JMZ2 1700 aa18.35■□□□□ 0.53
CPSF1-211ENST00000533492 MSCO60682 206 aa18.35■□□□□ 0.53
CPSF1-211ENST00000533492 COBLO75128 1261 aa18.35■□□□□ 0.53
CPSF1-211ENST00000533492 COPB2P35606 906 aa18.35■□□□□ 0.53
CPSF1-211ENST00000533492 MNX1P50219 401 aaPredicted RBP18.35■□□□□ 0.53
CPSF1-211ENST00000533492 OLFML2BQ68BL8 750 aa18.35■□□□□ 0.53
CPSF1-211ENST00000533492 RIOX2Q8IUF8 465 aa18.35■□□□□ 0.53
CPSF1-211ENST00000533492 SMC5Q8IY18 1101 aa18.35■□□□□ 0.53
CPSF1-211ENST00000533492 PRPF38AQ8NAV1 312 aaKnown RBP18.35■□□□□ 0.53
CPSF1-211ENST00000533492 RILPL2Q969X0 211 aa18.35■□□□□ 0.53
CPSF1-211ENST00000533492 MMP19Q99542 508 aa18.35■□□□□ 0.53
CPSF1-211ENST00000533492 DDX20Q9UHI6 824 aaKnown RBP18.35■□□□□ 0.53
CPSF1-211ENST00000533492 KCTD2Q14681 263 aa18.34■□□□□ 0.53
CPSF1-211ENST00000533492 MCMDC2Q4G0Z9 681 aa18.34■□□□□ 0.53
CPSF1-211ENST00000533492 TICAM2Q86XR7 235 aa18.34■□□□□ 0.53
CPSF1-211ENST00000533492 SYNPO2Q9UMS6 1093 aa18.34■□□□□ 0.53
CPSF1-211ENST00000533492 PARP14Q460N5 1801 aa18.34■□□□□ 0.53
CPSF1-211ENST00000533492 MYH4Q9Y623 1939 aa18.33■□□□□ 0.53
CPSF1-211ENST00000533492 COL11A1P12107 1806 aaPredicted RBP18.33■□□□□ 0.53
CPSF1-211ENST00000533492 TSPY2A6NKD2 308 aa18.33■□□□□ 0.52
CPSF1-211ENST00000533492 ZBED4O75132 1171 aa18.33■□□□□ 0.52
CPSF1-211ENST00000533492 IGHDP01880 384 aa18.33■□□□□ 0.52
CPSF1-211ENST00000533492 CTDSPL2Q05D32 466 aa18.33■□□□□ 0.52
CPSF1-211ENST00000533492 PPP4R3BQ5MIZ7 849 aa18.33■□□□□ 0.52
CPSF1-211ENST00000533492 SLFN13Q68D06 897 aa18.33■□□□□ 0.52
CPSF1-211ENST00000533492 CHD1LQ86WJ1 897 aa18.33■□□□□ 0.52
CPSF1-211ENST00000533492 C7orf61Q8IZ16 206 aa18.33■□□□□ 0.52
CPSF1-211ENST00000533492 LRRC47Q8N1G4 583 aaKnown RBP18.33■□□□□ 0.52
CPSF1-211ENST00000533492 ZNF214Q9UL59 606 aaPredicted RBP18.33■□□□□ 0.52
CPSF1-211ENST00000533492 ISY1Q9ULR0 285 aaKnown RBP18.33■□□□□ 0.52
CPSF1-211ENST00000533492 ZNFX1Q9P2E3 1918 aaKnown RBP18.33■□□□□ 0.52
CPSF1-211ENST00000533492 SLC4A3P48751 1232 aa18.32■□□□□ 0.52
CPSF1-211ENST00000533492 VPS53Q5VIR6 699 aa18.32■□□□□ 0.52
CPSF1-211ENST00000533492 SNRNP48Q6IEG0 339 aaKnown RBP18.32■□□□□ 0.52
CPSF1-211ENST00000533492 GMCL1P1Q8NEA9 526 aa18.32■□□□□ 0.52
CPSF1-211ENST00000533492 REPS2Q8NFH8 660 aa18.32■□□□□ 0.52
CPSF1-211ENST00000533492 KIFC2Q96AC6 838 aa18.32■□□□□ 0.52
CPSF1-211ENST00000533492 MAML3Q96JK9 1138 aa18.32■□□□□ 0.52
CPSF1-211ENST00000533492 FAM227BQ96M60 508 aa18.32■□□□□ 0.52
CPSF1-211ENST00000533492 TEX13BQ9BXU2 312 aa18.32■□□□□ 0.52
CPSF1-211ENST00000533492 FEM1BQ9UK73 627 aa18.32■□□□□ 0.52
CPSF1-211ENST00000533492 PLIN4Q96Q06 1357 aa18.31■□□□□ 0.52
CPSF1-211ENST00000533492 ZNF236Q9UL36 1845 aa18.31■□□□□ 0.52
CPSF1-211ENST00000533492 A0A0D9SFI3 127 aa18.31■□□□□ 0.52
CPSF1-211ENST00000533492 FOXP2O15409 715 aa18.31■□□□□ 0.52
CPSF1-211ENST00000533492 RANBP6O60518 1105 aaKnown RBP18.31■□□□□ 0.52
CPSF1-211ENST00000533492 BMP3P12645 472 aa18.31■□□□□ 0.52
CPSF1-211ENST00000533492 CYBAP13498 195 aa18.31■□□□□ 0.52
CPSF1-211ENST00000533492 ALX1Q15699 326 aa18.31■□□□□ 0.52
CPSF1-211ENST00000533492 CPXCR1Q8N123 301 aa18.31■□□□□ 0.52
CPSF1-211ENST00000533492 TRPV1Q8NER1 839 aa18.31■□□□□ 0.52
CPSF1-211ENST00000533492 INCENPQ9NQS7 918 aa18.31■□□□□ 0.52
CPSF1-211ENST00000533492 TOMM22Q9NS69 142 aa18.31■□□□□ 0.52
CPSF1-211ENST00000533492 RBM27Q9P2N5 1060 aaKnown RBP18.31■□□□□ 0.52
CPSF1-211ENST00000533492 STX8Q9UNK0 236 aa18.31■□□□□ 0.52
CPSF1-211ENST00000533492 SUPT16HQ9Y5B9 1047 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms