RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 NR2E3Q9Y5X4 410 aa27.93■■■□□ 2.06
SMPD1-209ENST00000533196 PLIN4Q96Q06 1357 aa27.93■■■□□ 2.06
SMPD1-209ENST00000533196 ZNFX1Q9P2E3 1918 aaKnown RBP27.92■■■□□ 2.06
SMPD1-209ENST00000533196 H0YGN5 161 aa27.92■■■□□ 2.06
SMPD1-209ENST00000533196 PPARAQ07869 468 aa27.92■■■□□ 2.06
SMPD1-209ENST00000533196 MKL1Q969V6 931 aa27.92■■■□□ 2.06
SMPD1-209ENST00000533196 PAWRQ96IZ0 340 aaKnown RBP27.92■■■□□ 2.06
SMPD1-209ENST00000533196 SLC5A4Q9NY91 659 aa27.92■■■□□ 2.06
SMPD1-209ENST00000533196 PLS1Q14651 629 aa27.91■■■□□ 2.06
SMPD1-209ENST00000533196 FAM83BQ5T0W9 1011 aa27.91■■■□□ 2.06
SMPD1-209ENST00000533196 DPP9Q86TI2 863 aa27.91■■■□□ 2.06
SMPD1-209ENST00000533196 NEDD1Q8NHV4 660 aa27.91■■■□□ 2.06
SMPD1-209ENST00000533196 LNPKQ9C0E8 428 aa27.91■■■□□ 2.06
SMPD1-209ENST00000533196 F5H6K3 240 aa27.9■■■□□ 2.06
SMPD1-209ENST00000533196 RAD21O60216 631 aa27.9■■■□□ 2.06
SMPD1-209ENST00000533196 PRDM1O75626 825 aa27.9■■■□□ 2.06
SMPD1-209ENST00000533196 ADORA2AP29274 412 aa27.9■■■□□ 2.06
SMPD1-209ENST00000533196 COPB2P35606 906 aa27.9■■■□□ 2.06
SMPD1-209ENST00000533196 KLRC3Q07444 240 aa27.9■■■□□ 2.06
SMPD1-209ENST00000533196 TMEM132BQ14DG7 1078 aa27.9■■■□□ 2.06
SMPD1-209ENST00000533196 HABP4Q5JVS0 413 aaKnown RBP27.9■■■□□ 2.06
SMPD1-209ENST00000533196 PPP4R3BQ5MIZ7 849 aa27.9■■■□□ 2.06
SMPD1-209ENST00000533196 NBPF3Q9H094 633 aa27.9■■■□□ 2.06
SMPD1-209ENST00000533196 MTMR4Q9NYA4 1195 aa27.9■■■□□ 2.06
SMPD1-209ENST00000533196 CLIP2Q9UDT6 1046 aa27.9■■■□□ 2.06
SMPD1-209ENST00000533196 VWA5AO00534 786 aa27.89■■■□□ 2.06
SMPD1-209ENST00000533196 TTLL1O95922 423 aa27.89■■■□□ 2.06
SMPD1-209ENST00000533196 IGHA2P01877 340 aa27.89■■■□□ 2.06
SMPD1-209ENST00000533196 TSPY3P0CV98 308 aa27.89■■■□□ 2.06
SMPD1-209ENST00000533196 TSPY8P0CW00 308 aa27.89■■■□□ 2.06
SMPD1-209ENST00000533196 OLFML2BQ68BL8 750 aa27.89■■■□□ 2.06
SMPD1-209ENST00000533196 NCAPG2Q86XI2 1143 aa27.89■■■□□ 2.06
SMPD1-209ENST00000533196 RIOX2Q8IUF8 465 aa27.89■■■□□ 2.06
SMPD1-209ENST00000533196 NPLOC4Q8TAT6 608 aa27.89■■■□□ 2.06
SMPD1-209ENST00000533196 FLRT1Q9NZU1 646 aa27.89■■■□□ 2.06
SMPD1-209ENST00000533196 MSCO60682 206 aa27.88■■■□□ 2.05
SMPD1-209ENST00000533196 CCND3P30281 292 aaPredicted RBP27.88■■■□□ 2.05
SMPD1-209ENST00000533196 EXOC6Q8TAG9 804 aa27.88■■■□□ 2.05
SMPD1-209ENST00000533196 CEP95Q96GE4 821 aa27.88■■■□□ 2.05
SMPD1-209ENST00000533196 SLF1Q9BQI6 1058 aa27.88■■■□□ 2.05
SMPD1-209ENST00000533196 FBXO28Q9NVF7 368 aa27.88■■■□□ 2.05
SMPD1-209ENST00000533196 ALPK3Q96L96 1907 aa27.87■■■□□ 2.05
SMPD1-209ENST00000533196 FOXP2O15409 715 aa27.87■■■□□ 2.05
SMPD1-209ENST00000533196 NDUFB10O96000 172 aa27.87■■■□□ 2.05
SMPD1-209ENST00000533196 FCER1AP12319 257 aa27.87■■■□□ 2.05
SMPD1-209ENST00000533196 MNX1P50219 401 aaPredicted RBP27.87■■■□□ 2.05
SMPD1-209ENST00000533196 ALX1Q15699 326 aa27.87■■■□□ 2.05
SMPD1-209ENST00000533196 LHX8Q68G74 356 aa27.87■■■□□ 2.05
SMPD1-209ENST00000533196 SAMD1Q6SPF0 538 aaPredicted RBP27.87■■■□□ 2.05
SMPD1-209ENST00000533196 CCDC129Q6ZRS4 1044 aa27.87■■■□□ 2.05
SMPD1-209ENST00000533196 CHD1LQ86WJ1 897 aa27.87■■■□□ 2.05
SMPD1-209ENST00000533196 DIS3LQ8TF46 1054 aaKnown RBP27.87■■■□□ 2.05
SMPD1-209ENST00000533196 OSBPL3Q9H4L5 887 aa27.87■■■□□ 2.05
SMPD1-209ENST00000533196 FRMPD3Q5JV73 1810 aa27.87■■■□□ 2.05
SMPD1-209ENST00000533196 EVI5O60447 810 aa27.86■■■□□ 2.05
SMPD1-209ENST00000533196 STAT3P40763 770 aa27.86■■■□□ 2.05
SMPD1-209ENST00000533196 NUCB1Q02818 461 aa27.86■■■□□ 2.05
SMPD1-209ENST00000533196 MCMDC2Q4G0Z9 681 aa27.86■■■□□ 2.05
SMPD1-209ENST00000533196 PRPF38AQ8NAV1 312 aaKnown RBP27.86■■■□□ 2.05
SMPD1-209ENST00000533196 GMCL1P1Q8NEA9 526 aa27.86■■■□□ 2.05
SMPD1-209ENST00000533196 REPS2Q8NFH8 660 aa27.86■■■□□ 2.05
SMPD1-209ENST00000533196 ANAPC4Q9UJX5 808 aa27.86■■■□□ 2.05
SMPD1-209ENST00000533196 TFAP4Q01664 338 aa27.85■■■□□ 2.05
SMPD1-209ENST00000533196 B4GALNT3Q6L9W6 998 aa27.85■■■□□ 2.05
SMPD1-209ENST00000533196 C11orf49Q9H6J7 331 aa27.85■■■□□ 2.05
SMPD1-209ENST00000533196 ZNF214Q9UL59 606 aaPredicted RBP27.85■■■□□ 2.05
SMPD1-209ENST00000533196 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.85■■■□□ 2.05
SMPD1-209ENST00000533196 TRIM6-TRIM34B2RNG4 842 aa27.84■■■□□ 2.05
SMPD1-209ENST00000533196 COBLO75128 1261 aa27.84■■■□□ 2.05
SMPD1-209ENST00000533196 IGHDP01880 384 aa27.84■■■□□ 2.05
SMPD1-209ENST00000533196 COLQQ9Y215 455 aaPredicted RBP27.84■■■□□ 2.05
SMPD1-209ENST00000533196 NUP88Q99567 741 aaPredicted RBP27.83■■■□□ 2.05
SMPD1-209ENST00000533196 DDX20Q9UHI6 824 aaKnown RBP27.83■■■□□ 2.05
SMPD1-209ENST00000533196 FEM1BQ9UK73 627 aa27.83■■■□□ 2.05
SMPD1-209ENST00000533196 ATP2A1O14983 1001 aa27.82■■■□□ 2.04
SMPD1-209ENST00000533196 CYBAP13498 195 aa27.82■■■□□ 2.04
SMPD1-209ENST00000533196 CYP2C19P33261 490 aa27.82■■■□□ 2.04
SMPD1-209ENST00000533196 KCTD2Q14681 263 aa27.82■■■□□ 2.04
SMPD1-209ENST00000533196 FAM47AQ5JRC9 791 aa27.82■■■□□ 2.04
SMPD1-209ENST00000533196 VPS53Q5VIR6 699 aa27.82■■■□□ 2.04
SMPD1-209ENST00000533196 PLEKHM2Q8IWE5 1019 aa27.82■■■□□ 2.04
SMPD1-209ENST00000533196 MMP19Q99542 508 aa27.82■■■□□ 2.04
SMPD1-209ENST00000533196 TEX13BQ9BXU2 312 aa27.82■■■□□ 2.04
SMPD1-209ENST00000533196 DIS3Q9Y2L1 958 aaKnown RBP27.82■■■□□ 2.04
SMPD1-209ENST00000533196 TRIOBPQ9H2D6 2365 aa27.82■■■□□ 2.04
SMPD1-209ENST00000533196 ZMYM6O95789 1325 aa27.82■■■□□ 2.04
SMPD1-209ENST00000533196 PLXNA1Q9UIW2 1896 aa27.82■■■□□ 2.04
SMPD1-209ENST00000533196 A0A0D9SFI3 127 aa27.81■■■□□ 2.04
SMPD1-209ENST00000533196 FDX1P10109 184 aa27.81■■■□□ 2.04
SMPD1-209ENST00000533196 FAM227BQ96M60 508 aa27.81■■■□□ 2.04
SMPD1-209ENST00000533196 TSPY2A6NKD2 308 aa27.8■■■□□ 2.04
SMPD1-209ENST00000533196 ORC4O43929 436 aa27.8■■■□□ 2.04
SMPD1-209ENST00000533196 ZBED4O75132 1171 aa27.8■■■□□ 2.04
SMPD1-209ENST00000533196 FGRP09769 529 aa27.8■■■□□ 2.04
SMPD1-209ENST00000533196 COL6A1P12109 1028 aa27.8■■■□□ 2.04
SMPD1-209ENST00000533196 CNGA1P29973 690 aa27.8■■■□□ 2.04
SMPD1-209ENST00000533196 MFAP1P55081 439 aaKnown RBP27.8■■■□□ 2.04
SMPD1-209ENST00000533196 CTDSPL2Q05D32 466 aa27.8■■■□□ 2.04
SMPD1-209ENST00000533196 SLFN13Q68D06 897 aa27.8■■■□□ 2.04
SMPD1-209ENST00000533196 LRRC47Q8N1G4 583 aaKnown RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms